Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.32■□□□□ 0.52
UPK1BO75841 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1BO75841 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1BO75841 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1BO75841 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1BO75841 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.32■□□□□ 0.52
UPK1BO75841 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1BO75841 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1BO75841 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.32■□□□□ 0.52
UPK1BO75841 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.32■□□□□ 0.52
UPK1BO75841 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1BO75841 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1BO75841 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPK1BO75841 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
UPK1BO75841 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
UPK1BO75841 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
UPK1BO75841 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1BO75841 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
UPK1BO75841 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1BO75841 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1BO75841 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.31■□□□□ 0.52
UPK1BO75841 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.31■□□□□ 0.52
UPK1BO75841 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1BO75841 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
UPK1BO75841 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1BO75841 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
UPK1BO75841 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
UPK1BO75841 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1BO75841 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.31■□□□□ 0.52
UPK1BO75841 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1BO75841 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1BO75841 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
UPK1BO75841 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1BO75841 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPK1BO75841 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.3■□□□□ 0.52
UPK1BO75841 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1BO75841 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1BO75841 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
UPK1BO75841 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1BO75841 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
UPK1BO75841 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.3■□□□□ 0.52
UPK1BO75841 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1BO75841 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1BO75841 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1BO75841 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1BO75841 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1BO75841 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1BO75841 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPK1BO75841 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1BO75841 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1BO75841 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
UPK1BO75841 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.29■□□□□ 0.52
UPK1BO75841 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
UPK1BO75841 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1BO75841 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UPK1BO75841 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1BO75841 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
UPK1BO75841 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
UPK1BO75841 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1BO75841 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1BO75841 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1BO75841 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
UPK1BO75841 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1BO75841 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
UPK1BO75841 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1BO75841 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UPK1BO75841 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.28■□□□□ 0.52
UPK1BO75841 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
UPK1BO75841 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
UPK1BO75841 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.28■□□□□ 0.52
UPK1BO75841 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.28■□□□□ 0.52
UPK1BO75841 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.28■□□□□ 0.52
UPK1BO75841 AC004448.1-201ENST00000458332 883 ntBASIC18.28■□□□□ 0.52
UPK1BO75841 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.28■□□□□ 0.52
UPK1BO75841 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
UPK1BO75841 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.28■□□□□ 0.52
UPK1BO75841 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UPK1BO75841 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UPK1BO75841 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UPK1BO75841 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
UPK1BO75841 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1BO75841 AC004687.1-201ENST00000579003 1625 ntBASIC18.27■□□□□ 0.52
UPK1BO75841 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
UPK1BO75841 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1BO75841 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1BO75841 CR559946.2-201ENST00000623684 991 ntBASIC18.27■□□□□ 0.52
UPK1BO75841 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UPK1BO75841 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.27■□□□□ 0.52
UPK1BO75841 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms