RNA–Protein interactions for RNA: YBL026W

LSM2, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM2, Length 288 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM2YBL026W FAP1P53971 965 aa9.21□□□□□ -0.94
LSM2YBL026W MTC1P47018 478 aaKnown RBP8.77□□□□□ -1.01
LSM2YBL026W PRY3P47033 881 aa8.77□□□□□ -1.01
LSM2YBL026W DRS1P32892 752 aaKnown RBP8.73□□□□□ -1.01
LSM2YBL026W YCK3P39962 524 aa8.31□□□□□ -1.08
LSM2YBL026W HAA1Q12753 694 aaKnown RBP8.11□□□□□ -1.11
LSM2YBL026W AAD16Q02895 342 aa8.03□□□□□ -1.12
LSM2YBL026W PRI1P10363 409 aa7.94□□□□□ -1.14
LSM2YBL026W BFR2Q06631 534 aaKnown RBP7.55□□□□□ -1.2
LSM2YBL026W BUD31P25337 157 aaPredicted RBP7.51□□□□□ -1.21
LSM2YBL026W TSR3Q12094 313 aaKnown RBP7.45□□□□□ -1.22
LSM2YBL026W DIP2Q12220 943 aaPredicted RBP7.45□□□□□ -1.22
LSM2YBL026W RPG1P38249 964 aaKnown RBP7.36□□□□□ -1.23
LSM2YBL026W AVT3P36062 692 aa7.35□□□□□ -1.23
LSM2YBL026W ISW2Q08773 1120 aa7.35□□□□□ -1.23
LSM2YBL026W YGL015CP33199 130 aa7.17□□□□□ -1.26
LSM2YBL026W MRPL32P25348 183 aa7.12□□□□□ -1.27
LSM2YBL026W TFA1P36100 482 aa7.09□□□□□ -1.27
LSM2YBL026W RSE1Q04693 1361 aaKnown RBP7.07□□□□□ -1.28
LSM2YBL026W SIS1P25294 352 aaKnown RBP6.9□□□□□ -1.3
LSM2YBL026W RPL17AP05740 184 aaKnown RBP6.77□□□□□ -1.33
LSM2YBL026W RPL17BP46990 184 aaKnown RBP6.77□□□□□ -1.33
LSM2YBL026W REB1P21538 810 aa6.71□□□□□ -1.34
LSM2YBL026W CDC27P38042 758 aa6.6□□□□□ -1.35
LSM2YBL026W SPT21P35209 758 aa6.55□□□□□ -1.36
LSM2YBL026W MAP2P38174 421 aaKnown RBP6.52□□□□□ -1.37
LSM2YBL026W UBP10P53874 792 aaPredicted RBP6.5□□□□□ -1.37
LSM2YBL026W RIM101P33400 625 aa6.44□□□□□ -1.38
LSM2YBL026W UBP9P39967 754 aa6.4□□□□□ -1.38
LSM2YBL026W YKR023WP36119 530 aaKnown RBP6.31□□□□□ -1.4
LSM2YBL026W TGL3P40308 642 aa6.25□□□□□ -1.41
LSM2YBL026W TIF4632P39936 914 aaKnown RBP6.23□□□□□ -1.41
LSM2YBL026W OXP1P28273 1286 aa6.2□□□□□ -1.42
LSM2YBL026W TFC8Q12308 588 aa6.2□□□□□ -1.42
LSM2YBL026W DCD1P06773 312 aa6.19□□□□□ -1.42
LSM2YBL026W HOP09932 586 aa6.16□□□□□ -1.42
LSM2YBL026W SCY1P53009 804 aa6.16□□□□□ -1.42
LSM2YBL026W SSP1P38871 571 aa6.15□□□□□ -1.42
LSM2YBL026W YIL055CP40523 627 aaKnown RBP6.15□□□□□ -1.42
LSM2YBL026W PTP3P40048 928 aa6.14□□□□□ -1.43
LSM2YBL026W SLX5P32828 619 aaKnown RBP6.13□□□□□ -1.43
LSM2YBL026W YAH1Q12184 172 aaKnown RBP6.09□□□□□ -1.43
LSM2YBL026W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
LSM2YBL026W RQC2Q12532 1038 aaKnown RBP6.06□□□□□ -1.44
LSM2YBL026W RSM7P47150 247 aa6.05□□□□□ -1.44
LSM2YBL026W YLR271WQ06152 274 aa6.04□□□□□ -1.44
LSM2YBL026W BCH2P36122 765 aa6□□□□□ -1.45
LSM2YBL026W YBL029C-AQ3E756 94 aa5.97□□□□□ -1.45
LSM2YBL026W BBC1P47068 1157 aa5.96□□□□□ -1.46
LSM2YBL026W MGA2P40578 1113 aa5.95□□□□□ -1.46
LSM2YBL026W AI2P03876 854 aa5.94□□□□□ -1.46
LSM2YBL026W RGA2Q06407 1009 aa5.94□□□□□ -1.46
LSM2YBL026W PSD2P53037 1138 aaKnown RBP5.92□□□□□ -1.46
LSM2YBL026W EPS1P40557 701 aa5.91□□□□□ -1.46
LSM2YBL026W MST1P07236 462 aa5.87□□□□□ -1.47
LSM2YBL026W BDF1P35817 686 aa5.86□□□□□ -1.47
LSM2YBL026W VNX1P42839 908 aa5.85□□□□□ -1.47
LSM2YBL026W CST9Q06032 482 aa5.84□□□□□ -1.47
LSM2YBL026W AIR2Q12476 344 aaKnown RBP5.81□□□□□ -1.48
LSM2YBL026W YJL171CP46992 396 aa5.79□□□□□ -1.48
LSM2YBL026W SPP1Q03012 353 aa5.77□□□□□ -1.49
LSM2YBL026W DMA1P38823 416 aa5.76□□□□□ -1.49
LSM2YBL026W YOR238WQ08634 303 aa5.76□□□□□ -1.49
LSM2YBL026W MRM1P25270 412 aa5.75□□□□□ -1.49
LSM2YBL026W FKH1P40466 484 aa5.72□□□□□ -1.49
LSM2YBL026W RTG3P38165 486 aa5.71□□□□□ -1.5
LSM2YBL026W NSR1P27476 414 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5 RIP-Chip
LSM2YBL026W WSC3Q12215 556 aa5.69□□□□□ -1.5
LSM2YBL026W RAM2P29703 316 aa5.64□□□□□ -1.51
LSM2YBL026W RCR1P38212 213 aa5.63□□□□□ -1.51
LSM2YBL026W TIF11P38912 153 aaKnown RBP5.63□□□□□ -1.51
LSM2YBL026W VPS29P38759 282 aa5.62□□□□□ -1.51
LSM2YBL026W YAP5P40574 245 aa5.62□□□□□ -1.51
LSM2YBL026W YMR1P47147 688 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
LSM2YBL026W MAK11P20484 414 aaKnown RBP5.61□□□□□ -1.51
LSM2YBL026W BMT6Q12291 365 aa5.6□□□□□ -1.51
LSM2YBL026W LDB19Q12502 818 aa5.57□□□□□ -1.52
LSM2YBL026W SAS10Q12136 610 aaPredicted RBP5.55□□□□□ -1.52
LSM2YBL026W DBP1P24784 617 aaKnown RBP5.54□□□□□ -1.52
LSM2YBL026W STS1P38637 319 aa5.54□□□□□ -1.52
LSM2YBL026W IFH1P39520 1085 aa5.54□□□□□ -1.52
LSM2YBL026W NOP53Q12080 455 aaKnown RBP5.54□□□□□ -1.52
LSM2YBL026W SET1P38827 1080 aaKnown RBP5.52□□□□□ -1.53
LSM2YBL026W IOC2Q12072 812 aa5.51□□□□□ -1.53
LSM2YBL026W COQ8P27697 501 aa5.5□□□□□ -1.53
LSM2YBL026W YFR006WP43590 535 aa5.49□□□□□ -1.53
LSM2YBL026W ULI1P43604 169 aa5.49□□□□□ -1.53
LSM2YBL026W YPR148CQ06523 435 aa5.49□□□□□ -1.53
LSM2YBL026W VMA1P17255 1071 aaKnown RBP5.47□□□□□ -1.53
LSM2YBL026W MIF2P35201 549 aa5.47□□□□□ -1.53
LSM2YBL026W GTT3P39996 337 aa5.47□□□□□ -1.53
LSM2YBL026W PIB1Q06651 286 aa5.46□□□□□ -1.54
LSM2YBL026W EDS1P38073 919 aa5.44□□□□□ -1.54
LSM2YBL026W SAM3Q08986 587 aa5.44□□□□□ -1.54
LSM2YBL026W ABP1P15891 592 aaKnown RBP5.43□□□□□ -1.54
LSM2YBL026W CKB1P43639 278 aa5.43□□□□□ -1.54
LSM2YBL026W PTC3P34221 468 aaKnown RBP5.42□□□□□ -1.54
LSM2YBL026W RGA1P39083 1007 aa5.4□□□□□ -1.54
LSM2YBL026W MSB4Q12317 492 aa5.4□□□□□ -1.54
LSM2YBL026W VPS70P47161 811 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms