Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PMS1P54277 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.66■■□□□ 1.22
PMS1P54277 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PMS1P54277 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PMS1P54277 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PMS1P54277 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PMS1P54277 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.66■■□□□ 1.22
PMS1P54277 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PMS1P54277 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PMS1P54277 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PMS1P54277 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PMS1P54277 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PMS1P54277 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.66■■□□□ 1.22
PMS1P54277 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PMS1P54277 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PMS1P54277 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 AC112907.3-201ENST00000577781 2400 ntBASIC22.65■■□□□ 1.22
PMS1P54277 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
PMS1P54277 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.65■■□□□ 1.22
PMS1P54277 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.65■■□□□ 1.22
PMS1P54277 KRT18P20-201ENST00000548986 1279 ntBASIC22.65■■□□□ 1.22
PMS1P54277 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.65■■□□□ 1.22
PMS1P54277 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PMS1P54277 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PMS1P54277 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PMS1P54277 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
PMS1P54277 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.64■■□□□ 1.22
PMS1P54277 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PMS1P54277 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PMS1P54277 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.64■■□□□ 1.21
PMS1P54277 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.64■■□□□ 1.21
PMS1P54277 AC091799.1-201ENST00000422823 811 ntBASIC22.64■■□□□ 1.21
PMS1P54277 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.64■■□□□ 1.21
PMS1P54277 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.64■■□□□ 1.21
PMS1P54277 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PMS1P54277 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PMS1P54277 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PMS1P54277 RBM17P2-201ENST00000616397 1405 ntBASIC22.64■■□□□ 1.21
PMS1P54277 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.64■■□□□ 1.21
PMS1P54277 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
PMS1P54277 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.64■■□□□ 1.21
PMS1P54277 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
PMS1P54277 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.64■■□□□ 1.21
PMS1P54277 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PMS1P54277 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.63■■□□□ 1.21
PMS1P54277 AC019069.1-201ENST00000610008 1333 ntBASIC22.63■■□□□ 1.21
PMS1P54277 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PMS1P54277 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PMS1P54277 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PMS1P54277 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PMS1P54277 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PMS1P54277 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.63■■□□□ 1.21
PMS1P54277 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.63■■□□□ 1.21
PMS1P54277 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PMS1P54277 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PMS1P54277 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PMS1P54277 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.63■■□□□ 1.21
PMS1P54277 AC116050.2-201ENST00000612102 1779 ntBASIC22.63■■□□□ 1.21
PMS1P54277 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PMS1P54277 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PMS1P54277 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PMS1P54277 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PMS1P54277 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PMS1P54277 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PMS1P54277 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PMS1P54277 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PMS1P54277 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.62■■□□□ 1.21
PMS1P54277 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PMS1P54277 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.62■■□□□ 1.21
PMS1P54277 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PMS1P54277 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.62■■□□□ 1.21
PMS1P54277 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PMS1P54277 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PMS1P54277 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.62■■□□□ 1.21
PMS1P54277 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.61■■□□□ 1.21
PMS1P54277 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.61■■□□□ 1.21
PMS1P54277 UBE2DNL-204ENST00000602536 740 ntBASIC22.61■■□□□ 1.21
PMS1P54277 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PMS1P54277 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PMS1P54277 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms