Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
TRANK1O15050 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.54■■■□□ 2.16
TRANK1O15050 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TRANK1O15050 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.53■■■□□ 2.16
TRANK1O15050 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.53■■■□□ 2.16
TRANK1O15050 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRANK1O15050 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
TRANK1O15050 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TRANK1O15050 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TRANK1O15050 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TRANK1O15050 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRANK1O15050 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
TRANK1O15050 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TRANK1O15050 GPX1-201ENST00000419349 1106 ntBASIC28.47■■■□□ 2.15
TRANK1O15050 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.47■■■□□ 2.15
TRANK1O15050 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
TRANK1O15050 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TRANK1O15050 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.15
TRANK1O15050 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.45■■■□□ 2.15
TRANK1O15050 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
TRANK1O15050 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TRANK1O15050 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.45■■■□□ 2.14
TRANK1O15050 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
TRANK1O15050 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
TRANK1O15050 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRANK1O15050 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
TRANK1O15050 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.38■■■□□ 2.13
TRANK1O15050 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.38■■■□□ 2.13
TRANK1O15050 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
TRANK1O15050 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRANK1O15050 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRANK1O15050 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
TRANK1O15050 NTF6A-201ENST00000591175 560 ntBASIC28.36■■■□□ 2.13
TRANK1O15050 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRANK1O15050 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
TRANK1O15050 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.35■■■□□ 2.13
TRANK1O15050 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.35■■■□□ 2.13
TRANK1O15050 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.35■■■□□ 2.13
TRANK1O15050 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRANK1O15050 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRANK1O15050 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRANK1O15050 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.33■■■□□ 2.13
TRANK1O15050 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRANK1O15050 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.33■■■□□ 2.13
TRANK1O15050 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.32■■■□□ 2.12
TRANK1O15050 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRANK1O15050 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRANK1O15050 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.31■■■□□ 2.12
TRANK1O15050 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.3■■■□□ 2.12
TRANK1O15050 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.29■■■□□ 2.12
TRANK1O15050 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
TRANK1O15050 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.28■■■□□ 2.12
TRANK1O15050 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRANK1O15050 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRANK1O15050 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.26■■■□□ 2.11
TRANK1O15050 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
TRANK1O15050 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRANK1O15050 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
TRANK1O15050 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.25■■■□□ 2.11
TRANK1O15050 AC012354.3-201ENST00000623734 483 ntBASIC28.25■■■□□ 2.11
TRANK1O15050 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TRANK1O15050 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.24■■■□□ 2.11
TRANK1O15050 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRANK1O15050 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TRANK1O15050 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRANK1O15050 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRANK1O15050 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRANK1O15050 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
TRANK1O15050 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
TRANK1O15050 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRANK1O15050 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
TRANK1O15050 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.2■■■□□ 2.11
TRANK1O15050 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.2■■■□□ 2.11
TRANK1O15050 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.2■■■□□ 2.1
TRANK1O15050 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
TRANK1O15050 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.19■■■□□ 2.1
TRANK1O15050 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.19■■■□□ 2.1
TRANK1O15050 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.18■■■□□ 2.1
TRANK1O15050 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRANK1O15050 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
TRANK1O15050 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
TRANK1O15050 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRANK1O15050 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.17■■■□□ 2.1
TRANK1O15050 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
TRANK1O15050 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
TRANK1O15050 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.15■■■□□ 2.1
TRANK1O15050 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TRANK1O15050 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.14■■■□□ 2.1
TRANK1O15050 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
TRANK1O15050 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TRANK1O15050 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.12■■■□□ 2.09
TRANK1O15050 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRANK1O15050 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms