Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YEL050W-AYEL050W-A 192 nt1.97□□□□□ -2.09
YNL040WP53960 IGO1YNL157W 507 nt1.97□□□□□ -2.09
YNL040WP53960 YOL159C-AYOL159C-A 273 nt1.97□□□□□ -2.09
YNL040WP53960 TAZ1YPR140W 1146 nt1.97□□□□□ -2.09
YNL040WP53960 DIS3YOL021C 3006 nt1.96□□□□□ -2.1
YNL040WP53960 YCR108CYCR108C 192 nt1.96□□□□□ -2.1
YNL040WP53960 snR9snR9 187 nt1.96□□□□□ -2.1
YNL040WP53960 YDR018CYDR018C 1191 nt1.96□□□□□ -2.1
YNL040WP53960 FAR7YFR008W 666 nt1.96□□□□□ -2.1
YNL040WP53960 YGR242WYGR242W 309 nt1.96□□□□□ -2.1
YNL040WP53960 FYV4YHR059W 393 nt1.96□□□□□ -2.1
YNL040WP53960 PRP21YJL203W 843 nt1.96□□□□□ -2.1
YNL040WP53960 ACF4YJR083C 930 nt1.96□□□□□ -2.1
YNL040WP53960 GIM3YNL153C 390 nt1.96□□□□□ -2.1
YNL040WP53960 YNR021WYNR021W 1215 nt1.96□□□□□ -2.1
YNL040WP53960 YOL029CYOL029C 606 nt1.96□□□□□ -2.1
YNL040WP53960 YOL150CYOL150C 312 nt1.96□□□□□ -2.1
YNL040WP53960 YPR147CYPR147C 915 nt1.96□□□□□ -2.1
YNL040WP53960 AFI1YOR129C 2682 nt1.96□□□□□ -2.1
YNL040WP53960 GCN2YDR283C 4980 nt1.96□□□□□ -2.1
YNL040WP53960 RGA2YDR379W 3030 nt1.96□□□□□ -2.1
YNL040WP53960 YMR045CYMR045C 5268 nt1.96□□□□□ -2.1
YNL040WP53960 SDL1YIL167W 633 nt1.95□□□□□ -2.1
YNL040WP53960 SHE4YOR035C 2370 nt1.95□□□□□ -2.1
YNL040WP53960 YJL016WYJL016W 1686 nt1.95□□□□□ -2.1
YNL040WP53960 SNF12YNR023W 1701 nt1.94□□□□□ -2.1
YNL040WP53960 PSO2YMR137C 1986 nt1.94□□□□□ -2.1
YNL040WP53960 VPS74YDR372C 1038 nt1.94□□□□□ -2.1
YNL040WP53960 TMA20YER007C-A 546 nt1.94□□□□□ -2.1
YNL040WP53960 YFL012W-AYFL012W-A 375 nt1.94□□□□□ -2.1
YNL040WP53960 YHR054CYHR054C 1065 nt1.94□□□□□ -2.1
YNL040WP53960 YJR087WYJR087W 351 nt1.94□□□□□ -2.1
YNL040WP53960 PAU8YAL068C 363 nt1.94□□□□□ -2.1
YNL040WP53960 YNL150WYNL150W 408 nt1.94□□□□□ -2.1
YNL040WP53960 PAU20YOL161C 363 nt1.94□□□□□ -2.1
YNL040WP53960 CSM4YPL200W 471 nt1.94□□□□□ -2.1
YNL040WP53960 TRM7YBR061C 933 nt1.94□□□□□ -2.1
YNL040WP53960 NSL1YPL233W 651 nt1.94□□□□□ -2.1
YNL040WP53960 ARR2YPR200C 393 nt1.94□□□□□ -2.1
YNL040WP53960 CBF2YGR140W 2871 nt1.94□□□□□ -2.1
YNL040WP53960 YDR461C-AYDR461C-A 243 nt1.93□□□□□ -2.1
YNL040WP53960 ATP18YML081C-A 180 nt1.93□□□□□ -2.1
YNL040WP53960 YMR144WYMR144W 1029 nt1.93□□□□□ -2.1
YNL040WP53960 OST2YOR103C 393 nt1.93□□□□□ -2.1
YNL040WP53960 ECM5YMR176W 4236 nt1.93□□□□□ -2.1
YNL040WP53960 UBR1YGR184C 5853 nt1.92□□□□□ -2.1
YNL040WP53960 GPI8YDR331W 1236 nt1.92□□□□□ -2.1
YNL040WP53960 UTP30YKR060W 825 nt1.92□□□□□ -2.1
YNL040WP53960 RPS17AYML024W 411 nt1.92□□□□□ -2.1
YNL040WP53960 YNR025CYNR025C 360 nt1.92□□□□□ -2.1
YNL040WP53960 YBR277CYBR277C 402 nt1.92□□□□□ -2.1
YNL040WP53960 RRP6YOR001W 2202 nt1.92□□□□□ -2.1
YNL040WP53960 YGR228WYGR228W 345 nt1.91□□□□□ -2.1
YNL040WP53960 TAP42YMR028W 1101 nt1.91□□□□□ -2.1
YNL040WP53960 YMR272W-BYMR272W-B 108 nt1.91□□□□□ -2.1
YNL040WP53960 SWM2YNR004W 441 nt1.91□□□□□ -2.1
YNL040WP53960 YOR392WYOR392W 444 nt1.91□□□□□ -2.1
YNL040WP53960 RTP1YMR185W 2946 nt1.91□□□□□ -2.1
YNL040WP53960 ECM25YJL201W 1800 nt1.9□□□□□ -2.11
YNL040WP53960 YGL042CYGL042C 306 nt1.9□□□□□ -2.11
YNL040WP53960 SLX9YGR081C 633 nt1.9□□□□□ -2.11
YNL040WP53960 CSE4YKL049C 690 nt1.9□□□□□ -2.11
YNL040WP53960 ATG38YLR211C 681 nt1.9□□□□□ -2.11
YNL040WP53960 YNL179CYNL179C 438 nt1.9□□□□□ -2.11
YNL040WP53960 RIO2YNL207W 1278 nt1.9□□□□□ -2.11
YNL040WP53960 YNL303WYNL303W 348 nt1.9□□□□□ -2.11
YNL040WP53960 YPL034WYPL034W 498 nt1.9□□□□□ -2.11
YNL040WP53960 snR189snR189 189 nt1.9□□□□□ -2.11
YNL040WP53960 MSL5YLR116W 1431 nt1.9□□□□□ -2.11
YNL040WP53960 GIP3YPL137C 3831 nt1.9□□□□□ -2.11
YNL040WP53960 STD1YOR047C 1335 nt1.9□□□□□ -2.11
YNL040WP53960 YNL034WYNL034W 1839 nt1.89□□□□□ -2.11
YNL040WP53960 IRC2YDR112W 309 nt1.89□□□□□ -2.11
YNL040WP53960 YDR199WYDR199W 366 nt1.89□□□□□ -2.11
YNL040WP53960 PRS3YHL011C 963 nt1.89□□□□□ -2.11
YNL040WP53960 YLR302CYLR302C 363 nt1.89□□□□□ -2.11
YNL040WP53960 HHT2YNL031C 411 nt1.89□□□□□ -2.11
YNL040WP53960 CDC60YPL160W 3273 nt1.88□□□□□ -2.11
YNL040WP53960 YDL009CYDL009C 324 nt1.88□□□□□ -2.11
YNL040WP53960 UBC5YDR059C 447 nt1.88□□□□□ -2.11
YNL040WP53960 VMA21YGR105W 234 nt1.88□□□□□ -2.11
YNL040WP53960 SCEIQ0160 708 nt1.88□□□□□ -2.11
YNL040WP53960 DFG10YIL049W 762 nt1.88□□□□□ -2.11
YNL040WP53960 LSM2YBL026W 288 nt1.88□□□□□ -2.11
YNL040WP53960 COS111YBR203W 2775 nt1.87□□□□□ -2.11
YNL040WP53960 RRI2YOL117W 1938 nt1.87□□□□□ -2.11
YNL040WP53960 SSF1YHR066W 1362 nt1.87□□□□□ -2.11
YNL040WP53960 MPH1YIR002C 2982 nt1.87□□□□□ -2.11
YNL040WP53960 OCA6YDR067C 675 nt1.87□□□□□ -2.11
YNL040WP53960 YFR056CYFR056C 369 nt1.87□□□□□ -2.11
YNL040WP53960 YLR154W-AYLR154W-A 186 nt1.87□□□□□ -2.11
YNL040WP53960 GMC2YLR445W 567 nt1.87□□□□□ -2.11
YNL040WP53960 ERG29YMR134W 714 nt1.87□□□□□ -2.11
YNL040WP53960 VTI1YMR197C 654 nt1.87□□□□□ -2.11
YNL040WP53960 YMR304C-AYMR304C-A 351 nt1.87□□□□□ -2.11
YNL040WP53960 PEX8YGR077C 1770 nt1.87□□□□□ -2.11
YNL040WP53960 YPR097WYPR097W 3222 nt1.87□□□□□ -2.11
YNL040WP53960 VPS34YLR240W 2628 nt1.87□□□□□ -2.11
YNL040WP53960 SSF2YDR312W 1362 nt1.86□□□□□ -2.11
YNL040WP53960 YDL187CYDL187C 330 nt1.86□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 36 ms