Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
CHD2O14647 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC37.85■■■■□ 3.65
CHD2O14647 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
CHD2O14647 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
CHD2O14647 HES6-205ENST00000409356 528 ntTSL 2 BASIC37.82■■■■□ 3.65
CHD2O14647 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC37.82■■■■□ 3.65
CHD2O14647 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
CHD2O14647 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
CHD2O14647 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC37.8■■■■□ 3.64
CHD2O14647 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
CHD2O14647 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
CHD2O14647 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC37.79■■■■□ 3.64
CHD2O14647 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC37.79■■■■□ 3.64
CHD2O14647 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC37.78■■■■□ 3.64
CHD2O14647 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC37.77■■■■□ 3.64
CHD2O14647 CHML-204ENST00000638121 920 ntTSL 2 BASIC37.77■■■■□ 3.64
CHD2O14647 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.63
CHD2O14647 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
CHD2O14647 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
CHD2O14647 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
CHD2O14647 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
CHD2O14647 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
CHD2O14647 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
CHD2O14647 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC37.74■■■■□ 3.63
CHD2O14647 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC37.74■■■■□ 3.63
CHD2O14647 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC37.74■■■■□ 3.63
CHD2O14647 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
CHD2O14647 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
CHD2O14647 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC37.71■■■■□ 3.63
CHD2O14647 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC37.7■■■■□ 3.63
CHD2O14647 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC37.69■■■■□ 3.62
CHD2O14647 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC37.69■■■■□ 3.62
CHD2O14647 EI24-212ENST00000615917 1407 ntTSL 2 BASIC37.69■■■■□ 3.62
CHD2O14647 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
CHD2O14647 GPX1-201ENST00000419349 1106 ntBASIC37.68■■■■□ 3.62
CHD2O14647 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
CHD2O14647 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
CHD2O14647 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
CHD2O14647 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
CHD2O14647 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC37.64■■■■□ 3.62
CHD2O14647 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
CHD2O14647 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC37.63■■■■□ 3.61
CHD2O14647 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
CHD2O14647 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC37.62■■■■□ 3.61
CHD2O14647 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC37.61■■■■□ 3.61
CHD2O14647 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC37.6■■■■□ 3.61
CHD2O14647 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
CHD2O14647 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC37.59■■■■□ 3.61
CHD2O14647 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
CHD2O14647 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC37.59■■■■□ 3.61
CHD2O14647 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
CHD2O14647 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC37.57■■■■□ 3.6
CHD2O14647 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
CHD2O14647 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC37.55■■■■□ 3.6
CHD2O14647 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
CHD2O14647 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
CHD2O14647 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
CHD2O14647 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.59
CHD2O14647 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC37.5■■■■□ 3.59
CHD2O14647 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC37.5■■■■□ 3.59
CHD2O14647 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC37.5■■■■□ 3.59
CHD2O14647 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC37.49■■■■□ 3.59
CHD2O14647 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC37.49■■■■□ 3.59
CHD2O14647 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC37.49■■■■□ 3.59
CHD2O14647 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC37.49■■■■□ 3.59
CHD2O14647 CHST11-202ENST00000546689 756 ntTSL 2 BASIC37.48■■■■□ 3.59
CHD2O14647 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC37.47■■■■□ 3.59
CHD2O14647 RNF126P1-201ENST00000567452 1320 ntBASIC37.47■■■■□ 3.59
CHD2O14647 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC37.46■■■■□ 3.59
CHD2O14647 TPT1-202ENST00000379055 948 ntTSL 2 BASIC37.46■■■■□ 3.59
CHD2O14647 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC37.46■■■■□ 3.59
CHD2O14647 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC37.45■■■■□ 3.59
CHD2O14647 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC37.45■■■■□ 3.59
CHD2O14647 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC37.44■■■■□ 3.58
CHD2O14647 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC37.42■■■■□ 3.58
CHD2O14647 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC37.42■■■■□ 3.58
CHD2O14647 NTF6A-201ENST00000591175 560 ntBASIC37.42■■■■□ 3.58
CHD2O14647 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC37.41■■■■□ 3.58
CHD2O14647 LINC00273-201ENST00000539813 1452 ntBASIC37.41■■■■□ 3.58
CHD2O14647 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
CHD2O14647 AC012354.3-201ENST00000623734 483 ntBASIC37.4■■■■□ 3.58
CHD2O14647 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
CHD2O14647 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC37.35■■■■□ 3.57
CHD2O14647 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
CHD2O14647 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC37.34■■■■□ 3.57
CHD2O14647 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
CHD2O14647 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC37.34■■■■□ 3.57
CHD2O14647 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC37.34■■■■□ 3.57
CHD2O14647 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC37.32■■■■□ 3.57
CHD2O14647 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
CHD2O14647 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC37.3■■■■□ 3.56
CHD2O14647 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC37.3■■■■□ 3.56
CHD2O14647 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
CHD2O14647 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC37.29■■■■□ 3.56
CHD2O14647 CEP120-209ENST00000515110 606 ntTSL 3 BASIC37.29■■■■□ 3.56
CHD2O14647 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
CHD2O14647 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC37.29■■■■□ 3.56
CHD2O14647 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CHD2O14647 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC37.27■■■■□ 3.56
CHD2O14647 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms