Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
PPM1DO15297 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.76■■□□□ 1.71
PPM1DO15297 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PPM1DO15297 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PPM1DO15297 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PPM1DO15297 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
PPM1DO15297 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PPM1DO15297 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PPM1DO15297 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PPM1DO15297 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.74■■□□□ 1.71
PPM1DO15297 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.74■■□□□ 1.71
PPM1DO15297 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PPM1DO15297 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PPM1DO15297 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PPM1DO15297 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PPM1DO15297 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.73■■□□□ 1.71
PPM1DO15297 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
PPM1DO15297 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PPM1DO15297 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PPM1DO15297 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PPM1DO15297 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PPM1DO15297 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.71■■□□□ 1.71
PPM1DO15297 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.71■■□□□ 1.71
PPM1DO15297 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PPM1DO15297 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PPM1DO15297 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PPM1DO15297 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.69■■□□□ 1.7
PPM1DO15297 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PPM1DO15297 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.68■■□□□ 1.7
PPM1DO15297 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PPM1DO15297 HLA-V-202ENST00000446817 847 ntBASIC25.67■■□□□ 1.7
PPM1DO15297 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PPM1DO15297 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PPM1DO15297 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PPM1DO15297 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PPM1DO15297 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.65■■□□□ 1.7
PPM1DO15297 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
PPM1DO15297 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.64■■□□□ 1.7
PPM1DO15297 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.64■■□□□ 1.7
PPM1DO15297 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PPM1DO15297 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
PPM1DO15297 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PPM1DO15297 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PPM1DO15297 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.63■■□□□ 1.69
PPM1DO15297 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.63■■□□□ 1.69
PPM1DO15297 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PPM1DO15297 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PPM1DO15297 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PPM1DO15297 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PPM1DO15297 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.59■■□□□ 1.69
PPM1DO15297 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.59■■□□□ 1.69
PPM1DO15297 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PPM1DO15297 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PPM1DO15297 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PPM1DO15297 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.57■■□□□ 1.68
PPM1DO15297 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPM1DO15297 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
PPM1DO15297 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PPM1DO15297 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PPM1DO15297 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.53■■□□□ 1.68
PPM1DO15297 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PPM1DO15297 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PPM1DO15297 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PPM1DO15297 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.52■■□□□ 1.68
PPM1DO15297 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.52■■□□□ 1.68
PPM1DO15297 LINC01971-201ENST00000617888 1048 ntBASIC25.52■■□□□ 1.68
PPM1DO15297 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.68
PPM1DO15297 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
PPM1DO15297 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.51■■□□□ 1.67
PPM1DO15297 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.51■■□□□ 1.67
PPM1DO15297 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PPM1DO15297 DUX4L11-201ENST00000611504 1267 ntBASIC25.51■■□□□ 1.67
PPM1DO15297 DUX4L12-201ENST00000614593 1267 ntBASIC25.51■■□□□ 1.67
PPM1DO15297 DUX4L14-201ENST00000621227 1267 ntBASIC25.51■■□□□ 1.67
PPM1DO15297 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.51■■□□□ 1.67
PPM1DO15297 AC010864.1-201ENST00000609407 1511 ntBASIC25.49■■□□□ 1.67
PPM1DO15297 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.48■■□□□ 1.67
PPM1DO15297 MIR3648-2-201ENST00000581792 180 ntBASIC25.48■■□□□ 1.67
PPM1DO15297 MIR3648-1-201ENST00000615959 180 ntBASIC25.48■■□□□ 1.67
PPM1DO15297 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PPM1DO15297 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.47■■□□□ 1.67
PPM1DO15297 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.47■■□□□ 1.67
PPM1DO15297 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.46■■□□□ 1.67
PPM1DO15297 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
PPM1DO15297 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.45■■□□□ 1.67
PPM1DO15297 AC016575.1-201ENST00000607026 382 ntBASIC25.45■■□□□ 1.66
PPM1DO15297 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
PPM1DO15297 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PPM1DO15297 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PPM1DO15297 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PPM1DO15297 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.44■■□□□ 1.66
PPM1DO15297 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.44■■□□□ 1.66
PPM1DO15297 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PPM1DO15297 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
PPM1DO15297 MIR639-201ENST00000384974 98 ntBASIC25.42■■□□□ 1.66
PPM1DO15297 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.42■■□□□ 1.66
PPM1DO15297 CR559946.2-201ENST00000623684 991 ntBASIC25.42■■□□□ 1.66
PPM1DO15297 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PPM1DO15297 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PPM1DO15297 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms