RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C MTC1P47018 478 aaKnown RBP10.32□□□□□ -0.76
SHE4YOR035C DRS1P32892 752 aaKnown RBP10.3□□□□□ -0.76
SHE4YOR035C BFR2Q06631 534 aaKnown RBP8.86□□□□□ -0.99
SHE4YOR035C DIP2Q12220 943 aaPredicted RBP8.78□□□□□ -1
SHE4YOR035C FAP1P53971 965 aa8.65□□□□□ -1.02
SHE4YOR035C AVT3P36062 692 aa8.6□□□□□ -1.03
SHE4YOR035C ISW2Q08773 1120 aa8.44□□□□□ -1.06
SHE4YOR035C PRI1P10363 409 aa8.34□□□□□ -1.07
SHE4YOR035C RPG1P38249 964 aaKnown RBP8.34□□□□□ -1.07
SHE4YOR035C RSE1Q04693 1361 aaKnown RBP8.33□□□□□ -1.08
SHE4YOR035C AAD16Q02895 342 aa8.25□□□□□ -1.09
SHE4YOR035C TFA1P36100 482 aa8.22□□□□□ -1.09
SHE4YOR035C PRY3P47033 881 aa8.1□□□□□ -1.11
SHE4YOR035C RPL17AP05740 184 aaKnown RBP8.04□□□□□ -1.12
SHE4YOR035C RPL17BP46990 184 aaKnown RBP8.04□□□□□ -1.12
SHE4YOR035C TSR3Q12094 313 aaKnown RBP7.96□□□□□ -1.13
SHE4YOR035C REB1P21538 810 aa7.96□□□□□ -1.14
SHE4YOR035C SPT21P35209 758 aa7.68□□□□□ -1.18
SHE4YOR035C MRPL32P25348 183 aa7.65□□□□□ -1.18
SHE4YOR035C HAA1Q12753 694 aaKnown RBP7.61□□□□□ -1.19
SHE4YOR035C YCK3P39962 524 aa7.58□□□□□ -1.2
SHE4YOR035C RIM101P33400 625 aa7.55□□□□□ -1.2
SHE4YOR035C YKR023WP36119 530 aaKnown RBP7.46□□□□□ -1.21
SHE4YOR035C HOP09932 586 aa7.35□□□□□ -1.23
SHE4YOR035C CDC27P38042 758 aa7.35□□□□□ -1.23
SHE4YOR035C OXP1P28273 1286 aa7.33□□□□□ -1.24
SHE4YOR035C TFC8Q12308 588 aa7.32□□□□□ -1.24
SHE4YOR035C DCD1P06773 312 aa7.29□□□□□ -1.24
SHE4YOR035C PTP3P40048 928 aa7.28□□□□□ -1.24
SHE4YOR035C YIL055CP40523 627 aaKnown RBP7.27□□□□□ -1.25
SHE4YOR035C YAH1Q12184 172 aaKnown RBP7.26□□□□□ -1.25
SHE4YOR035C SSP1P38871 571 aa7.19□□□□□ -1.26
SHE4YOR035C YGL015CP33199 130 aa7.14□□□□□ -1.27
SHE4YOR035C RSM7P47150 247 aa7.13□□□□□ -1.27
SHE4YOR035C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27 RIP-Chip
SHE4YOR035C YLR271WQ06152 274 aa7.11□□□□□ -1.27
SHE4YOR035C BCH2P36122 765 aa7.1□□□□□ -1.27
SHE4YOR035C MAP2P38174 421 aaKnown RBP7.06□□□□□ -1.28
SHE4YOR035C UBP10P53874 792 aaPredicted RBP7.05□□□□□ -1.28
SHE4YOR035C SCY1P53009 804 aa7.05□□□□□ -1.28
SHE4YOR035C AI2P03876 854 aa7.01□□□□□ -1.29
SHE4YOR035C EPS1P40557 701 aa6.99□□□□□ -1.29
SHE4YOR035C BBC1P47068 1157 aa6.99□□□□□ -1.29
SHE4YOR035C MGA2P40578 1113 aa6.95□□□□□ -1.3
SHE4YOR035C BDF1P35817 686 aa6.93□□□□□ -1.3
SHE4YOR035C PSD2P53037 1138 aaKnown RBP6.93□□□□□ -1.3
SHE4YOR035C SLX5P32828 619 aaKnown RBP6.91□□□□□ -1.3
SHE4YOR035C CST9Q06032 482 aa6.89□□□□□ -1.31
SHE4YOR035C RQC2Q12532 1038 aaKnown RBP6.88□□□□□ -1.31
SHE4YOR035C MRM1P25270 412 aa6.81□□□□□ -1.32
SHE4YOR035C TIF4632P39936 914 aaKnown RBP6.79□□□□□ -1.32
SHE4YOR035C DMA1P38823 416 aa6.75□□□□□ -1.33
SHE4YOR035C TGL3P40308 642 aa6.71□□□□□ -1.34
SHE4YOR035C RTG3P38165 486 aa6.69□□□□□ -1.34
SHE4YOR035C RCR1P38212 213 aa6.67□□□□□ -1.34
SHE4YOR035C RAM2P29703 316 aa6.62□□□□□ -1.35
SHE4YOR035C VPS29P38759 282 aa6.61□□□□□ -1.35
SHE4YOR035C YAP5P40574 245 aa6.59□□□□□ -1.35
SHE4YOR035C YMR1P47147 688 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
SHE4YOR035C NSR1P27476 414 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
SHE4YOR035C YOR238WQ08634 303 aa6.57□□□□□ -1.36
SHE4YOR035C YFR006WP43590 535 aa6.55□□□□□ -1.36
SHE4YOR035C PIB1Q06651 286 aa6.55□□□□□ -1.36
SHE4YOR035C DBP1P24784 617 aaKnown RBP6.54□□□□□ -1.36
SHE4YOR035C STS1P38637 319 aa6.53□□□□□ -1.36
SHE4YOR035C MAK11P20484 414 aaKnown RBP6.52□□□□□ -1.37
SHE4YOR035C MST1P07236 462 aa6.47□□□□□ -1.37
SHE4YOR035C GTT3P39996 337 aa6.46□□□□□ -1.37
SHE4YOR035C MIF2P35201 549 aa6.46□□□□□ -1.38
SHE4YOR035C SET1P38827 1080 aaKnown RBP6.46□□□□□ -1.38
SHE4YOR035C COQ8P27697 501 aa6.45□□□□□ -1.38
SHE4YOR035C VMA1P17255 1071 aaKnown RBP6.42□□□□□ -1.38
SHE4YOR035C EDS1P38073 919 aa6.4□□□□□ -1.38
SHE4YOR035C SAS10Q12136 610 aaPredicted RBP6.37□□□□□ -1.39
SHE4YOR035C WSC3Q12215 556 aa6.37□□□□□ -1.39
SHE4YOR035C PTC3P34221 468 aaKnown RBP6.36□□□□□ -1.39
SHE4YOR035C UBP9P39967 754 aa6.36□□□□□ -1.39
SHE4YOR035C IFH1P39520 1085 aa6.35□□□□□ -1.39
SHE4YOR035C NOP53Q12080 455 aaKnown RBP6.35□□□□□ -1.39
SHE4YOR035C VPS70P47161 811 aa6.34□□□□□ -1.39
SHE4YOR035C SAM3Q08986 587 aa6.34□□□□□ -1.39
SHE4YOR035C YPR148CQ06523 435 aa6.32□□□□□ -1.4
SHE4YOR035C YOL036WQ08206 761 aa6.32□□□□□ -1.4
SHE4YOR035C GRE2Q12068 342 aaKnown RBP6.32□□□□□ -1.4
SHE4YOR035C GYP5Q12344 894 aa6.32□□□□□ -1.4
SHE4YOR035C YBL029C-AQ3E756 94 aa6.32□□□□□ -1.4
SHE4YOR035C SET4P42948 560 aa6.31□□□□□ -1.4
SHE4YOR035C ATH1P48016 1211 aa6.31□□□□□ -1.4
SHE4YOR035C MSB4Q12317 492 aa6.28□□□□□ -1.4
SHE4YOR035C DCW1P36091 449 aa6.27□□□□□ -1.41
SHE4YOR035C VNX1P42839 908 aa6.27□□□□□ -1.41
SHE4YOR035C GUT1P32190 709 aa6.26□□□□□ -1.41
SHE4YOR035C CKB1P43639 278 aa6.26□□□□□ -1.41
SHE4YOR035C ABP1P15891 592 aaKnown RBP6.25□□□□□ -1.41
SHE4YOR035C BUD31P25337 157 aaPredicted RBP6.25□□□□□ -1.41
SHE4YOR035C SPP1Q03012 353 aa6.25□□□□□ -1.41
SHE4YOR035C TIF11P38912 153 aaKnown RBP6.23□□□□□ -1.41
SHE4YOR035C HTA1P04911 132 aaKnown RBP6.22□□□□□ -1.41
SHE4YOR035C HTA2P04912 132 aa6.22□□□□□ -1.41
SHE4YOR035C EAP1P36041 632 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 112 ms