RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C MTC1P47018 478 aaKnown RBP10.86□□□□□ -0.67
HRD1YOL013C DRS1P32892 752 aaKnown RBP10.47□□□□□ -0.73
HRD1YOL013C FAP1P53971 965 aa9.45□□□□□ -0.9
HRD1YOL013C DIP2Q12220 943 aaPredicted RBP9.07□□□□□ -0.96
HRD1YOL013C PRI1P10363 409 aa8.99□□□□□ -0.97
HRD1YOL013C ISW2Q08773 1120 aa8.97□□□□□ -0.97
HRD1YOL013C AAD16Q02895 342 aa8.91□□□□□ -0.98
HRD1YOL013C BFR2Q06631 534 aaKnown RBP8.85□□□□□ -0.99
HRD1YOL013C PRY3P47033 881 aa8.85□□□□□ -0.99
HRD1YOL013C RPG1P38249 964 aaKnown RBP8.84□□□□□ -0.99
HRD1YOL013C AVT3P36062 692 aa8.81□□□□□ -1
HRD1YOL013C RSE1Q04693 1361 aaKnown RBP8.69□□□□□ -1.02
HRD1YOL013C TSR3Q12094 313 aaKnown RBP8.5□□□□□ -1.05
HRD1YOL013C RPL17AP05740 184 aaKnown RBP8.37□□□□□ -1.07
HRD1YOL013C RPL17BP46990 184 aaKnown RBP8.37□□□□□ -1.07
HRD1YOL013C HAA1Q12753 694 aaKnown RBP8.36□□□□□ -1.07
HRD1YOL013C REB1P21538 810 aa8.34□□□□□ -1.08
HRD1YOL013C YCK3P39962 524 aa8.29□□□□□ -1.08
HRD1YOL013C MRPL32P25348 183 aa8.21□□□□□ -1.1
HRD1YOL013C TFA1P36100 482 aa8.02□□□□□ -1.13
HRD1YOL013C SPT21P35209 758 aa8.01□□□□□ -1.13
HRD1YOL013C YKR023WP36119 530 aaKnown RBP7.86□□□□□ -1.15
HRD1YOL013C RIM101P33400 625 aa7.83□□□□□ -1.16
HRD1YOL013C YGL015CP33199 130 aa7.8□□□□□ -1.16
HRD1YOL013C CDC27P38042 758 aa7.79□□□□□ -1.16
HRD1YOL013C TFC8Q12308 588 aa7.72□□□□□ -1.17
HRD1YOL013C HOP09932 586 aa7.7□□□□□ -1.18
HRD1YOL013C DCD1P06773 312 aa7.63□□□□□ -1.19
HRD1YOL013C UBP10P53874 792 aaPredicted RBP7.58□□□□□ -1.2
HRD1YOL013C OXP1P28273 1286 aa7.55□□□□□ -1.2
HRD1YOL013C MAP2P38174 421 aaKnown RBP7.53□□□□□ -1.2
HRD1YOL013C YIL055CP40523 627 aaKnown RBP7.51□□□□□ -1.21
HRD1YOL013C BCH2P36122 765 aa7.47□□□□□ -1.21
HRD1YOL013C PTP3P40048 928 aa7.47□□□□□ -1.21
HRD1YOL013C SCY1P53009 804 aa7.44□□□□□ -1.22
HRD1YOL013C YAH1Q12184 172 aaKnown RBP7.39□□□□□ -1.23
HRD1YOL013C RSM7P47150 247 aa7.37□□□□□ -1.23
HRD1YOL013C SLX5P32828 619 aaKnown RBP7.35□□□□□ -1.23
HRD1YOL013C TIF4632P39936 914 aaKnown RBP7.31□□□□□ -1.24
HRD1YOL013C EPS1P40557 701 aa7.31□□□□□ -1.24
HRD1YOL013C BBC1P47068 1157 aa7.29□□□□□ -1.24
HRD1YOL013C SSP1P38871 571 aa7.28□□□□□ -1.24
HRD1YOL013C BDF1P35817 686 aa7.28□□□□□ -1.24
HRD1YOL013C YLR271WQ06152 274 aa7.28□□□□□ -1.24
HRD1YOL013C AI2P03876 854 aa7.26□□□□□ -1.25
HRD1YOL013C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
HRD1YOL013C TGL3P40308 642 aa7.25□□□□□ -1.25
HRD1YOL013C PSD2P53037 1138 aaKnown RBP7.14□□□□□ -1.27
HRD1YOL013C MGA2P40578 1113 aa7.09□□□□□ -1.27
HRD1YOL013C MRM1P25270 412 aa7.02□□□□□ -1.29
HRD1YOL013C CST9Q06032 482 aa7.02□□□□□ -1.29
HRD1YOL013C NSR1P27476 414 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
HRD1YOL013C BUD31P25337 157 aaPredicted RBP6.98□□□□□ -1.29
HRD1YOL013C YAP5P40574 245 aa6.98□□□□□ -1.29
HRD1YOL013C YOR238WQ08634 303 aa6.98□□□□□ -1.29
HRD1YOL013C MST1P07236 462 aa6.96□□□□□ -1.3
HRD1YOL013C UBP9P39967 754 aa6.96□□□□□ -1.3
HRD1YOL013C RTG3P38165 486 aa6.91□□□□□ -1.3
HRD1YOL013C YMR1P47147 688 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
HRD1YOL013C VPS29P38759 282 aa6.84□□□□□ -1.31
HRD1YOL013C RCR1P38212 213 aa6.82□□□□□ -1.32
HRD1YOL013C GTT3P39996 337 aa6.81□□□□□ -1.32
HRD1YOL013C PIB1Q06651 286 aa6.81□□□□□ -1.32
HRD1YOL013C DBP1P24784 617 aaKnown RBP6.8□□□□□ -1.32
HRD1YOL013C YBL029C-AQ3E756 94 aa6.78□□□□□ -1.32
HRD1YOL013C YFR006WP43590 535 aa6.76□□□□□ -1.33
HRD1YOL013C STS1P38637 319 aa6.75□□□□□ -1.33
HRD1YOL013C VNX1P42839 908 aa6.74□□□□□ -1.33
HRD1YOL013C WSC3Q12215 556 aa6.74□□□□□ -1.33
HRD1YOL013C RAM2P29703 316 aa6.71□□□□□ -1.33
HRD1YOL013C SIS1P25294 352 aaKnown RBP6.71□□□□□ -1.34
HRD1YOL013C SPP1Q03012 353 aa6.71□□□□□ -1.34
HRD1YOL013C VMA1P17255 1071 aaKnown RBP6.69□□□□□ -1.34
HRD1YOL013C MAK11P20484 414 aaKnown RBP6.68□□□□□ -1.34
HRD1YOL013C TIF11P38912 153 aaKnown RBP6.67□□□□□ -1.34
HRD1YOL013C MSB4Q12317 492 aa6.67□□□□□ -1.34
HRD1YOL013C SAM3Q08986 587 aa6.65□□□□□ -1.34
HRD1YOL013C EAP1P36041 632 aaKnown RBP6.63□□□□□ -1.35
HRD1YOL013C YOL036WQ08206 761 aa6.63□□□□□ -1.35
HRD1YOL013C SET4P42948 560 aa6.62□□□□□ -1.35
HRD1YOL013C MIF2P35201 549 aa6.61□□□□□ -1.35
HRD1YOL013C ULI1P43604 169 aa6.61□□□□□ -1.35
HRD1YOL013C COQ8P27697 501 aa6.58□□□□□ -1.36
HRD1YOL013C GYP5Q12344 894 aa6.58□□□□□ -1.36
HRD1YOL013C ABP1P15891 592 aaKnown RBP6.58□□□□□ -1.36
HRD1YOL013C IOC2Q12072 812 aa6.56□□□□□ -1.36
HRD1YOL013C TRP5P00931 707 aaKnown RBP6.55□□□□□ -1.36
HRD1YOL013C EDS1P38073 919 aa6.55□□□□□ -1.36
HRD1YOL013C GRE2Q12068 342 aaKnown RBP6.55□□□□□ -1.36
HRD1YOL013C NOP53Q12080 455 aaKnown RBP6.55□□□□□ -1.36
HRD1YOL013C LDB19Q12502 818 aa6.55□□□□□ -1.36
HRD1YOL013C PTC3P34221 468 aaKnown RBP6.54□□□□□ -1.36
HRD1YOL013C RQC2Q12532 1038 aaKnown RBP6.54□□□□□ -1.36
HRD1YOL013C HTA1P04911 132 aaKnown RBP6.52□□□□□ -1.37
HRD1YOL013C HTA2P04912 132 aa6.52□□□□□ -1.37
HRD1YOL013C DCW1P36091 449 aa6.52□□□□□ -1.37
HRD1YOL013C ATH1P48016 1211 aa6.52□□□□□ -1.37
HRD1YOL013C GUT1P32190 709 aa6.5□□□□□ -1.37
HRD1YOL013C SET1P38827 1080 aaKnown RBP6.49□□□□□ -1.37
HRD1YOL013C FKH1P40466 484 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms