RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	DRS1	P32892	752 aa	Known RBP	10.07	□□□□□ -0.8
VAM10	YOR068C	MTC1	P47018	478 aa	Known RBP	9.99	□□□□□ -0.81
VAM10	YOR068C	BFR2	Q06631	534 aa	Known RBP	8.73	□□□□□ -1.01
VAM10	YOR068C	DIP2	Q12220	943 aa	Predicted RBP	8.55	□□□□□ -1.04
VAM10	YOR068C	AVT3	P36062	692 aa		8.47	□□□□□ -1.05
VAM10	YOR068C	TFA1	P36100	482 aa		8.25	□□□□□ -1.09
VAM10	YOR068C	FAP1	P53971	965 aa		8.11	□□□□□ -1.11
VAM10	YOR068C	ISW2	Q08773	1120 aa		8.08	□□□□□ -1.12
VAM10	YOR068C	RSE1	Q04693	1361 aa	Known RBP	8.05	□□□□□ -1.12
VAM10	YOR068C	PRI1	P10363	409 aa		7.99	□□□□□ -1.13
VAM10	YOR068C	RPG1	P38249	964 aa	Known RBP	7.99	□□□□□ -1.13
VAM10	YOR068C	AAD16	Q02895	342 aa		7.83	□□□□□ -1.16
VAM10	YOR068C	RPL17A	P05740	184 aa	Known RBP	7.77	□□□□□ -1.17
VAM10	YOR068C	RPL17B	P46990	184 aa	Known RBP	7.77	□□□□□ -1.17
VAM10	YOR068C	REB1	P21538	810 aa		7.64	□□□□□ -1.19
VAM10	YOR068C	PRY3	P47033	881 aa		7.6	□□□□□ -1.19
VAM10	YOR068C	TSR3	Q12094	313 aa	Known RBP	7.6	□□□□□ -1.19
VAM10	YOR068C	SPT21	P35209	758 aa		7.52	□□□□□ -1.21
VAM10	YOR068C	RIM101	P33400	625 aa		7.4	□□□□□ -1.22
VAM10	YOR068C	YCK3	P39962	524 aa		7.27	□□□□□ -1.25
VAM10	YOR068C	MRPL32	P25348	183 aa		7.26	□□□□□ -1.25
VAM10	YOR068C	YKR023W	P36119	530 aa	Known RBP	7.25	□□□□□ -1.25
VAM10	YOR068C	OXP1	P28273	1286 aa		7.19	□□□□□ -1.26
VAM10	YOR068C	PTP3	P40048	928 aa		7.17	□□□□□ -1.26
VAM10	YOR068C	HAA1	Q12753	694 aa	Known RBP	7.16	□□□□□ -1.26
VAM10	YOR068C	HO	P09932	586 aa		7.1	□□□□□ -1.27
VAM10	YOR068C	CDC27	P38042	758 aa		7.09	□□□□□ -1.27
VAM10	YOR068C	TFC8	Q12308	588 aa		7.09	□□□□□ -1.27
VAM10	YOR068C	SSP1	P38871	571 aa		7.08	□□□□□ -1.28
VAM10	YOR068C	YAH1	Q12184	172 aa	Known RBP	7.07	□□□□□ -1.28
VAM10	YOR068C	DCD1	P06773	312 aa		7.06	□□□□□ -1.28
VAM10	YOR068C	YIL055C	P40523	627 aa	Known RBP	7.02	□□□□□ -1.29
VAM10	YOR068C	RQC2	Q12532	1038 aa	Known RBP	6.99	□□□□□ -1.29
VAM10	YOR068C	YLR271W	Q06152	274 aa		6.98	□□□□□ -1.29
VAM10	YOR068C	RSM7	P47150	247 aa		6.94	□□□□□ -1.3
VAM10	YOR068C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.93	□□□□□ -1.3	not detected
VAM10	YOR068C	BCH2	P36122	765 aa		6.89	□□□□□ -1.31
VAM10	YOR068C	AI2	P03876	854 aa		6.83	□□□□□ -1.32
VAM10	YOR068C	DMA1	P38823	416 aa		6.81	□□□□□ -1.32
VAM10	YOR068C	MGA2	P40578	1113 aa		6.81	□□□□□ -1.32
VAM10	YOR068C	PSD2	P53037	1138 aa	Known RBP	6.8	□□□□□ -1.32
VAM10	YOR068C	CST9	Q06032	482 aa		6.79	□□□□□ -1.32
VAM10	YOR068C	MAP2	P38174	421 aa	Known RBP	6.77	□□□□□ -1.33
VAM10	YOR068C	EPS1	P40557	701 aa		6.77	□□□□□ -1.33
VAM10	YOR068C	SCY1	P53009	804 aa		6.77	□□□□□ -1.33
VAM10	YOR068C	UBP10	P53874	792 aa	Predicted RBP	6.76	□□□□□ -1.33
VAM10	YOR068C	YGL015C	P33199	130 aa		6.75	□□□□□ -1.33
VAM10	YOR068C	BBC1	P47068	1157 aa		6.75	□□□□□ -1.33
VAM10	YOR068C	BDF1	P35817	686 aa		6.72	□□□□□ -1.33
VAM10	YOR068C	MRM1	P25270	412 aa		6.63	□□□□□ -1.35
VAM10	YOR068C	SLX5	P32828	619 aa	Known RBP	6.61	□□□□□ -1.35
VAM10	YOR068C	RCR1	P38212	213 aa		6.56	□□□□□ -1.36
VAM10	YOR068C	RAM2	P29703	316 aa		6.54	□□□□□ -1.36
VAM10	YOR068C	RTG3	P38165	486 aa		6.52	□□□□□ -1.37
VAM10	YOR068C	VPS29	P38759	282 aa		6.47	□□□□□ -1.37
VAM10	YOR068C	TIF4632	P39936	914 aa	Known RBP	6.45	□□□□□ -1.38
VAM10	YOR068C	SAS10	Q12136	610 aa	Predicted RBP	6.44	□□□□□ -1.38
VAM10	YOR068C	MAK11	P20484	414 aa	Known RBP	6.41	□□□□□ -1.38
VAM10	YOR068C	TGL3	P40308	642 aa		6.41	□□□□□ -1.38
VAM10	YOR068C	STS1	P38637	319 aa		6.39	□□□□□ -1.39
VAM10	YOR068C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	6.39	□□□□□ -1.39	not detected
VAM10	YOR068C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	6.38	□□□□□ -1.39	not detected
VAM10	YOR068C	SET1	P38827	1080 aa	Known RBP	6.38	□□□□□ -1.39
VAM10	YOR068C	YFR006W	P43590	535 aa		6.36	□□□□□ -1.39
VAM10	YOR068C	YOR238W	Q08634	303 aa		6.36	□□□□□ -1.39
VAM10	YOR068C	DBP1	P24784	617 aa	Known RBP	6.35	□□□□□ -1.39
VAM10	YOR068C	COQ8	P27697	501 aa		6.33	□□□□□ -1.4
VAM10	YOR068C	YAP5	P40574	245 aa		6.33	□□□□□ -1.4
VAM10	YOR068C	YPR148C	Q06523	435 aa		6.31	□□□□□ -1.4
VAM10	YOR068C	PIB1	Q06651	286 aa		6.31	□□□□□ -1.4
VAM10	YOR068C	EDS1	P38073	919 aa		6.3	□□□□□ -1.4
VAM10	YOR068C	MIF2	P35201	549 aa		6.28	□□□□□ -1.4
VAM10	YOR068C	VPS70	P47161	811 aa		6.27	□□□□□ -1.41
VAM10	YOR068C	IFH1	P39520	1085 aa		6.26	□□□□□ -1.41
VAM10	YOR068C	MST1	P07236	462 aa		6.25	□□□□□ -1.41
VAM10	YOR068C	VMA1	P17255	1071 aa	Known RBP	6.24	□□□□□ -1.41
VAM10	YOR068C	LEU3	P08638	886 aa		6.23	□□□□□ -1.41
VAM10	YOR068C	NOP53	Q12080	455 aa	Known RBP	6.23	□□□□□ -1.41
VAM10	YOR068C	PTC3	P34221	468 aa	Known RBP	6.22	□□□□□ -1.41
VAM10	YOR068C	CKB1	P43639	278 aa		6.2	□□□□□ -1.42
VAM10	YOR068C	SAM3	Q08986	587 aa		6.17	□□□□□ -1.42
VAM10	YOR068C	GTT3	P39996	337 aa		6.15	□□□□□ -1.42
VAM10	YOR068C	SPB4	P25808	606 aa	Predicted RBP	6.14	□□□□□ -1.43
VAM10	YOR068C	LEO1	P38439	464 aa		6.14	□□□□□ -1.43
VAM10	YOR068C	ATH1	P48016	1211 aa		6.13	□□□□□ -1.43
VAM10	YOR068C	GRE2	Q12068	342 aa	Known RBP	6.13	□□□□□ -1.43
VAM10	YOR068C	PBS2	P08018	668 aa		6.12	□□□□□ -1.43
VAM10	YOR068C	TAF7	Q05021	590 aa		6.12	□□□□□ -1.43
VAM10	YOR068C	GUT1	P32190	709 aa		6.11	□□□□□ -1.43
VAM10	YOR068C	DSF2	P38213	736 aa		6.11	□□□□□ -1.43
VAM10	YOR068C	REF2	P42073	533 aa	Predicted RBP	6.11	□□□□□ -1.43
VAM10	YOR068C	YOL036W	Q08206	761 aa		6.11	□□□□□ -1.43
VAM10	YOR068C	GYP5	Q12344	894 aa		6.11	□□□□□ -1.43
VAM10	YOR068C	SET4	P42948	560 aa		6.08	□□□□□ -1.44
VAM10	YOR068C	SOL3	P38858	249 aa		6.07	□□□□□ -1.44
VAM10	YOR068C	VHR2	P40041	505 aa		6.06	□□□□□ -1.44
VAM10	YOR068C	WSC3	Q12215	556 aa		6.06	□□□□□ -1.44
VAM10	YOR068C	DCW1	P36091	449 aa		6.05	□□□□□ -1.44
VAM10	YOR068C	YGR273C	P53329	174 aa		6.05	□□□□□ -1.44
VAM10	YOR068C	MSB4	Q12317	492 aa		6.05	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 121 ms