Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YHR214C-CYHR214C-C 1437 nt3.72□□□□□ -1.81
SSL2Q00578 URA2YJL130C 6645 nt3.72□□□□□ -1.81
SSL2Q00578 PPN1YDR452W 2025 nt3.72□□□□□ -1.81
SSL2Q00578 snR59snR59 78 nt3.72□□□□□ -1.81
SSL2Q00578 RPS29BYDL061C 171 nt3.72□□□□□ -1.81
SSL2Q00578 BCD1YHR040W 1101 nt3.72□□□□□ -1.81
SSL2Q00578 RPL40BYKR094C 387 nt3.72□□□□□ -1.81
SSL2Q00578 AFB1YLR040C 675 nt3.72□□□□□ -1.81
SSL2Q00578 VPS63YLR261C 327 nt3.72□□□□□ -1.81
SSL2Q00578 YOR331CYOR331C 558 nt3.72□□□□□ -1.81
SSL2Q00578 AIM4YBR194W 372 nt3.72□□□□□ -1.81
SSL2Q00578 snR54snR54 86 nt3.72□□□□□ -1.81
SSL2Q00578 ARG5,6YER069W 2592 nt3.72□□□□□ -1.81
SSL2Q00578 YGL039WYGL039W 1047 nt3.71□□□□□ -1.82
SSL2Q00578 YHR214C-EYHR214C-E 300 nt3.71□□□□□ -1.82
SSL2Q00578 YKE2YLR200W 345 nt3.71□□□□□ -1.82
SSL2Q00578 YLR224WYLR224W 1110 nt3.71□□□□□ -1.82
SSL2Q00578 YAR070CYAR070C 300 nt3.71□□□□□ -1.82
SSL2Q00578 MPD2YOL088C 834 nt3.71□□□□□ -1.82
SSL2Q00578 VID24YBR105C 1089 nt3.71□□□□□ -1.82
SSL2Q00578 NSP1YJL041W 2472 nt3.71□□□□□ -1.82
SSL2Q00578 PIN4YBL051C 2007 nt3.71□□□□□ -1.82
SSL2Q00578 BAR1YIL015W 1764 nt3.71□□□□□ -1.82
SSL2Q00578 SPA2YLL021W 4401 nt3.71□□□□□ -1.82
SSL2Q00578 YGR027W-BYGR027W-B 5268 nt3.7□□□□□ -1.82
SSL2Q00578 YLR227W-BYLR227W-B 5268 nt3.7□□□□□ -1.82
SSL2Q00578 YPR158C-DYPR158C-D 5268 nt3.7□□□□□ -1.82
SSL2Q00578 AHC2YCR082W 387 nt3.7□□□□□ -1.82
SSL2Q00578 HNT1YDL125C 477 nt3.7□□□□□ -1.82
SSL2Q00578 YDR320W-BYDR320W-B 138 nt3.7□□□□□ -1.82
SSL2Q00578 SPC1YJR010C-A 285 nt3.7□□□□□ -1.82
SSL2Q00578 YML108WYML108W 318 nt3.7□□□□□ -1.82
SSL2Q00578 CDC40YDR364C 1368 nt3.7□□□□□ -1.82
SSL2Q00578 TGL3YMR313C 1929 nt3.7□□□□□ -1.82
SSL2Q00578 RPO21YDL140C 5202 nt3.69□□□□□ -1.82
SSL2Q00578 PSF1YDR013W 627 nt3.69□□□□□ -1.82
SSL2Q00578 YDR262WYDR262W 819 nt3.69□□□□□ -1.82
SSL2Q00578 CPR5YDR304C 678 nt3.69□□□□□ -1.82
SSL2Q00578 GPI19YDR437W 423 nt3.69□□□□□ -1.82
SSL2Q00578 COX18YGR062C 951 nt3.69□□□□□ -1.82
SSL2Q00578 TWF1YGR080W 999 nt3.69□□□□□ -1.82
SSL2Q00578 RTS3YGR161C 792 nt3.69□□□□□ -1.82
SSL2Q00578 HIT1YJR055W 495 nt3.69□□□□□ -1.82
SSL2Q00578 ECM4YKR076W 1113 nt3.69□□□□□ -1.82
SSL2Q00578 MRPL20YKR085C 588 nt3.69□□□□□ -1.82
SSL2Q00578 AFT2YPL202C 1251 nt3.69□□□□□ -1.82
SSL2Q00578 MSR1YHR091C 1932 nt3.69□□□□□ -1.82
SSL2Q00578 REB1YBR049C 2433 nt3.69□□□□□ -1.82
SSL2Q00578 RPN6YDL097C 1305 nt3.69□□□□□ -1.82
SSL2Q00578 TOP1YOL006C 2310 nt3.69□□□□□ -1.82
SSL2Q00578 RPL27BYDR471W 411 nt3.68□□□□□ -1.82
SSL2Q00578 PDX1YGR193C 1233 nt3.68□□□□□ -1.82
SSL2Q00578 EMC2YJR088C 879 nt3.68□□□□□ -1.82
SSL2Q00578 TDA8YAL064C-A 381 nt3.68□□□□□ -1.82
SSL2Q00578 YAR053WYAR053W 297 nt3.68□□□□□ -1.82
SSL2Q00578 RPL13BYMR142C 600 nt3.68□□□□□ -1.82
SSL2Q00578 YPR096CYPR096C 303 nt3.68□□□□□ -1.82
SSL2Q00578 YLR177WYLR177W 1887 nt3.68□□□□□ -1.82
SSL2Q00578 YMR018WYMR018W 1545 nt3.68□□□□□ -1.82
SSL2Q00578 HRD1YOL013C 1656 nt3.68□□□□□ -1.82
SSL2Q00578 YNL284C-AYNL284C-A 1323 nt3.68□□□□□ -1.82
SSL2Q00578 ATG26YLR189C 3597 nt3.67□□□□□ -1.82
SSL2Q00578 CIN8YEL061C 3003 nt3.67□□□□□ -1.82
SSL2Q00578 ETP1YHL010C 1758 nt3.67□□□□□ -1.82
SSL2Q00578 CDC50YCR094W 1176 nt3.67□□□□□ -1.82
SSL2Q00578 OTU1YFL044C 906 nt3.67□□□□□ -1.82
SSL2Q00578 RPS0AYGR214W 759 nt3.67□□□□□ -1.82
SSL2Q00578 PXR1YGR280C 816 nt3.67□□□□□ -1.82
SSL2Q00578 CRG1YHR209W 876 nt3.67□□□□□ -1.82
SSL2Q00578 YJR111CYJR111C 852 nt3.67□□□□□ -1.82
SSL2Q00578 YOR392WYOR392W 444 nt3.67□□□□□ -1.82
SSL2Q00578 YPR016W-AYPR016W-A 261 nt3.67□□□□□ -1.82
SSL2Q00578 CCM1YGR150C 2595 nt3.67□□□□□ -1.82
SSL2Q00578 SWC4YGR002C 1431 nt3.67□□□□□ -1.82
SSL2Q00578 VPS53YJL029C 2469 nt3.67□□□□□ -1.82
SSL2Q00578 ATP25YMR098C 1839 nt3.67□□□□□ -1.82
SSL2Q00578 SHE4YOR035C 2370 nt3.67□□□□□ -1.82
SSL2Q00578 AUS1YOR011W 4185 nt3.66□□□□□ -1.82
SSL2Q00578 YEL032C-AYEL032C-A 162 nt3.66□□□□□ -1.82
SSL2Q00578 YGR017WYGR017W 894 nt3.66□□□□□ -1.82
SSL2Q00578 ERV1YGR029W 570 nt3.66□□□□□ -1.82
SSL2Q00578 PCL5YHR071W 690 nt3.66□□□□□ -1.82
SSL2Q00578 PDP3YLR455W 915 nt3.66□□□□□ -1.82
SSL2Q00578 YMR158W-BYMR158W-B 321 nt3.66□□□□□ -1.82
SSL2Q00578 RIO2YNL207W 1278 nt3.66□□□□□ -1.82
SSL2Q00578 VAM10YOR068C 345 nt3.66□□□□□ -1.82
SSL2Q00578 PAM1YDR251W 2493 nt3.65□□□□□ -1.82
SSL2Q00578 REC8YPR007C 2043 nt3.65□□□□□ -1.82
SSL2Q00578 YDL240C-AYDL240C-A 138 nt3.65□□□□□ -1.83
SSL2Q00578 YDR366CYDR366C 399 nt3.65□□□□□ -1.83
SSL2Q00578 FRQ1YDR373W 573 nt3.65□□□□□ -1.83
SSL2Q00578 YGR121W-AYGR121W-A 216 nt3.65□□□□□ -1.83
SSL2Q00578 BIG1YHR101C 1008 nt3.65□□□□□ -1.83
SSL2Q00578 SGN1YIR001C 753 nt3.65□□□□□ -1.83
SSL2Q00578 YKL066WYKL066W 444 nt3.65□□□□□ -1.83
SSL2Q00578 PEX11YOL147C 711 nt3.65□□□□□ -1.83
SSL2Q00578 YPL225WYPL225W 441 nt3.65□□□□□ -1.83
SSL2Q00578 ARG2YJL071W 1725 nt3.64□□□□□ -1.83
SSL2Q00578 YDR537CYDR537C 606 nt3.64□□□□□ -1.83
SSL2Q00578 YJL222W-BYJL222W-B 138 nt3.64□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 41.5 ms