RNA–Protein interactions for RNA: YJL130C

URA2, Transcript of Bifunctional carbamoylphosphate synthetase/aspartate transcarbamylase, yeast

Gene URA2, Length 6,645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA2	YJL130C	INO80	P53115	1489 aa		5.29	□□□□□ -1.56
URA2	YJL130C	SPA2	P23201	1466 aa	Known RBP	5.23	□□□□□ -1.57
URA2	YJL130C	DRS1	P32892	752 aa	Known RBP	5.2	□□□□□ -1.58
URA2	YJL130C	SGS1	P35187	1447 aa		5.19	□□□□□ -1.58
URA2	YJL130C	SKI3	P17883	1432 aa	Known RBP	5.13	□□□□□ -1.59
URA2	YJL130C	SCT1	P32784	759 aa		5.05	□□□□□ -1.6
URA2	YJL130C	TAF7	Q05021	590 aa		5.05	□□□□□ -1.6
URA2	YJL130C	TCB3	Q03640	1545 aa	Known RBP	5.04	□□□□□ -1.6
URA2	YJL130C	SSN2	P38931	1420 aa		4.97	□□□□□ -1.61
URA2	YJL130C	RQC2	Q12532	1038 aa	Known RBP	4.94	□□□□□ -1.62
URA2	YJL130C	CHD1	P32657	1468 aa		4.93	□□□□□ -1.62
URA2	YJL130C	SAS10	Q12136	610 aa	Predicted RBP	4.93	□□□□□ -1.62
URA2	YJL130C	BFR2	Q06631	534 aa	Known RBP	4.92	□□□□□ -1.62
URA2	YJL130C	SPT6	P23615	1451 aa	Known RBP	4.9	□□□□□ -1.62
URA2	YJL130C	MTC1	P47018	478 aa	Known RBP	4.88	□□□□□ -1.63
URA2	YJL130C	TAF2	P23255	1407 aa		4.82	□□□□□ -1.64
URA2	YJL130C	YTA7	P40340	1379 aa		4.82	□□□□□ -1.64
URA2	YJL130C	SMC4	Q12267	1418 aa		4.79	□□□□□ -1.64
URA2	YJL130C	IFH1	P39520	1085 aa		4.76	□□□□□ -1.65
URA2	YJL130C	BUD4	P47136	1447 aa		4.76	□□□□□ -1.65
URA2	YJL130C	XRN1	P22147	1528 aa	Known RBP	4.71	□□□□□ -1.65
URA2	YJL130C	PAF1	P38351	445 aa		4.7	□□□□□ -1.66
URA2	YJL130C	STH1	P32597	1359 aa		4.7	□□□□□ -1.66
URA2	YJL130C	SEC3	P33332	1336 aa	Known RBP	4.68	□□□□□ -1.66
URA2	YJL130C	NUP170	P38181	1502 aa		4.68	□□□□□ -1.66
URA2	YJL130C	NAP1	P25293	417 aa	Known RBP	4.66	□□□□□ -1.66
URA2	YJL130C	RSE1	Q04693	1361 aa	Known RBP	4.65	□□□□□ -1.66
URA2	YJL130C	MMS22	Q06164	1454 aa		4.65	□□□□□ -1.67
URA2	YJL130C	STU1	P38198	1513 aa		4.65	□□□□□ -1.67
URA2	YJL130C	POL5	P39985	1022 aa	Known RBP	4.65	□□□□□ -1.67
URA2	YJL130C	NOP7	P53261	605 aa	Known RBP	4.64	□□□□□ -1.67
URA2	YJL130C	RTT106	P40161	455 aa		4.64	□□□□□ -1.67
URA2	YJL130C	MYO2	P19524	1574 aa	Known RBP	4.64	□□□□□ -1.67
URA2	YJL130C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
URA2	YJL130C	SIN3	P22579	1536 aa		4.63	□□□□□ -1.67
URA2	YJL130C	UFD4	P33202	1483 aa		4.62	□□□□□ -1.67
URA2	YJL130C	ORC1	P54784	914 aa	Predicted RBP	4.62	□□□□□ -1.67
URA2	YJL130C	SWR1	Q05471	1514 aa		4.62	□□□□□ -1.67
URA2	YJL130C	HSL1	P34244	1518 aa		4.62	□□□□□ -1.67
URA2	YJL130C	SPP41	P38904	1435 aa		4.61	□□□□□ -1.67
URA2	YJL130C	LEU3	P08638	886 aa		4.61	□□□□□ -1.67
URA2	YJL130C	MYO4	P32492	1471 aa		4.6	□□□□□ -1.67
URA2	YJL130C	NOP2	P40991	618 aa	Known RBP	4.6	□□□□□ -1.67
URA2	YJL130C	THO2	P53552	1597 aa	Known RBP	4.59	□□□□□ -1.67
URA2	YJL130C	IKI3	Q06706	1349 aa	Known RBP	4.59	□□□□□ -1.67
URA2	YJL130C	ENP1	P38333	483 aa	Known RBP	4.59	□□□□□ -1.67
URA2	YJL130C	ECM5	Q03214	1411 aa		4.58	□□□□□ -1.68
URA2	YJL130C	URN1	Q06525	465 aa	Known RBP	4.58	□□□□□ -1.68
URA2	YJL130C	TFA1	P36100	482 aa		4.57	□□□□□ -1.68
URA2	YJL130C	REV3	P14284	1504 aa		4.57	□□□□□ -1.68
URA2	YJL130C	MNN4	P36044	1178 aa		4.57	□□□□□ -1.68
URA2	YJL130C	PAN1	P32521	1480 aa		4.57	□□□□□ -1.68
URA2	YJL130C	PEP1	P32319	1579 aa		4.56	□□□□□ -1.68
URA2	YJL130C	KOG1	P38873	1557 aa		4.55	□□□□□ -1.68
URA2	YJL130C	CKB1	P43639	278 aa		4.55	□□□□□ -1.68
URA2	YJL130C	TOP2	P06786	1428 aa	Known RBP	4.54	□□□□□ -1.68
URA2	YJL130C	FPR3	P38911	411 aa	Known RBP	4.54	□□□□□ -1.68
URA2	YJL130C	POL1	P13382	1468 aa		4.53	□□□□□ -1.68
URA2	YJL130C	YPK9	Q12697	1472 aa		4.52	□□□□□ -1.69
URA2	YJL130C	HIR3	P47171	1648 aa		4.5	□□□□□ -1.69
URA2	YJL130C	YFR016C	P43597	1233 aa	Known RBP	4.5	□□□□□ -1.69
URA2	YJL130C	MMS1	Q06211	1407 aa		4.5	□□□□□ -1.69
URA2	YJL130C	TY1B-DR4	Q07793	1604 aa		4.5	□□□□□ -1.69
URA2	YJL130C	MON2	P48563	1636 aa	Predicted RBP	4.49	□□□□□ -1.69
URA2	YJL130C	CAT8	P39113	1433 aa		4.47	□□□□□ -1.69
URA2	YJL130C	BUD21	Q08492	214 aa	Predicted RBP	4.47	□□□□□ -1.69
URA2	YJL130C	YOR1	P53049	1477 aa		4.47	□□□□□ -1.69
URA2	YJL130C	DNA2	P38859	1522 aa		4.46	□□□□□ -1.7
URA2	YJL130C	YLR419W	Q06698	1435 aa	Known RBP	4.46	□□□□□ -1.7
URA2	YJL130C	TRM732	Q03496	1420 aa		4.45	□□□□□ -1.7
URA2	YJL130C	SSK2	P53599	1579 aa		4.44	□□□□□ -1.7
URA2	YJL130C	EAF7	P53911	425 aa	Known RBP	4.43	□□□□□ -1.7
URA2	YJL130C	YRB30	P53107	440 aa	Predicted RBP	4.43	□□□□□ -1.7
URA2	YJL130C	EBP2	P36049	427 aa	Known RBP	4.43	□□□□□ -1.7
URA2	YJL130C	SRB8	P25648	1427 aa		4.42	□□□□□ -1.7
URA2	YJL130C	RPP0	P05317	312 aa	Known RBP	4.41	□□□□□ -1.7
URA2	YJL130C	MET10	P39692	1035 aa		4.4	□□□□□ -1.7
URA2	YJL130C	PDR5	P33302	1511 aa	Known RBP	4.4	□□□□□ -1.7
URA2	YJL130C	ESL2	P36168	1195 aa		4.4	□□□□□ -1.71
URA2	YJL130C	MHP1	P43638	1398 aa		4.4	□□□□□ -1.71
URA2	YJL130C	RPO31	P04051	1460 aa		4.4	□□□□□ -1.71
URA2	YJL130C	ECM16	Q04217	1267 aa	Known RBP	4.39	□□□□□ -1.71
URA2	YJL130C	TCB2	P48231	1178 aa		4.39	□□□□□ -1.71
URA2	YJL130C	MDS3	P53094	1487 aa		4.39	□□□□□ -1.71
URA2	YJL130C	GEA1	P47102	1408 aa	Predicted RBP	4.38	□□□□□ -1.71
URA2	YJL130C	YPR148C	Q06523	435 aa		4.38	□□□□□ -1.71
URA2	YJL130C	QCR6	P00127	147 aa		4.38	□□□□□ -1.71
URA2	YJL130C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
URA2	YJL130C	CAB3	P36076	571 aa		4.37	□□□□□ -1.71
URA2	YJL130C	CFT1	Q06632	1357 aa	Known RBP	4.37	□□□□□ -1.71
URA2	YJL130C	RKR1	Q04781	1562 aa		4.37	□□□□□ -1.71
URA2	YJL130C	SNQ2	P32568	1501 aa	Known RBP	4.37	□□□□□ -1.71
URA2	YJL130C	GEA2	P39993	1459 aa	Known RBP	4.37	□□□□□ -1.71
URA2	YJL130C	SCC2	Q04002	1493 aa		4.36	□□□□□ -1.71
URA2	YJL130C	TSC11	P40061	1430 aa		4.36	□□□□□ -1.71
URA2	YJL130C	IRC20	Q06554	1556 aa		4.36	□□□□□ -1.71
URA2	YJL130C	IOC4	Q04213	475 aa		4.35	□□□□□ -1.71
URA2	YJL130C	FUN12	P39730	1002 aa	Known RBP	4.34	□□□□□ -1.71
URA2	YJL130C	RLF2	Q12495	606 aa		4.34	□□□□□ -1.71
URA2	YJL130C	CDC45	Q08032	650 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms