Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC061975.6-201ENST00000579045 1553 ntBASIC17.32■□□□□ 0.36
TRBV23-1A0A0A0MS06 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 UBE2DNL-204ENST00000602536 740 ntBASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV23-1A0A0A0MS06 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 Z98882.1-201ENST00000622160 2253 ntBASIC17.3■□□□□ 0.36
TRBV23-1A0A0A0MS06 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 AL137784.2-201ENST00000607332 1000 ntBASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV23-1A0A0A0MS06 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC245052.3-201ENST00000450182 901 ntBASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms