RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W MTC1P47018 478 aaKnown RBP10.31□□□□□ -0.76
RRI2YOL117W DRS1P32892 752 aaKnown RBP10.11□□□□□ -0.79
RRI2YOL117W DIP2Q12220 943 aaPredicted RBP8.7□□□□□ -1.02
RRI2YOL117W BFR2Q06631 534 aaKnown RBP8.66□□□□□ -1.02
RRI2YOL117W FAP1P53971 965 aa8.64□□□□□ -1.03
RRI2YOL117W AVT3P36062 692 aa8.6□□□□□ -1.03
RRI2YOL117W PRI1P10363 409 aa8.41□□□□□ -1.06
RRI2YOL117W ISW2Q08773 1120 aa8.38□□□□□ -1.07
RRI2YOL117W RPG1P38249 964 aaKnown RBP8.3□□□□□ -1.08
RRI2YOL117W AAD16Q02895 342 aa8.25□□□□□ -1.09
RRI2YOL117W RSE1Q04693 1361 aaKnown RBP8.24□□□□□ -1.09
RRI2YOL117W PRY3P47033 881 aa8.21□□□□□ -1.1
RRI2YOL117W TFA1P36100 482 aa8.09□□□□□ -1.11
RRI2YOL117W RPL17AP05740 184 aaKnown RBP7.94□□□□□ -1.14
RRI2YOL117W RPL17BP46990 184 aaKnown RBP7.94□□□□□ -1.14
RRI2YOL117W TSR3Q12094 313 aaKnown RBP7.93□□□□□ -1.14
RRI2YOL117W REB1P21538 810 aa7.82□□□□□ -1.16
RRI2YOL117W YCK3P39962 524 aa7.78□□□□□ -1.16
RRI2YOL117W SPT21P35209 758 aa7.72□□□□□ -1.17
RRI2YOL117W HAA1Q12753 694 aaKnown RBP7.62□□□□□ -1.19
RRI2YOL117W MRPL32P25348 183 aa7.59□□□□□ -1.19
RRI2YOL117W RIM101P33400 625 aa7.57□□□□□ -1.2
RRI2YOL117W YKR023WP36119 530 aaKnown RBP7.51□□□□□ -1.21
RRI2YOL117W CDC27P38042 758 aa7.38□□□□□ -1.23
RRI2YOL117W OXP1P28273 1286 aa7.34□□□□□ -1.23
RRI2YOL117W TFC8Q12308 588 aa7.34□□□□□ -1.23
RRI2YOL117W HOP09932 586 aa7.3□□□□□ -1.24
RRI2YOL117W DCD1P06773 312 aa7.25□□□□□ -1.25
RRI2YOL117W YGL015CP33199 130 aa7.16□□□□□ -1.26
RRI2YOL117W YIL055CP40523 627 aaKnown RBP7.13□□□□□ -1.27
RRI2YOL117W BCH2P36122 765 aa7.12□□□□□ -1.27
RRI2YOL117W SSP1P38871 571 aa7.11□□□□□ -1.27
RRI2YOL117W PTP3P40048 928 aa7.1□□□□□ -1.27
RRI2YOL117W YAH1Q12184 172 aaKnown RBP7.09□□□□□ -1.27
RRI2YOL117W UBP10P53874 792 aaPredicted RBP7.08□□□□□ -1.28
RRI2YOL117W YLR271WQ06152 274 aa7.08□□□□□ -1.28
RRI2YOL117W RSM7P47150 247 aa7.07□□□□□ -1.28
RRI2YOL117W BUD31P25337 157 aaPredicted RBP7.07□□□□□ -1.28
RRI2YOL117W MAP2P38174 421 aaKnown RBP7.07□□□□□ -1.28
RRI2YOL117W SCY1P53009 804 aa6.99□□□□□ -1.29
RRI2YOL117W AI2P03876 854 aa6.96□□□□□ -1.3
RRI2YOL117W EPS1P40557 701 aa6.95□□□□□ -1.3
RRI2YOL117W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
RRI2YOL117W BDF1P35817 686 aa6.93□□□□□ -1.3
RRI2YOL117W PSD2P53037 1138 aaKnown RBP6.93□□□□□ -1.3
RRI2YOL117W BBC1P47068 1157 aa6.89□□□□□ -1.31
RRI2YOL117W MGA2P40578 1113 aa6.88□□□□□ -1.31
RRI2YOL117W SLX5P32828 619 aaKnown RBP6.87□□□□□ -1.31
RRI2YOL117W CST9Q06032 482 aa6.86□□□□□ -1.31
RRI2YOL117W TGL3P40308 642 aa6.76□□□□□ -1.33
RRI2YOL117W TIF4632P39936 914 aaKnown RBP6.74□□□□□ -1.33
RRI2YOL117W MRM1P25270 412 aa6.73□□□□□ -1.33
RRI2YOL117W NSR1P27476 414 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
RRI2YOL117W RCR1P38212 213 aa6.64□□□□□ -1.35
RRI2YOL117W RTG3P38165 486 aa6.64□□□□□ -1.35
RRI2YOL117W VPS29P38759 282 aa6.63□□□□□ -1.35
RRI2YOL117W MST1P07236 462 aa6.59□□□□□ -1.35
RRI2YOL117W RAM2P29703 316 aa6.59□□□□□ -1.35
RRI2YOL117W SIS1P25294 352 aaKnown RBP6.58□□□□□ -1.36
RRI2YOL117W DMA1P38823 416 aa6.55□□□□□ -1.36
RRI2YOL117W YAP5P40574 245 aa6.55□□□□□ -1.36
RRI2YOL117W YMR1P47147 688 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
RRI2YOL117W STS1P38637 319 aa6.52□□□□□ -1.37
RRI2YOL117W RQC2Q12532 1038 aaKnown RBP6.52□□□□□ -1.37
RRI2YOL117W YOR238WQ08634 303 aa6.52□□□□□ -1.37
RRI2YOL117W MAK11P20484 414 aaKnown RBP6.49□□□□□ -1.37
RRI2YOL117W DBP1P24784 617 aaKnown RBP6.49□□□□□ -1.37
RRI2YOL117W YFR006WP43590 535 aa6.46□□□□□ -1.37
RRI2YOL117W PIB1Q06651 286 aa6.44□□□□□ -1.38
RRI2YOL117W VMA1P17255 1071 aaKnown RBP6.4□□□□□ -1.39
RRI2YOL117W COQ8P27697 501 aa6.39□□□□□ -1.39
RRI2YOL117W EDS1P38073 919 aa6.39□□□□□ -1.39
RRI2YOL117W SET1P38827 1080 aaKnown RBP6.38□□□□□ -1.39
RRI2YOL117W SAM3Q08986 587 aa6.38□□□□□ -1.39
RRI2YOL117W NOP53Q12080 455 aaKnown RBP6.36□□□□□ -1.39
RRI2YOL117W SAS10Q12136 610 aaPredicted RBP6.35□□□□□ -1.39
RRI2YOL117W MIF2P35201 549 aa6.34□□□□□ -1.39
RRI2YOL117W PTC3P34221 468 aaKnown RBP6.33□□□□□ -1.4
RRI2YOL117W GTT3P39996 337 aa6.33□□□□□ -1.4
RRI2YOL117W UBP9P39967 754 aa6.32□□□□□ -1.4
RRI2YOL117W YBL029C-AQ3E756 94 aa6.32□□□□□ -1.4
RRI2YOL117W VNX1P42839 908 aa6.31□□□□□ -1.4
RRI2YOL117W YPR148CQ06523 435 aa6.31□□□□□ -1.4
RRI2YOL117W YOL036WQ08206 761 aa6.29□□□□□ -1.4
RRI2YOL117W WSC3Q12215 556 aa6.27□□□□□ -1.41
RRI2YOL117W MSB4Q12317 492 aa6.27□□□□□ -1.41
RRI2YOL117W IFH1P39520 1085 aa6.25□□□□□ -1.41
RRI2YOL117W SET4P42948 560 aa6.25□□□□□ -1.41
RRI2YOL117W GYP5Q12344 894 aa6.25□□□□□ -1.41
RRI2YOL117W GUT1P32190 709 aa6.24□□□□□ -1.41
RRI2YOL117W GRE2Q12068 342 aaKnown RBP6.24□□□□□ -1.41
RRI2YOL117W ABP1P15891 592 aaKnown RBP6.22□□□□□ -1.41
RRI2YOL117W TIF11P38912 153 aaKnown RBP6.22□□□□□ -1.41
RRI2YOL117W SOL3P38858 249 aa6.21□□□□□ -1.41
RRI2YOL117W ATH1P48016 1211 aa6.21□□□□□ -1.41
RRI2YOL117W NST1P53935 1240 aa6.21□□□□□ -1.41
RRI2YOL117W SPP1Q03012 353 aa6.21□□□□□ -1.42
RRI2YOL117W IOC2Q12072 812 aa6.21□□□□□ -1.42
RRI2YOL117W VPS70P47161 811 aa6.2□□□□□ -1.42
RRI2YOL117W EAP1P36041 632 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms