RNA–Protein interactions for RNA: YHR071W

PCL5, Transcript of Cyclin, yeastyeast

Gene PCL5, Length 690 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCL5YHR071W FAP1P53971 965 aa15□□□□□ -0.01
PCL5YHR071W PRY3P47033 881 aa14.2□□□□□ -0.14
PCL5YHR071W MTC1P47018 478 aaKnown RBP13.98□□□□□ -0.17
PCL5YHR071W YCK3P39962 524 aa13.33□□□□□ -0.28
PCL5YHR071W HAA1Q12753 694 aaKnown RBP13.19□□□□□ -0.3
PCL5YHR071W AAD16Q02895 342 aa13.18□□□□□ -0.3
PCL5YHR071W PRI1P10363 409 aa13□□□□□ -0.33
PCL5YHR071W TSR3Q12094 313 aaKnown RBP12.16□□□□□ -0.46
PCL5YHR071W ISW2Q08773 1120 aa12.07□□□□□ -0.48
PCL5YHR071W RPG1P38249 964 aaKnown RBP11.99□□□□□ -0.49
PCL5YHR071W YGL015CP33199 130 aa11.8□□□□□ -0.52
PCL5YHR071W BUD31P25337 157 aaPredicted RBP11.79□□□□□ -0.52
PCL5YHR071W MRPL32P25348 183 aa11.69□□□□□ -0.54
PCL5YHR071W SIS1P25294 352 aaKnown RBP11□□□□□ -0.65
PCL5YHR071W DRS1P32892 752 aaKnown RBP10.93□□□□□ -0.66
PCL5YHR071W CDC27P38042 758 aa10.73□□□□□ -0.69
PCL5YHR071W UBP10P53874 792 aaPredicted RBP10.71□□□□□ -0.69
PCL5YHR071W MAP2P38174 421 aaKnown RBP10.65□□□□□ -0.7
PCL5YHR071W UBP9P39967 754 aa10.61□□□□□ -0.71
PCL5YHR071W RSE1Q04693 1361 aaKnown RBP10.6□□□□□ -0.71
PCL5YHR071W REB1P21538 810 aa10.56□□□□□ -0.72
PCL5YHR071W RPL17AP05740 184 aaKnown RBP10.4□□□□□ -0.74
PCL5YHR071W RPL17BP46990 184 aaKnown RBP10.4□□□□□ -0.74
PCL5YHR071W DIP2Q12220 943 aaPredicted RBP10.35□□□□□ -0.75
PCL5YHR071W TIF4632P39936 914 aaKnown RBP10.29□□□□□ -0.76
PCL5YHR071W TGL3P40308 642 aa10.27□□□□□ -0.77
PCL5YHR071W YKR023WP36119 530 aaKnown RBP10.19□□□□□ -0.78
PCL5YHR071W SCY1P53009 804 aa10.06□□□□□ -0.8
PCL5YHR071W SLX5P32828 619 aaKnown RBP10.05□□□□□ -0.8
PCL5YHR071W DCD1P06773 312 aa10.01□□□□□ -0.81
PCL5YHR071W HOP09932 586 aa9.98□□□□□ -0.81
PCL5YHR071W TFC8Q12308 588 aa9.98□□□□□ -0.81
PCL5YHR071W SPT21P35209 758 aa9.82□□□□□ -0.84
PCL5YHR071W YBL029C-AQ3E756 94 aa9.8□□□□□ -0.84
PCL5YHR071W MST1P07236 462 aa9.6□□□□□ -0.87
PCL5YHR071W BCH2P36122 765 aa9.57□□□□□ -0.88
PCL5YHR071W VNX1P42839 908 aa9.57□□□□□ -0.88
PCL5YHR071W YJL171CP46992 396 aa9.56□□□□□ -0.88
PCL5YHR071W AIR2Q12476 344 aaKnown RBP9.55□□□□□ -0.88
PCL5YHR071W SPP1Q03012 353 aa9.5□□□□□ -0.89
PCL5YHR071W FKH1P40466 484 aa9.45□□□□□ -0.9
PCL5YHR071W YOR238WQ08634 303 aa9.44□□□□□ -0.9
PCL5YHR071W AVT3P36062 692 aa9.39□□□□□ -0.91
PCL5YHR071W WSC3Q12215 556 aa9.3□□□□□ -0.92
PCL5YHR071W BMT6Q12291 365 aa9.25□□□□□ -0.93
PCL5YHR071W TIF11P38912 153 aaKnown RBP9.24□□□□□ -0.93
PCL5YHR071W NSR1P27476 414 aaKnown RBP RIP-Chip data9.21□□□□□ -0.94not detected
PCL5YHR071W BDF1P35817 686 aa9.2□□□□□ -0.94
PCL5YHR071W EPS1P40557 701 aa9.18□□□□□ -0.94
PCL5YHR071W LDB19Q12502 818 aa9.13□□□□□ -0.95
PCL5YHR071W YAP5P40574 245 aa9.09□□□□□ -0.95
PCL5YHR071W RGA2Q06407 1009 aa9.02□□□□□ -0.97
PCL5YHR071W RIM101P33400 625 aa8.98□□□□□ -0.97
PCL5YHR071W ULI1P43604 169 aa8.98□□□□□ -0.97
PCL5YHR071W IOC2Q12072 812 aa8.98□□□□□ -0.97
PCL5YHR071W GTT3P39996 337 aa8.96□□□□□ -0.98
PCL5YHR071W BCK2P33306 851 aa8.76□□□□□ -1.01
PCL5YHR071W RTG1P32607 177 aa8.75□□□□□ -1.01
PCL5YHR071W NCR1Q12200 1170 aa8.73□□□□□ -1.01
PCL5YHR071W EAP1P36041 632 aaKnown RBP8.67□□□□□ -1.02
PCL5YHR071W MSB4Q12317 492 aa8.66□□□□□ -1.02
PCL5YHR071W BBC1P47068 1157 aa8.64□□□□□ -1.03
PCL5YHR071W OXP1P28273 1286 aa8.6□□□□□ -1.03
PCL5YHR071W SEC61P32915 480 aa8.6□□□□□ -1.03
PCL5YHR071W PTP3P40048 928 aa8.59□□□□□ -1.03
PCL5YHR071W TRP5P00931 707 aaKnown RBP8.58□□□□□ -1.04
PCL5YHR071W PIB1Q06651 286 aa8.58□□□□□ -1.04
PCL5YHR071W RGA1P39083 1007 aa8.57□□□□□ -1.04
PCL5YHR071W YNL035CP53962 389 aaKnown RBP8.56□□□□□ -1.04
PCL5YHR071W BFR2Q06631 534 aaKnown RBP8.55□□□□□ -1.04
PCL5YHR071W CHL1P22516 861 aaPredicted RBP8.51□□□□□ -1.05
PCL5YHR071W SET4P42948 560 aa8.49□□□□□ -1.05
PCL5YHR071W AI2P03876 854 aa8.48□□□□□ -1.05
PCL5YHR071W YIL055CP40523 627 aaKnown RBP8.48□□□□□ -1.05
PCL5YHR071W YOL036WQ08206 761 aa8.48□□□□□ -1.05
PCL5YHR071W SAP30P38429 201 aa8.47□□□□□ -1.05
PCL5YHR071W TFG1P41895 735 aaPredicted RBP8.47□□□□□ -1.05
PCL5YHR071W PRE3P38624 215 aa8.41□□□□□ -1.06
PCL5YHR071W XDJ1P39102 459 aa8.4□□□□□ -1.06
PCL5YHR071W RSM7P47150 247 aa8.37□□□□□ -1.07
PCL5YHR071W DPS1P04802 557 aaKnown RBP8.36□□□□□ -1.07
PCL5YHR071W YDL129WQ07555 291 aa8.32□□□□□ -1.08
PCL5YHR071W VRP1P37370 817 aa8.3□□□□□ -1.08
PCL5YHR071W DAN4P47179 1161 aa8.28□□□□□ -1.08
PCL5YHR071W SRC1Q03707 834 aa8.21□□□□□ -1.1
PCL5YHR071W JIP4Q03361 876 aa8.2□□□□□ -1.1
PCL5YHR071W SAM3Q08986 587 aa8.13□□□□□ -1.11
PCL5YHR071W VMA1P17255 1071 aaKnown RBP8.11□□□□□ -1.11
PCL5YHR071W TFA1P36100 482 aa8.07□□□□□ -1.12
PCL5YHR071W MRM1P25270 412 aa8.06□□□□□ -1.12
PCL5YHR071W YAH1Q12184 172 aaKnown RBP8.06□□□□□ -1.12
PCL5YHR071W YDR344CQ05510 147 aa8.05□□□□□ -1.12
PCL5YHR071W DBP1P24784 617 aaKnown RBP8.04□□□□□ -1.12
PCL5YHR071W YMR1P47147 688 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
PCL5YHR071W ABP1P15891 592 aaKnown RBP8.01□□□□□ -1.13
PCL5YHR071W YFR006WP43590 535 aa8□□□□□ -1.13
PCL5YHR071W PSD2P53037 1138 aaKnown RBP8□□□□□ -1.13
PCL5YHR071W ELP4Q02884 456 aaKnown RBP8□□□□□ -1.13
PCL5YHR071W PTC4P38089 393 aa7.98□□□□□ -1.13
PCL5YHR071W HTA1P04911 132 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms