Protein–RNA interactions for Protein: A0A0B4J2D9

IGKV1D-13, Immunoglobulin kappa variable 1D-13, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-13A0A0B4J2D9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
IGKV1D-13A0A0B4J2D9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IGKV1D-13A0A0B4J2D9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.72■■□□□ 1.07
IGKV1D-13A0A0B4J2D9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
IGKV1D-13A0A0B4J2D9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
IGKV1D-13A0A0B4J2D9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
IGKV1D-13A0A0B4J2D9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.68■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.68■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.68■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.67■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IGKV1D-13A0A0B4J2D9 DRD5P2-201ENST00000421395 2012 ntBASIC21.64■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.63■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.62■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 AC010864.1-201ENST00000609407 1511 ntBASIC21.61■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.61■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.6■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
IGKV1D-13A0A0B4J2D9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
IGKV1D-13A0A0B4J2D9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.51■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.51■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.51■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.5■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.49■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.48■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.47■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
IGKV1D-13A0A0B4J2D9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.44■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.43■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.42■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 RARRES2P7-201ENST00000567349 469 ntBASIC21.42■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 SETD8P1-201ENST00000623146 1180 ntBASIC21.41■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.4■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 AL121749.1-202ENST00000609313 2153 ntBASIC21.4■■□□□ 1.02
IGKV1D-13A0A0B4J2D9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
IGKV1D-13A0A0B4J2D9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IGKV1D-13A0A0B4J2D9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IGKV1D-13A0A0B4J2D9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms