RNA–Protein interactions for RNA: ENST00000563475.1

SNAI3-AS1-202, SNAI3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene SNAI3-AS1, Length 2,081 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3-AS1-202ENST00000563475 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
SNAI3-AS1-202ENST00000563475 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
SNAI3-AS1-202ENST00000563475 HRCP23327 699 aa31.01■■■□□ 2.55
SNAI3-AS1-202ENST00000563475 ABCC9O60706 1549 aa30.78■■■□□ 2.52
SNAI3-AS1-202ENST00000563475 SHROOM4Q9ULL8 1493 aa30.54■■■□□ 2.48
SNAI3-AS1-202ENST00000563475 SUPT5HO00267 1087 aaKnown RBP30.41■■■□□ 2.46
SNAI3-AS1-202ENST00000563475 MYO15BQ96JP2 1530 aa30.37■■■□□ 2.45
SNAI3-AS1-202ENST00000563475 ZCCHC6Q5VYS8 1495 aaKnown RBP30.28■■■□□ 2.44
SNAI3-AS1-202ENST00000563475 CHIC1Q5VXU3 224 aa30.23■■■□□ 2.43
SNAI3-AS1-202ENST00000563475 DCAF1Q9Y4B6 1507 aa30.14■■■□□ 2.42
SNAI3-AS1-202ENST00000563475 PCGF6Q9BYE7 350 aa30.11■■■□□ 2.41
SNAI3-AS1-202ENST00000563475 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
SNAI3-AS1-202ENST00000563475 PELP1Q8IZL8 1130 aaKnown RBP30.03■■■□□ 2.4
SNAI3-AS1-202ENST00000563475 PPARGC1BQ86YN6 1023 aaKnown RBP29.89■■■□□ 2.37
SNAI3-AS1-202ENST00000563475 NACADO15069 1562 aa29.7■■■□□ 2.35
SNAI3-AS1-202ENST00000563475 RB1CC1Q8TDY2 1594 aa29.68■■■□□ 2.34
SNAI3-AS1-202ENST00000563475 TRIM26Q12899 539 aaPredicted RBP29.54■■■□□ 2.32
SNAI3-AS1-202ENST00000563475 ZEB1P37275 1124 aaPredicted RBP29.48■■■□□ 2.31
SNAI3-AS1-202ENST00000563475 LOC105371045A0A1W2PR82 267 aa29.18■■■□□ 2.26
SNAI3-AS1-202ENST00000563475 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
SNAI3-AS1-202ENST00000563475 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
SNAI3-AS1-202ENST00000563475 SCAF1Q9H7N4 1312 aaKnown RBP29.06■■■□□ 2.24
SNAI3-AS1-202ENST00000563475 MYT1Q01538 1121 aa28.97■■■□□ 2.23
SNAI3-AS1-202ENST00000563475 PABPN1Q86U42 306 aaKnown RBP eCLIP28.87■■■□□ 2.215e-8■■□□□ 11.5
SNAI3-AS1-202ENST00000563475 BICRAQ9NZM4 1560 aa28.78■■■□□ 2.2
SNAI3-AS1-202ENST00000563475 ACIN1Q9UKV3 1341 aaKnown RBP28.55■■■□□ 2.16
SNAI3-AS1-202ENST00000563475 TRIM41Q8WV44 630 aa28.39■■■□□ 2.14
SNAI3-AS1-202ENST00000563475 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.14
SNAI3-AS1-202ENST00000563475 CENPBP07199 599 aaPredicted RBP28.3■■■□□ 2.12
SNAI3-AS1-202ENST00000563475 NEUROD1Q13562 356 aa28.3■■■□□ 2.12
SNAI3-AS1-202ENST00000563475 GTF3C3Q9Y5Q9 886 aa28.13■■■□□ 2.09
SNAI3-AS1-202ENST00000563475 DIEXFQ68CQ4 756 aaKnown RBP28.06■■■□□ 2.08
SNAI3-AS1-202ENST00000563475 CCER1Q8TC90 406 aaPredicted RBP28.02■■■□□ 2.08
SNAI3-AS1-202ENST00000563475 EIF4G1Q04637 1599 aaKnown RBP28■■■□□ 2.07
SNAI3-AS1-202ENST00000563475 FAM9AQ8IZU1 332 aaPredicted RBP27.98■■■□□ 2.07
SNAI3-AS1-202ENST00000563475 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
SNAI3-AS1-202ENST00000563475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.93■■■□□ 2.06
SNAI3-AS1-202ENST00000563475 DNAJC5BQ9UF47 199 aa27.91■■■□□ 2.06
SNAI3-AS1-202ENST00000563475 WRNQ14191 1432 aaPredicted RBP eCLIP27.88■■■□□ 2.056e-7■■■■■ 33.4
SNAI3-AS1-202ENST00000563475 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
SNAI3-AS1-202ENST00000563475 BAZ1AQ9NRL2 1556 aaPredicted RBP27.78■■■□□ 2.04
SNAI3-AS1-202ENST00000563475 SMARCA4P51532 1647 aa27.77■■■□□ 2.04
SNAI3-AS1-202ENST00000563475 MROH2BQ7Z745 1585 aa27.71■■■□□ 2.03
SNAI3-AS1-202ENST00000563475 ZNF316A6NFI3 1004 aaPredicted RBP27.67■■■□□ 2.02
SNAI3-AS1-202ENST00000563475 EHMT2Q96KQ7 1210 aa27.53■■■□□ 2
SNAI3-AS1-202ENST00000563475 ATAD2BQ9ULI0 1458 aa27.52■■■□□ 2
SNAI3-AS1-202ENST00000563475 WIZO95785 1651 aa27.49■■□□□ 1.99
SNAI3-AS1-202ENST00000563475 SMARCA2P51531 1590 aa27.49■■□□□ 1.99
SNAI3-AS1-202ENST00000563475 CEP162Q5TB80 1403 aa27.46■■□□□ 1.99
SNAI3-AS1-202ENST00000563475 CLSPNQ9HAW4 1339 aa27.45■■□□□ 1.98
SNAI3-AS1-202ENST00000563475 TNIKQ9UKE5 1360 aa27.43■■□□□ 1.98
SNAI3-AS1-202ENST00000563475 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
SNAI3-AS1-202ENST00000563475 NCAPD3P42695 1498 aa27.41■■□□□ 1.98
SNAI3-AS1-202ENST00000563475 EEA1Q15075 1411 aa27.37■■□□□ 1.97
SNAI3-AS1-202ENST00000563475 BAZ1BQ9UIG0 1483 aaKnown RBP27.34■■□□□ 1.97
SNAI3-AS1-202ENST00000563475 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
SNAI3-AS1-202ENST00000563475 MIER1Q8N108 512 aa27.26■■□□□ 1.95
SNAI3-AS1-202ENST00000563475 YTHDC1Q96MU7 727 aaKnown RBP27.23■■□□□ 1.95
SNAI3-AS1-202ENST00000563475 TTBK1Q5TCY1 1321 aaPredicted RBP27.21■■□□□ 1.95
SNAI3-AS1-202ENST00000563475 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.94
SNAI3-AS1-202ENST00000563475 TOP2AP11388 1531 aaKnown RBP27.19■■□□□ 1.94
SNAI3-AS1-202ENST00000563475 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
SNAI3-AS1-202ENST00000563475 GOLGA3Q08378 1498 aa27.11■■□□□ 1.93
SNAI3-AS1-202ENST00000563475 SOGA1O94964 1423 aa27.04■■□□□ 1.92
SNAI3-AS1-202ENST00000563475 CSRNP3Q8WYN3 585 aa27.01■■□□□ 1.91
SNAI3-AS1-202ENST00000563475 KIF21BO75037 1637 aa26.95■■□□□ 1.9
SNAI3-AS1-202ENST00000563475 SUPT16HQ9Y5B9 1047 aaKnown RBP26.94■■□□□ 1.9
SNAI3-AS1-202ENST00000563475 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
SNAI3-AS1-202ENST00000563475 ANP32EQ9BTT0 268 aa26.86■■□□□ 1.89
SNAI3-AS1-202ENST00000563475 UBTFP17480 764 aaKnown RBP26.86■■□□□ 1.89
SNAI3-AS1-202ENST00000563475 VPS8Q8N3P4 1428 aa26.83■■□□□ 1.89
SNAI3-AS1-202ENST00000563475 RUSC2Q8N2Y8 1516 aa26.83■■□□□ 1.89
SNAI3-AS1-202ENST00000563475 TSHZ2Q9NRE2 1034 aa26.77■■□□□ 1.88
SNAI3-AS1-202ENST00000563475 HNRNPUL2Q1KMD3 747 aaKnown RBP26.77■■□□□ 1.88
SNAI3-AS1-202ENST00000563475 NESP48681 1621 aa26.75■■□□□ 1.87
SNAI3-AS1-202ENST00000563475 CLIP1P30622 1438 aa26.75■■□□□ 1.87
SNAI3-AS1-202ENST00000563475 CADPSQ9ULU8 1353 aa26.67■■□□□ 1.86
SNAI3-AS1-202ENST00000563475 DHX57Q6P158 1386 aaKnown RBP26.64■■□□□ 1.86
SNAI3-AS1-202ENST00000563475 LAMC3Q9Y6N6 1575 aa26.64■■□□□ 1.86
SNAI3-AS1-202ENST00000563475 CFTRP13569 1480 aa26.58■■□□□ 1.85
SNAI3-AS1-202ENST00000563475 APLP2Q06481 763 aa26.57■■□□□ 1.84
SNAI3-AS1-202ENST00000563475 BCL11AQ9H165 835 aa26.56■■□□□ 1.84
SNAI3-AS1-202ENST00000563475 CUX2O14529 1486 aa26.52■■□□□ 1.84
SNAI3-AS1-202ENST00000563475 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
SNAI3-AS1-202ENST00000563475 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
SNAI3-AS1-202ENST00000563475 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
SNAI3-AS1-202ENST00000563475 KIF21AQ7Z4S6 1674 aa26.42■■□□□ 1.82
SNAI3-AS1-202ENST00000563475 RRBP1Q9P2E9 1410 aaKnown RBP26.4■■□□□ 1.82
SNAI3-AS1-202ENST00000563475 PRDM2Q13029 1718 aa26.4■■□□□ 1.82
SNAI3-AS1-202ENST00000563475 RAPGEF2Q9Y4G8 1499 aa26.39■■□□□ 1.82
SNAI3-AS1-202ENST00000563475 FANCD2Q9BXW9 1451 aa26.39■■□□□ 1.81
SNAI3-AS1-202ENST00000563475 ERICH3Q5RHP9 1530 aa26.35■■□□□ 1.81
SNAI3-AS1-202ENST00000563475 ARAP1Q96P48 1450 aa26.24■■□□□ 1.79
SNAI3-AS1-202ENST00000563475 TOP2BQ02880 1626 aa26.2■■□□□ 1.79
SNAI3-AS1-202ENST00000563475 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
SNAI3-AS1-202ENST00000563475 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
SNAI3-AS1-202ENST00000563475 BIVM-ERCC5R4GMW8 1640 aa26.15■■□□□ 1.78
SNAI3-AS1-202ENST00000563475 PRXQ9BXM0 1461 aa26.15■■□□□ 1.78
SNAI3-AS1-202ENST00000563475 RBM19Q9Y4C8 960 aaKnown RBP26.15■■□□□ 1.78
SNAI3-AS1-202ENST00000563475 FKBP8Q14318 412 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms