Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 AIRN-201ENST00000601203 4374 ntBASIC18.3■□□□□ 0.52
CDH20Q9HBT6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 AC138907.5-202ENST00000569484 235 ntBASIC18.3■□□□□ 0.52
CDH20Q9HBT6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 LINC00565-201ENST00000562710 2331 ntBASIC18.3■□□□□ 0.52
CDH20Q9HBT6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH20Q9HBT6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 AP001160.3-201ENST00000601484 763 ntBASIC18.29■□□□□ 0.52
CDH20Q9HBT6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH20Q9HBT6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 AC120498.10-201ENST00000621827 505 ntBASIC18.28■□□□□ 0.52
CDH20Q9HBT6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 AC244015.2-201ENST00000616358 1861 ntBASIC18.28■□□□□ 0.52
CDH20Q9HBT6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDH20Q9HBT6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 AC010141.2-201ENST00000452426 721 ntBASIC18.27■□□□□ 0.52
CDH20Q9HBT6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH20Q9HBT6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDH20Q9HBT6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDH20Q9HBT6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CDH20Q9HBT6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 POU5F1P4-201ENST00000413175 1085 ntBASIC18.26■□□□□ 0.51
CDH20Q9HBT6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 AC137761.2-201ENST00000561729 223 ntBASIC18.26■□□□□ 0.51
CDH20Q9HBT6 AC145350.3-201ENST00000569033 163 ntBASIC18.26■□□□□ 0.51
CDH20Q9HBT6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDH20Q9HBT6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 933.8 ms