Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PABPC1P11940 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PABPC1P11940 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PABPC1P11940 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PABPC1P11940 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PABPC1P11940 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.22■□□□□ 0.99
PABPC1P11940 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PABPC1P11940 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PABPC1P11940 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PABPC1P11940 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PABPC1P11940 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PABPC1P11940 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.22■□□□□ 0.99
PABPC1P11940 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.21■□□□□ 0.99
PABPC1P11940 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PABPC1P11940 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PABPC1P11940 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PABPC1P11940 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PABPC1P11940 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.21■□□□□ 0.99
PABPC1P11940 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PABPC1P11940 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PABPC1P11940 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PABPC1P11940 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.21■□□□□ 0.99
PABPC1P11940 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.21■□□□□ 0.99
PABPC1P11940 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.21■□□□□ 0.99
PABPC1P11940 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PABPC1P11940 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PABPC1P11940 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PABPC1P11940 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PABPC1P11940 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PABPC1P11940 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PABPC1P11940 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
PABPC1P11940 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.2■□□□□ 0.98
PABPC1P11940 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PABPC1P11940 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PABPC1P11940 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PABPC1P11940 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.2■□□□□ 0.98
PABPC1P11940 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.2■□□□□ 0.98
PABPC1P11940 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PABPC1P11940 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.2■□□□□ 0.98
PABPC1P11940 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PABPC1P11940 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PABPC1P11940 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PABPC1P11940 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PABPC1P11940 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.2■□□□□ 0.98
PABPC1P11940 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.2■□□□□ 0.98
PABPC1P11940 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
PABPC1P11940 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PABPC1P11940 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PABPC1P11940 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PABPC1P11940 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PABPC1P11940 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PABPC1P11940 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PABPC1P11940 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PABPC1P11940 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PABPC1P11940 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PABPC1P11940 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.19■□□□□ 0.98
PABPC1P11940 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PABPC1P11940 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.19■□□□□ 0.98
PABPC1P11940 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.19■□□□□ 0.98
PABPC1P11940 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.19■□□□□ 0.98
PABPC1P11940 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PABPC1P11940 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PABPC1P11940 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.18■□□□□ 0.98
PABPC1P11940 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PABPC1P11940 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PABPC1P11940 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PABPC1P11940 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PABPC1P11940 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.18■□□□□ 0.98
PABPC1P11940 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PABPC1P11940 AC007322.3-201ENST00000426526 701 ntBASIC21.18■□□□□ 0.98
PABPC1P11940 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.18■□□□□ 0.98
PABPC1P11940 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.18■□□□□ 0.98
PABPC1P11940 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PABPC1P11940 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PABPC1P11940 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PABPC1P11940 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.18■□□□□ 0.98
PABPC1P11940 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PABPC1P11940 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PABPC1P11940 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PABPC1P11940 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PABPC1P11940 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.17■□□□□ 0.98
PABPC1P11940 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.17■□□□□ 0.98
PABPC1P11940 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.17■□□□□ 0.98
PABPC1P11940 AC100791.3-201ENST00000617619 330 ntBASIC21.17■□□□□ 0.98
PABPC1P11940 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.17■□□□□ 0.98
PABPC1P11940 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PABPC1P11940 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
PABPC1P11940 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PABPC1P11940 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PABPC1P11940 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PABPC1P11940 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
PABPC1P11940 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PABPC1P11940 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PABPC1P11940 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PABPC1P11940 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PABPC1P11940 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.16■□□□□ 0.98
PABPC1P11940 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.16■□□□□ 0.98
PABPC1P11940 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.16■□□□□ 0.98
PABPC1P11940 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PABPC1P11940 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms