RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C MTC1P47018 478 aaKnown RBP10.18□□□□□ -0.78
OTU1YFL044C DRS1P32892 752 aaKnown RBP9.89□□□□□ -0.83
OTU1YFL044C FAP1P53971 965 aa9.21□□□□□ -0.94
OTU1YFL044C MON2P48563 1636 aaPredicted RBP8.63□□□□□ -1.03
OTU1YFL044C PRY3P47033 881 aa8.63□□□□□ -1.03
OTU1YFL044C INO80P53115 1489 aa8.59□□□□□ -1.03
OTU1YFL044C BFR2Q06631 534 aaKnown RBP8.58□□□□□ -1.04
OTU1YFL044C PRI1P10363 409 aa8.51□□□□□ -1.05
OTU1YFL044C DIP2Q12220 943 aaPredicted RBP8.49□□□□□ -1.05
OTU1YFL044C AAD16Q02895 342 aa8.47□□□□□ -1.05
OTU1YFL044C ISW2Q08773 1120 aa8.44□□□□□ -1.06
OTU1YFL044C RPG1P38249 964 aaKnown RBP8.42□□□□□ -1.06
OTU1YFL044C AVT3P36062 692 aa8.28□□□□□ -1.08
OTU1YFL044C DNA2P38859 1522 aa8.23□□□□□ -1.09
OTU1YFL044C TSR3Q12094 313 aaKnown RBP8.18□□□□□ -1.1
OTU1YFL044C RSE1Q04693 1361 aaKnown RBP8.13□□□□□ -1.11
OTU1YFL044C TFA1P36100 482 aa8.1□□□□□ -1.11
OTU1YFL044C SWR1Q05471 1514 aa8.03□□□□□ -1.12
OTU1YFL044C YCK3P39962 524 aa8.02□□□□□ -1.13
OTU1YFL044C KOG1P38873 1557 aa7.97□□□□□ -1.13
OTU1YFL044C HAA1Q12753 694 aaKnown RBP7.95□□□□□ -1.14
OTU1YFL044C RPL17AP05740 184 aaKnown RBP7.92□□□□□ -1.14
OTU1YFL044C RPL17BP46990 184 aaKnown RBP7.92□□□□□ -1.14
OTU1YFL044C REB1P21538 810 aa7.89□□□□□ -1.15
OTU1YFL044C MRPL32P25348 183 aa7.8□□□□□ -1.16
OTU1YFL044C TY1B-DR4Q07793 1604 aa7.76□□□□□ -1.17
OTU1YFL044C TCB3Q03640 1545 aaKnown RBP7.74□□□□□ -1.17
OTU1YFL044C SPA2P23201 1466 aaKnown RBP7.7□□□□□ -1.18
OTU1YFL044C SGS1P35187 1447 aa7.52□□□□□ -1.21
OTU1YFL044C SPT21P35209 758 aa7.46□□□□□ -1.22
OTU1YFL044C CDC27P38042 758 aa7.43□□□□□ -1.22
OTU1YFL044C HSL1P34244 1518 aa7.42□□□□□ -1.22
OTU1YFL044C YKR023WP36119 530 aaKnown RBP7.41□□□□□ -1.22
OTU1YFL044C ECM5Q03214 1411 aa7.41□□□□□ -1.22
OTU1YFL044C SPT6P23615 1451 aaKnown RBP7.39□□□□□ -1.23
OTU1YFL044C YGL015CP33199 130 aa7.39□□□□□ -1.23
OTU1YFL044C DCD1P06773 312 aa7.37□□□□□ -1.23
OTU1YFL044C HOP09932 586 aa7.37□□□□□ -1.23
OTU1YFL044C THO2P53552 1597 aaKnown RBP7.25□□□□□ -1.25
OTU1YFL044C TFC8Q12308 588 aa7.25□□□□□ -1.25
OTU1YFL044C HIR3P47171 1648 aa7.25□□□□□ -1.25
OTU1YFL044C BUD4P47136 1447 aa7.25□□□□□ -1.25
OTU1YFL044C MDS3P53094 1487 aa7.24□□□□□ -1.25
OTU1YFL044C REV3P14284 1504 aa7.24□□□□□ -1.25
OTU1YFL044C RIM101P33400 625 aa7.24□□□□□ -1.25
OTU1YFL044C MIF2P35201 549 aa7.2□□□□□ -1.26
OTU1YFL044C MAP2P38174 421 aaKnown RBP7.19□□□□□ -1.26
OTU1YFL044C PEP1P32319 1579 aa7.16□□□□□ -1.26
OTU1YFL044C RQC2Q12532 1038 aaKnown RBP7.1□□□□□ -1.27
OTU1YFL044C BPT1P14772 1559 aa7.09□□□□□ -1.27
OTU1YFL044C SCY1P53009 804 aa7.09□□□□□ -1.27
OTU1YFL044C XRN1P22147 1528 aaKnown RBP7.07□□□□□ -1.28
OTU1YFL044C OXP1P28273 1286 aa7.06□□□□□ -1.28
OTU1YFL044C UBP10P53874 792 aaPredicted RBP7.06□□□□□ -1.28
OTU1YFL044C BCH2P36122 765 aa7.05□□□□□ -1.28
OTU1YFL044C PTP3P40048 928 aa7.04□□□□□ -1.28
OTU1YFL044C ATG2P53855 1592 aa7.03□□□□□ -1.28
OTU1YFL044C YIL055CP40523 627 aaKnown RBP7.02□□□□□ -1.29
OTU1YFL044C YAH1Q12184 172 aaKnown RBP7.01□□□□□ -1.29
OTU1YFL044C YFR006WP43590 535 aa6.97□□□□□ -1.29
OTU1YFL044C YCF1P39109 1515 aaKnown RBP6.95□□□□□ -1.3
OTU1YFL044C SSP1P38871 571 aa6.94□□□□□ -1.3
OTU1YFL044C SLX5P32828 619 aaKnown RBP6.93□□□□□ -1.3
OTU1YFL044C SSK2P53599 1579 aa6.93□□□□□ -1.3
OTU1YFL044C SIN3P22579 1536 aa6.91□□□□□ -1.3
OTU1YFL044C BNI1P41832 1953 aa6.9□□□□□ -1.3
OTU1YFL044C SSN2P38931 1420 aa6.89□□□□□ -1.31
OTU1YFL044C EPS1P40557 701 aa6.88□□□□□ -1.31
OTU1YFL044C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
OTU1YFL044C TAF2P23255 1407 aa6.86□□□□□ -1.31
OTU1YFL044C TIF4632P39936 914 aaKnown RBP6.85□□□□□ -1.31
OTU1YFL044C RSM7P47150 247 aa6.85□□□□□ -1.31
OTU1YFL044C BDF1P35817 686 aa6.84□□□□□ -1.31
OTU1YFL044C MYO2P19524 1574 aaKnown RBP6.82□□□□□ -1.32
OTU1YFL044C YLR271WQ06152 274 aa6.82□□□□□ -1.32
OTU1YFL044C ESP1Q03018 1630 aa6.82□□□□□ -1.32
OTU1YFL044C SKI3P17883 1432 aaKnown RBP6.82□□□□□ -1.32
OTU1YFL044C AI2P03876 854 aa6.8□□□□□ -1.32
OTU1YFL044C CDC25P04821 1589 aa6.79□□□□□ -1.32
OTU1YFL044C ABP1P15891 592 aaKnown RBP6.78□□□□□ -1.32
OTU1YFL044C TGL3P40308 642 aa6.77□□□□□ -1.33
OTU1YFL044C BBC1P47068 1157 aa6.77□□□□□ -1.33
OTU1YFL044C LTE1P07866 1435 aa6.76□□□□□ -1.33
OTU1YFL044C MET5P47169 1442 aa6.76□□□□□ -1.33
OTU1YFL044C DMA1P38823 416 aa6.76□□□□□ -1.33
OTU1YFL044C DNF1P32660 1571 aa6.76□□□□□ -1.33
OTU1YFL044C RPA190P10964 1664 aaKnown RBP6.76□□□□□ -1.33
OTU1YFL044C ITT1Q04638 464 aa6.75□□□□□ -1.33
OTU1YFL044C UFD4P33202 1483 aa6.74□□□□□ -1.33
OTU1YFL044C YPK9Q12697 1472 aa6.73□□□□□ -1.33
OTU1YFL044C SCC2Q04002 1493 aa6.72□□□□□ -1.33
OTU1YFL044C ESC1Q03661 1658 aaKnown RBP6.71□□□□□ -1.33
OTU1YFL044C MGA2P40578 1113 aa6.7□□□□□ -1.34
OTU1YFL044C TY2B-LR1P0C2J3 1770 aa6.69□□□□□ -1.34
OTU1YFL044C TY2B-FP0CX63 1770 aa6.69□□□□□ -1.34
OTU1YFL044C TY2B-GR2P0CX64 1770 aa6.69□□□□□ -1.34
OTU1YFL044C TY2B-CP25384 1770 aa6.69□□□□□ -1.34
OTU1YFL044C TY2B-DR2Q03494 1770 aa6.69□□□□□ -1.34
OTU1YFL044C TY1B-DR1Q03855 1755 aa6.69□□□□□ -1.34
OTU1YFL044C TY2B-DR3Q07791 1770 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms