RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W DRS1P32892 752 aaKnown RBP5.5□□□□□ -1.53
CBF2YGR140W BFR2Q06631 534 aaKnown RBP4.98□□□□□ -1.61
CBF2YGR140W MTC1P47018 478 aaKnown RBP4.97□□□□□ -1.61
CBF2YGR140W TFA1P36100 482 aa4.9□□□□□ -1.62
CBF2YGR140W RQC2Q12532 1038 aaKnown RBP4.82□□□□□ -1.64
CBF2YGR140W DIP2Q12220 943 aaPredicted RBP4.49□□□□□ -1.69
CBF2YGR140W AVT3P36062 692 aa4.48□□□□□ -1.69
CBF2YGR140W TAF7Q05021 590 aa4.39□□□□□ -1.71
CBF2YGR140W DMA1P38823 416 aa4.25□□□□□ -1.73
CBF2YGR140W FAP1P53971 965 aa4.2□□□□□ -1.74
CBF2YGR140W RSE1Q04693 1361 aaKnown RBP4.16□□□□□ -1.74
CBF2YGR140W LEO1P38439 464 aa4.08□□□□□ -1.76
CBF2YGR140W PTP3P40048 928 aa4.08□□□□□ -1.76
CBF2YGR140W ISW2Q08773 1120 aa4□□□□□ -1.77
CBF2YGR140W RPL17AP05740 184 aaKnown RBP3.97□□□□□ -1.77
CBF2YGR140W RPL17BP46990 184 aaKnown RBP3.97□□□□□ -1.77
CBF2YGR140W PRY3P47033 881 aa3.94□□□□□ -1.78
CBF2YGR140W REB1P21538 810 aa3.92□□□□□ -1.78
CBF2YGR140W SSP1P38871 571 aa3.91□□□□□ -1.78
CBF2YGR140W LEU3P08638 886 aa3.9□□□□□ -1.78
CBF2YGR140W RPG1P38249 964 aaKnown RBP3.89□□□□□ -1.79
CBF2YGR140W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
CBF2YGR140W AAD16Q02895 342 aa3.84□□□□□ -1.79
CBF2YGR140W PRI1P10363 409 aa3.83□□□□□ -1.8
CBF2YGR140W YAH1Q12184 172 aaKnown RBP3.83□□□□□ -1.8
CBF2YGR140W RIM101P33400 625 aa3.81□□□□□ -1.8
CBF2YGR140W SAS10Q12136 610 aaPredicted RBP3.8□□□□□ -1.8
CBF2YGR140W RPN1P38764 993 aaKnown RBP3.79□□□□□ -1.8
CBF2YGR140W YIL055CP40523 627 aaKnown RBP3.78□□□□□ -1.8
CBF2YGR140W DMA2P53924 522 aa3.77□□□□□ -1.81
CBF2YGR140W SPT21P35209 758 aa3.76□□□□□ -1.81
CBF2YGR140W RLF2Q12495 606 aa3.73□□□□□ -1.81
CBF2YGR140W SPB4P25808 606 aaPredicted RBP3.72□□□□□ -1.81
CBF2YGR140W MGA2P40578 1113 aa3.72□□□□□ -1.81
CBF2YGR140W OXP1P28273 1286 aa3.7□□□□□ -1.82
CBF2YGR140W YLR271WQ06152 274 aa3.69□□□□□ -1.82
CBF2YGR140W HGH1P48362 394 aaKnown RBP3.69□□□□□ -1.82
CBF2YGR140W CKB1P43639 278 aa3.67□□□□□ -1.82
CBF2YGR140W HAA1Q12753 694 aaKnown RBP3.67□□□□□ -1.82
CBF2YGR140W RSM7P47150 247 aa3.66□□□□□ -1.82
CBF2YGR140W AIM44Q99299 758 aa3.65□□□□□ -1.82
CBF2YGR140W TSR3Q12094 313 aaKnown RBP3.65□□□□□ -1.83
CBF2YGR140W YCK3P39962 524 aa3.64□□□□□ -1.83
CBF2YGR140W VPS70P47161 811 aa3.63□□□□□ -1.83
CBF2YGR140W IFH1P39520 1085 aa3.62□□□□□ -1.83
CBF2YGR140W CST9Q06032 482 aa3.61□□□□□ -1.83
CBF2YGR140W SET1P38827 1080 aaKnown RBP3.61□□□□□ -1.83
CBF2YGR140W ABP1P15891 592 aaKnown RBP3.57□□□□□ -1.84
CBF2YGR140W KIN1P13185 1064 aa3.57□□□□□ -1.84
CBF2YGR140W BBC1P47068 1157 aa3.56□□□□□ -1.84
CBF2YGR140W YNR021WP53723 404 aaKnown RBP3.56□□□□□ -1.84
CBF2YGR140W AI2P03876 854 aa3.55□□□□□ -1.84
CBF2YGR140W YPR148CQ06523 435 aa3.55□□□□□ -1.84
CBF2YGR140W PSD2P53037 1138 aaKnown RBP3.54□□□□□ -1.84
CBF2YGR140W PBS2P08018 668 aa3.54□□□□□ -1.84
CBF2YGR140W RAM2P29703 316 aa3.54□□□□□ -1.84
CBF2YGR140W YKR023WP36119 530 aaKnown RBP3.53□□□□□ -1.84
CBF2YGR140W DSF2P38213 736 aa3.53□□□□□ -1.84
CBF2YGR140W HOP09932 586 aa3.53□□□□□ -1.85
CBF2YGR140W GLC3P32775 704 aa3.52□□□□□ -1.85
CBF2YGR140W MRPL32P25348 183 aa3.52□□□□□ -1.85
CBF2YGR140W MAM3Q12296 706 aa3.52□□□□□ -1.85
CBF2YGR140W AIM7Q12156 149 aa3.5□□□□□ -1.85
CBF2YGR140W YML020WQ03722 664 aa3.5□□□□□ -1.85
CBF2YGR140W IES2P40154 320 aa3.49□□□□□ -1.85
CBF2YGR140W ATF2P53296 535 aa3.49□□□□□ -1.85
CBF2YGR140W TFC8Q12308 588 aa3.49□□□□□ -1.85
CBF2YGR140W MAK21Q12176 1025 aaKnown RBP3.49□□□□□ -1.85
CBF2YGR140W SSA1P10591 642 aaKnown RBP3.48□□□□□ -1.85
CBF2YGR140W MRM1P25270 412 aa3.48□□□□□ -1.85
CBF2YGR140W MAK11P20484 414 aaKnown RBP3.47□□□□□ -1.85
CBF2YGR140W BRL1P38770 471 aa3.47□□□□□ -1.85
CBF2YGR140W NOP7P53261 605 aaKnown RBP3.47□□□□□ -1.85
CBF2YGR140W DCD1P06773 312 aa3.46□□□□□ -1.85
CBF2YGR140W GEF1P37020 779 aa3.46□□□□□ -1.86
CBF2YGR140W RTG3P38165 486 aa3.46□□□□□ -1.86
CBF2YGR140W REF2P42073 533 aaPredicted RBP3.46□□□□□ -1.86
CBF2YGR140W SLX8P40072 274 aa3.45□□□□□ -1.86
CBF2YGR140W GUA1P38625 525 aaKnown RBP3.45□□□□□ -1.86
CBF2YGR140W RPL34BP40525 121 aaKnown RBP3.45□□□□□ -1.86
CBF2YGR140W HPC2Q01448 625 aa3.44□□□□□ -1.86
CBF2YGR140W RCR1P38212 213 aa3.44□□□□□ -1.86
CBF2YGR140W NAP1P25293 417 aaKnown RBP3.43□□□□□ -1.86
CBF2YGR140W SLD2P34252 453 aa3.43□□□□□ -1.86
CBF2YGR140W DIT2P21595 489 aa3.42□□□□□ -1.86
CBF2YGR140W COQ8P27697 501 aa3.42□□□□□ -1.86
CBF2YGR140W TFB3Q03290 321 aa3.42□□□□□ -1.86
CBF2YGR140W SSA2P10592 639 aaKnown RBP3.42□□□□□ -1.86
CBF2YGR140W MIF2P35201 549 aa3.41□□□□□ -1.86
CBF2YGR140W NOP8Q08287 484 aaPredicted RBP3.41□□□□□ -1.86
CBF2YGR140W SSA4P22202 642 aaKnown RBP3.41□□□□□ -1.86
CBF2YGR140W EPS1P40557 701 aa3.41□□□□□ -1.86
CBF2YGR140W BCH2P36122 765 aa3.41□□□□□ -1.86
CBF2YGR140W RPL34AP87262 121 aaPredicted RBP3.4□□□□□ -1.86
CBF2YGR140W NUP42P49686 430 aaKnown RBP3.4□□□□□ -1.87
CBF2YGR140W SUB2Q07478 446 aaKnown RBP3.4□□□□□ -1.87
CBF2YGR140W NOP53Q12080 455 aaKnown RBP3.4□□□□□ -1.87
CBF2YGR140W YJL007CP47080 104 aa3.39□□□□□ -1.87
CBF2YGR140W SNU71P53207 620 aaKnown RBP3.39□□□□□ -1.87
CBF2YGR140W YGL015CP33199 130 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms