RNA–Protein interactions for RNA: YBR049C

REB1, Transcript of RNA polymerase I enhancer binding protein, yeastyeast

Gene REB1, Length 2,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
REB1YBR049C DRS1P32892 752 aaKnown RBP8.68□□□□□ -1.02
REB1YBR049C MTC1P47018 478 aaKnown RBP8.19□□□□□ -1.1
REB1YBR049C BFR2Q06631 534 aaKnown RBP7.71□□□□□ -1.17
REB1YBR049C TFA1P36100 482 aa7.58□□□□□ -1.2
REB1YBR049C AVT3P36062 692 aa7.27□□□□□ -1.25
REB1YBR049C DIP2Q12220 943 aaPredicted RBP7.23□□□□□ -1.25
REB1YBR049C RQC2Q12532 1038 aaKnown RBP6.95□□□□□ -1.3
REB1YBR049C RSE1Q04693 1361 aaKnown RBP6.71□□□□□ -1.34
REB1YBR049C ISW2Q08773 1120 aa6.57□□□□□ -1.36
REB1YBR049C FAP1P53971 965 aa6.51□□□□□ -1.37
REB1YBR049C RPG1P38249 964 aaKnown RBP6.46□□□□□ -1.38
REB1YBR049C RPL17AP05740 184 aaKnown RBP6.42□□□□□ -1.38
REB1YBR049C RPL17BP46990 184 aaKnown RBP6.42□□□□□ -1.38
REB1YBR049C DMA1P38823 416 aa6.41□□□□□ -1.38
REB1YBR049C PRI1P10363 409 aa6.31□□□□□ -1.4
REB1YBR049C REB1P21538 810 aa6.31□□□□□ -1.4
REB1YBR049C PTP3P40048 928 aa6.3□□□□□ -1.4
REB1YBR049C MIF2P35201 549 aa6.28□□□□□ -1.4
REB1YBR049C TAF7Q05021 590 aa6.26□□□□□ -1.41
REB1YBR049C RIM101P33400 625 aa6.25□□□□□ -1.41
REB1YBR049C SPT21P35209 758 aa6.21□□□□□ -1.41
REB1YBR049C SSP1P38871 571 aa6.18□□□□□ -1.42
REB1YBR049C AAD16Q02895 342 aa6.15□□□□□ -1.43
REB1YBR049C LEO1P38439 464 aa6.1□□□□□ -1.43
REB1YBR049C PRY3P47033 881 aa6.09□□□□□ -1.43
REB1YBR049C OXP1P28273 1286 aa6.06□□□□□ -1.44
REB1YBR049C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
REB1YBR049C YAH1Q12184 172 aaKnown RBP6.02□□□□□ -1.45
REB1YBR049C TSR3Q12094 313 aaKnown RBP6.01□□□□□ -1.45
REB1YBR049C YIL055CP40523 627 aaKnown RBP5.99□□□□□ -1.45
REB1YBR049C YLR271WQ06152 274 aa5.97□□□□□ -1.45
REB1YBR049C SAS10Q12136 610 aaPredicted RBP5.94□□□□□ -1.46
REB1YBR049C LEU3P08638 886 aa5.93□□□□□ -1.46
REB1YBR049C YKR023WP36119 530 aaKnown RBP5.91□□□□□ -1.46
REB1YBR049C MGA2P40578 1113 aa5.91□□□□□ -1.46
REB1YBR049C RSM7P47150 247 aa5.88□□□□□ -1.47
REB1YBR049C CST9Q06032 482 aa5.8□□□□□ -1.48
REB1YBR049C TFC8Q12308 588 aa5.8□□□□□ -1.48
REB1YBR049C MRPL32P25348 183 aa5.79□□□□□ -1.48
REB1YBR049C HOP09932 586 aa5.78□□□□□ -1.48
REB1YBR049C PSD2P53037 1138 aaKnown RBP5.76□□□□□ -1.49
REB1YBR049C AI2P03876 854 aa5.74□□□□□ -1.49
REB1YBR049C RPN1P38764 993 aaKnown RBP5.74□□□□□ -1.49
REB1YBR049C DCD1P06773 312 aa5.72□□□□□ -1.49
REB1YBR049C BBC1P47068 1157 aa5.69□□□□□ -1.5
REB1YBR049C HAA1Q12753 694 aaKnown RBP5.69□□□□□ -1.5
REB1YBR049C CDC27P38042 758 aa5.67□□□□□ -1.5
REB1YBR049C RAM2P29703 316 aa5.66□□□□□ -1.5
REB1YBR049C SET1P38827 1080 aaKnown RBP5.66□□□□□ -1.5
REB1YBR049C CKB1P43639 278 aa5.66□□□□□ -1.5
REB1YBR049C DMA2P53924 522 aa5.65□□□□□ -1.5
REB1YBR049C SPB4P25808 606 aaPredicted RBP5.65□□□□□ -1.51
REB1YBR049C BCH2P36122 765 aa5.65□□□□□ -1.51
REB1YBR049C YPR148CQ06523 435 aa5.63□□□□□ -1.51
REB1YBR049C IFH1P39520 1085 aa5.63□□□□□ -1.51
REB1YBR049C VPS70P47161 811 aa5.62□□□□□ -1.51
REB1YBR049C MRM1P25270 412 aa5.59□□□□□ -1.51
REB1YBR049C EPS1P40557 701 aa5.58□□□□□ -1.52
REB1YBR049C RTG3P38165 486 aa5.56□□□□□ -1.52
REB1YBR049C RCR1P38212 213 aa5.56□□□□□ -1.52
REB1YBR049C MAK11P20484 414 aaKnown RBP5.55□□□□□ -1.52
REB1YBR049C BDF1P35817 686 aa5.53□□□□□ -1.52
REB1YBR049C DSF2P38213 736 aa5.53□□□□□ -1.52
REB1YBR049C RLF2Q12495 606 aa5.53□□□□□ -1.52
REB1YBR049C PBS2P08018 668 aa5.51□□□□□ -1.53
REB1YBR049C YFR006WP43590 535 aa5.5□□□□□ -1.53
REB1YBR049C YNR021WP53723 404 aaKnown RBP5.48□□□□□ -1.53
REB1YBR049C ABP1P15891 592 aaKnown RBP5.47□□□□□ -1.53
REB1YBR049C YCK3P39962 524 aa5.47□□□□□ -1.53
REB1YBR049C KIN1P13185 1064 aa5.46□□□□□ -1.53
REB1YBR049C COQ8P27697 501 aa5.46□□□□□ -1.53
REB1YBR049C SCY1P53009 804 aa5.46□□□□□ -1.54
REB1YBR049C NOP53Q12080 455 aaKnown RBP5.46□□□□□ -1.54
REB1YBR049C VPS29P38759 282 aa5.45□□□□□ -1.54
REB1YBR049C HGH1P48362 394 aaKnown RBP5.44□□□□□ -1.54
REB1YBR049C URN1Q06525 465 aaKnown RBP5.44□□□□□ -1.54
REB1YBR049C MAM3Q12296 706 aa5.44□□□□□ -1.54
REB1YBR049C AIM7Q12156 149 aa5.43□□□□□ -1.54
REB1YBR049C REF2P42073 533 aaPredicted RBP5.42□□□□□ -1.54
REB1YBR049C GLC3P32775 704 aa5.4□□□□□ -1.54
REB1YBR049C IES2P40154 320 aa5.4□□□□□ -1.55
REB1YBR049C UBP10P53874 792 aaPredicted RBP5.4□□□□□ -1.55
REB1YBR049C YMR1P47147 688 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
REB1YBR049C MAP2P38174 421 aaKnown RBP5.38□□□□□ -1.55
REB1YBR049C NUP42P49686 430 aaKnown RBP5.38□□□□□ -1.55
REB1YBR049C MAK21Q12176 1025 aaKnown RBP5.37□□□□□ -1.55
REB1YBR049C DIT2P21595 489 aa5.37□□□□□ -1.55
REB1YBR049C EDS1P38073 919 aa5.36□□□□□ -1.55
REB1YBR049C STS1P38637 319 aa5.35□□□□□ -1.55
REB1YBR049C COX6P00427 148 aa5.35□□□□□ -1.55
REB1YBR049C SLX5P32828 619 aaKnown RBP5.34□□□□□ -1.55
REB1YBR049C GUA1P38625 525 aaKnown RBP5.34□□□□□ -1.56
REB1YBR049C ATF2P53296 535 aa5.34□□□□□ -1.56
REB1YBR049C DBP1P24784 617 aaKnown RBP5.33□□□□□ -1.56
REB1YBR049C SPA2P23201 1466 aaKnown RBP5.32□□□□□ -1.56
REB1YBR049C PTC3P34221 468 aaKnown RBP5.31□□□□□ -1.56
REB1YBR049C HPC2Q01448 625 aa5.31□□□□□ -1.56
REB1YBR049C YOR238WQ08634 303 aa5.29□□□□□ -1.56
REB1YBR049C YGL015CP33199 130 aa5.27□□□□□ -1.57
REB1YBR049C TFB3Q03290 321 aa5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms