Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.67■■□□□ 1.86
CCDC163A0A0D9SF12 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
CCDC163A0A0D9SF12 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC163A0A0D9SF12 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.66■■□□□ 1.86
CCDC163A0A0D9SF12 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
CCDC163A0A0D9SF12 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC163A0A0D9SF12 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.65■■□□□ 1.86
CCDC163A0A0D9SF12 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CCDC163A0A0D9SF12 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC163A0A0D9SF12 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC163A0A0D9SF12 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.61■■□□□ 1.85
CCDC163A0A0D9SF12 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC163A0A0D9SF12 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.6■■□□□ 1.85
CCDC163A0A0D9SF12 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.59■■□□□ 1.85
CCDC163A0A0D9SF12 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC163A0A0D9SF12 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC163A0A0D9SF12 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC163A0A0D9SF12 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC163A0A0D9SF12 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC163A0A0D9SF12 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC163A0A0D9SF12 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC163A0A0D9SF12 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC163A0A0D9SF12 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC163A0A0D9SF12 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC163A0A0D9SF12 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC163A0A0D9SF12 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC163A0A0D9SF12 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC163A0A0D9SF12 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.56■■□□□ 1.84
CCDC163A0A0D9SF12 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.55■■□□□ 1.84
CCDC163A0A0D9SF12 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CCDC163A0A0D9SF12 RARRES2P2-201ENST00000394842 485 ntBASIC26.54■■□□□ 1.84
CCDC163A0A0D9SF12 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC163A0A0D9SF12 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC163A0A0D9SF12 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.53■■□□□ 1.84
CCDC163A0A0D9SF12 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CCDC163A0A0D9SF12 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.51■■□□□ 1.83
CCDC163A0A0D9SF12 ABHD17AP5-201ENST00000580133 923 ntBASIC26.5■■□□□ 1.83
CCDC163A0A0D9SF12 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.5■■□□□ 1.83
CCDC163A0A0D9SF12 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
CCDC163A0A0D9SF12 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC163A0A0D9SF12 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
CCDC163A0A0D9SF12 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC163A0A0D9SF12 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.47■■□□□ 1.83
CCDC163A0A0D9SF12 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC163A0A0D9SF12 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC163A0A0D9SF12 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC163A0A0D9SF12 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC163A0A0D9SF12 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.44■■□□□ 1.82
CCDC163A0A0D9SF12 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC163A0A0D9SF12 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
CCDC163A0A0D9SF12 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CCDC163A0A0D9SF12 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.42■■□□□ 1.82
CCDC163A0A0D9SF12 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.42■■□□□ 1.82
CCDC163A0A0D9SF12 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.42■■□□□ 1.82
CCDC163A0A0D9SF12 RNF126P1-201ENST00000567452 1320 ntBASIC26.42■■□□□ 1.82
CCDC163A0A0D9SF12 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCDC163A0A0D9SF12 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.42■■□□□ 1.82
CCDC163A0A0D9SF12 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC163A0A0D9SF12 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC163A0A0D9SF12 GPX1-201ENST00000419349 1106 ntBASIC26.41■■□□□ 1.82
CCDC163A0A0D9SF12 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
CCDC163A0A0D9SF12 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC163A0A0D9SF12 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC163A0A0D9SF12 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.39■■□□□ 1.82
CCDC163A0A0D9SF12 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC163A0A0D9SF12 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC163A0A0D9SF12 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC163A0A0D9SF12 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC163A0A0D9SF12 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC163A0A0D9SF12 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC163A0A0D9SF12 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC163A0A0D9SF12 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC163A0A0D9SF12 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC163A0A0D9SF12 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC163A0A0D9SF12 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CCDC163A0A0D9SF12 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC163A0A0D9SF12 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC163A0A0D9SF12 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CCDC163A0A0D9SF12 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
CCDC163A0A0D9SF12 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CCDC163A0A0D9SF12 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC163A0A0D9SF12 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CCDC163A0A0D9SF12 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC163A0A0D9SF12 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.33■■□□□ 1.81
CCDC163A0A0D9SF12 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC163A0A0D9SF12 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CCDC163A0A0D9SF12 LINC00273-201ENST00000539813 1452 ntBASIC26.33■■□□□ 1.81
CCDC163A0A0D9SF12 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CCDC163A0A0D9SF12 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
CCDC163A0A0D9SF12 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
CCDC163A0A0D9SF12 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC163A0A0D9SF12 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC163A0A0D9SF12 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.31■■□□□ 1.8
CCDC163A0A0D9SF12 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC163A0A0D9SF12 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC163A0A0D9SF12 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.3■■□□□ 1.8
CCDC163A0A0D9SF12 AC120057.4-201ENST00000624722 1615 ntBASIC26.28■■□□□ 1.8
CCDC163A0A0D9SF12 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC163A0A0D9SF12 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC163A0A0D9SF12 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms