RNA–Protein interactions for RNA: YPR158C-D

YPR158C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YPR158C-D, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR158C-D	YPR158C-D	MTC1	P47018	478 aa	Known RBP	7.16	□□□□□ -1.26
YPR158C-D	YPR158C-D	RSE1	Q04693	1361 aa	Known RBP	6.72	□□□□□ -1.33
YPR158C-D	YPR158C-D	INO80	P53115	1489 aa		6.52	□□□□□ -1.37
YPR158C-D	YPR158C-D	MIF2	P35201	549 aa		6.45	□□□□□ -1.38
YPR158C-D	YPR158C-D	ABP1	P15891	592 aa	Known RBP	6.12	□□□□□ -1.43
YPR158C-D	YPR158C-D	RQC2	Q12532	1038 aa	Known RBP	5.99	□□□□□ -1.45
YPR158C-D	YPR158C-D	YFR006W	P43590	535 aa		5.95	□□□□□ -1.46
YPR158C-D	YPR158C-D	KOG1	P38873	1557 aa		5.87	□□□□□ -1.47
YPR158C-D	YPR158C-D	YTA7	P40340	1379 aa		5.78	□□□□□ -1.48
YPR158C-D	YPR158C-D	SPA2	P23201	1466 aa	Known RBP	5.78	□□□□□ -1.48
YPR158C-D	YPR158C-D	SWR1	Q05471	1514 aa		5.68	□□□□□ -1.5
YPR158C-D	YPR158C-D	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
YPR158C-D	YPR158C-D	DNA2	P38859	1522 aa		5.66	□□□□□ -1.5
YPR158C-D	YPR158C-D	PRI1	P10363	409 aa		5.65	□□□□□ -1.51
YPR158C-D	YPR158C-D	MON2	P48563	1636 aa	Predicted RBP	5.64	□□□□□ -1.51
YPR158C-D	YPR158C-D	URN1	Q06525	465 aa	Known RBP	5.59	□□□□□ -1.51
YPR158C-D	YPR158C-D	UBP1	P25037	809 aa		5.55	□□□□□ -1.52
YPR158C-D	YPR158C-D	LEU3	P08638	886 aa		5.53	□□□□□ -1.52
YPR158C-D	YPR158C-D	TAF2	P23255	1407 aa		5.51	□□□□□ -1.53
YPR158C-D	YPR158C-D	TCB3	Q03640	1545 aa	Known RBP	5.49	□□□□□ -1.53
YPR158C-D	YPR158C-D	RTT106	P40161	455 aa		5.49	□□□□□ -1.53
YPR158C-D	YPR158C-D	SGS1	P35187	1447 aa		5.47	□□□□□ -1.53
YPR158C-D	YPR158C-D	DRS2	P39524	1355 aa		5.47	□□□□□ -1.53
YPR158C-D	YPR158C-D	YJL181W	P46987	611 aa		5.44	□□□□□ -1.54
YPR158C-D	YPR158C-D	MMS1	Q06211	1407 aa		5.43	□□□□□ -1.54
YPR158C-D	YPR158C-D	RRD1	P40454	393 aa	Known RBP	5.41	□□□□□ -1.54
YPR158C-D	YPR158C-D	LTE1	P07866	1435 aa		5.4	□□□□□ -1.54
YPR158C-D	YPR158C-D	GEA2	P39993	1459 aa	Known RBP	5.4	□□□□□ -1.55
YPR158C-D	YPR158C-D	NAP1	P25293	417 aa	Known RBP	5.39	□□□□□ -1.55
YPR158C-D	YPR158C-D	SAS10	Q12136	610 aa	Predicted RBP	5.34	□□□□□ -1.55
YPR158C-D	YPR158C-D	SCT1	P32784	759 aa		5.34	□□□□□ -1.55
YPR158C-D	YPR158C-D	BNR1	P40450	1375 aa		5.34	□□□□□ -1.55
YPR158C-D	YPR158C-D	BUD4	P47136	1447 aa		5.33	□□□□□ -1.56
YPR158C-D	YPR158C-D	ECM5	Q03214	1411 aa		5.31	□□□□□ -1.56
YPR158C-D	YPR158C-D	YMR196W	Q04336	1088 aa		5.3	□□□□□ -1.56
YPR158C-D	YPR158C-D	SKI3	P17883	1432 aa	Known RBP	5.29	□□□□□ -1.56
YPR158C-D	YPR158C-D	RRT14	P40470	206 aa		5.28	□□□□□ -1.56
YPR158C-D	YPR158C-D	UGA2	P38067	497 aa		5.27	□□□□□ -1.57
YPR158C-D	YPR158C-D	ENP1	P38333	483 aa	Known RBP	5.26	□□□□□ -1.57
YPR158C-D	YPR158C-D	ENV9	Q08651	330 aa		5.23	□□□□□ -1.57
YPR158C-D	YPR158C-D	MRX12	P47084	519 aa		5.21	□□□□□ -1.58
YPR158C-D	YPR158C-D	TAF7	Q05021	590 aa		5.21	□□□□□ -1.58
YPR158C-D	YPR158C-D	PRP40	P33203	583 aa	Known RBP	5.21	□□□□□ -1.58
YPR158C-D	YPR158C-D	BFR2	Q06631	534 aa	Known RBP	5.2	□□□□□ -1.58
YPR158C-D	YPR158C-D	TRM732	Q03496	1420 aa		5.19	□□□□□ -1.58
YPR158C-D	YPR158C-D	BPT1	P14772	1559 aa		5.19	□□□□□ -1.58
YPR158C-D	YPR158C-D	HSL1	P34244	1518 aa		5.18	□□□□□ -1.58
YPR158C-D	YPR158C-D	YKR023W	P36119	530 aa	Known RBP	5.16	□□□□□ -1.58
YPR158C-D	YPR158C-D	REV3	P14284	1504 aa		5.16	□□□□□ -1.58
YPR158C-D	YPR158C-D	SPT6	P23615	1451 aa	Known RBP	5.14	□□□□□ -1.59
YPR158C-D	YPR158C-D	DRS1	P32892	752 aa	Known RBP	5.14	□□□□□ -1.59
YPR158C-D	YPR158C-D	ALD2	P47771	506 aa		5.13	□□□□□ -1.59
YPR158C-D	YPR158C-D	ITT1	Q04638	464 aa		5.13	□□□□□ -1.59
YPR158C-D	YPR158C-D	SAP155	P43612	1002 aa		5.13	□□□□□ -1.59
YPR158C-D	YPR158C-D	MET5	P47169	1442 aa		5.12	□□□□□ -1.59
YPR158C-D	YPR158C-D	DNF1	P32660	1571 aa		5.11	□□□□□ -1.59
YPR158C-D	YPR158C-D	THO2	P53552	1597 aa	Known RBP	5.11	□□□□□ -1.59
YPR158C-D	YPR158C-D	LAM6	Q08001	693 aa		5.1	□□□□□ -1.59
YPR158C-D	YPR158C-D	MDS3	P53094	1487 aa		5.07	□□□□□ -1.6
YPR158C-D	YPR158C-D	SPT7	P35177	1332 aa		5.07	□□□□□ -1.6
YPR158C-D	YPR158C-D	MET10	P39692	1035 aa		5.06	□□□□□ -1.6
YPR158C-D	YPR158C-D	ESC1	Q03661	1658 aa	Known RBP	5.06	□□□□□ -1.6
YPR158C-D	YPR158C-D	PAF1	P38351	445 aa		5.05	□□□□□ -1.6
YPR158C-D	YPR158C-D	ALD3	P54114	506 aa		5.05	□□□□□ -1.6
YPR158C-D	YPR158C-D	SSA1	P10591	642 aa	Known RBP	5.05	□□□□□ -1.6
YPR158C-D	YPR158C-D	EDE1	P34216	1381 aa		5.04	□□□□□ -1.6
YPR158C-D	YPR158C-D	PEX21	P50091	288 aa		5.04	□□□□□ -1.6
YPR158C-D	YPR158C-D	MAK10	Q02197	733 aa		5.03	□□□□□ -1.61
YPR158C-D	YPR158C-D	STH1	P32597	1359 aa		5.02	□□□□□ -1.61
YPR158C-D	YPR158C-D	YCF1	P39109	1515 aa	Known RBP	5.01	□□□□□ -1.61
YPR158C-D	YPR158C-D	YIL055C	P40523	627 aa	Known RBP	5.01	□□□□□ -1.61
YPR158C-D	YPR158C-D	YAP3	P38749	330 aa		5	□□□□□ -1.61
YPR158C-D	YPR158C-D	ZDS2	P54786	942 aa		5	□□□□□ -1.61
YPR158C-D	YPR158C-D	YMR074C	Q04773	145 aa		5	□□□□□ -1.61
YPR158C-D	YPR158C-D	RPS9B	P05755	195 aa	Known RBP	4.99	□□□□□ -1.61
YPR158C-D	YPR158C-D	SSK2	P53599	1579 aa		4.99	□□□□□ -1.61
YPR158C-D	YPR158C-D	TAF5	P38129	798 aa		4.99	□□□□□ -1.61
YPR158C-D	YPR158C-D	GTT3	P39996	337 aa		4.99	□□□□□ -1.61
YPR158C-D	YPR158C-D	YAH1	Q12184	172 aa	Known RBP	4.99	□□□□□ -1.61
YPR158C-D	YPR158C-D	AVT3	P36062	692 aa		4.98	□□□□□ -1.61
YPR158C-D	YPR158C-D	GLN1	P32288	370 aa	Known RBP	4.97	□□□□□ -1.61
YPR158C-D	YPR158C-D	PSD2	P53037	1138 aa	Known RBP	4.97	□□□□□ -1.61
YPR158C-D	YPR158C-D	SEN54	Q02825	467 aa	Predicted RBP	4.97	□□□□□ -1.61
YPR158C-D	YPR158C-D	IMH1	Q06704	911 aa	Known RBP	4.97	□□□□□ -1.61
YPR158C-D	YPR158C-D	AIM7	Q12156	149 aa		4.97	□□□□□ -1.61
YPR158C-D	YPR158C-D	LEO1	P38439	464 aa		4.97	□□□□□ -1.61
YPR158C-D	YPR158C-D	HPC2	Q01448	625 aa		4.96	□□□□□ -1.61
YPR158C-D	YPR158C-D	RSC30	P38781	883 aa		4.95	□□□□□ -1.62
YPR158C-D	YPR158C-D	TRM3	Q07527	1436 aa		4.95	□□□□□ -1.62
YPR158C-D	YPR158C-D	TIF4632	P39936	914 aa	Known RBP	4.93	□□□□□ -1.62
YPR158C-D	YPR158C-D	YEF3	P16521	1044 aa	Known RBP	4.91	□□□□□ -1.62
YPR158C-D	YPR158C-D	EAR1	Q03212	550 aa		4.91	□□□□□ -1.62
YPR158C-D	YPR158C-D	IFH1	P39520	1085 aa		4.9	□□□□□ -1.62
YPR158C-D	YPR158C-D	SMC4	Q12267	1418 aa		4.9	□□□□□ -1.63
YPR158C-D	YPR158C-D	CHD1	P32657	1468 aa		4.9	□□□□□ -1.63
YPR158C-D	YPR158C-D	CKB1	P43639	278 aa		4.9	□□□□□ -1.63
YPR158C-D	YPR158C-D	TOP2	P06786	1428 aa	Known RBP	4.9	□□□□□ -1.63
YPR158C-D	YPR158C-D	TFC8	Q12308	588 aa		4.89	□□□□□ -1.63
YPR158C-D	YPR158C-D	SSA2	P10592	639 aa	Known RBP	4.89	□□□□□ -1.63
YPR158C-D	YPR158C-D	YPK9	Q12697	1472 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms