Protein–RNA interactions for Protein: Q9HCB6

SPON1, Spondin-1, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPON1Q9HCB6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
SPON1Q9HCB6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC34.75■■■■□ 3.15
SPON1Q9HCB6 MIR6090-201ENST00000622481 60 ntBASIC34.74■■■■□ 3.15
SPON1Q9HCB6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
SPON1Q9HCB6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
SPON1Q9HCB6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
SPON1Q9HCB6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
SPON1Q9HCB6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
SPON1Q9HCB6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
SPON1Q9HCB6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC34.69■■■■□ 3.14
SPON1Q9HCB6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC34.69■■■■□ 3.14
SPON1Q9HCB6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
SPON1Q9HCB6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC34.66■■■■□ 3.14
SPON1Q9HCB6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC34.66■■■■□ 3.14
SPON1Q9HCB6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SPON1Q9HCB6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.65■■■■□ 3.14
SPON1Q9HCB6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC34.64■■■■□ 3.14
SPON1Q9HCB6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC34.63■■■■□ 3.13
SPON1Q9HCB6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC34.62■■■■□ 3.13
SPON1Q9HCB6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC34.62■■■■□ 3.13
SPON1Q9HCB6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
SPON1Q9HCB6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC34.6■■■■□ 3.13
SPON1Q9HCB6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC34.6■■■■□ 3.13
SPON1Q9HCB6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
SPON1Q9HCB6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
SPON1Q9HCB6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC34.58■■■■□ 3.13
SPON1Q9HCB6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SPON1Q9HCB6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC34.58■■■■□ 3.13
SPON1Q9HCB6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.57■■■■□ 3.13
SPON1Q9HCB6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC34.57■■■■□ 3.12
SPON1Q9HCB6 AC012354.3-201ENST00000623734 483 ntBASIC34.57■■■■□ 3.12
SPON1Q9HCB6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC34.56■■■■□ 3.12
SPON1Q9HCB6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC34.56■■■■□ 3.12
SPON1Q9HCB6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
SPON1Q9HCB6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
SPON1Q9HCB6 RNF126P1-201ENST00000567452 1320 ntBASIC34.55■■■■□ 3.12
SPON1Q9HCB6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC34.54■■■■□ 3.12
SPON1Q9HCB6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 GPX1-201ENST00000419349 1106 ntBASIC34.53■■■■□ 3.12
SPON1Q9HCB6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
SPON1Q9HCB6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC34.52■■■■□ 3.12
SPON1Q9HCB6 DUX4L13-201ENST00000554103 1267 ntBASIC34.5■■■■□ 3.11
SPON1Q9HCB6 DUX4L15-201ENST00000611059 1267 ntBASIC34.5■■■■□ 3.11
SPON1Q9HCB6 DUX4L23-201ENST00000615195 1269 ntBASIC34.5■■■■□ 3.11
SPON1Q9HCB6 DUX4L24-201ENST00000617576 1269 ntBASIC34.5■■■■□ 3.11
SPON1Q9HCB6 DUX4L22-201ENST00000618238 1269 ntBASIC34.5■■■■□ 3.11
SPON1Q9HCB6 DUX4L20-201ENST00000619712 1269 ntBASIC34.5■■■■□ 3.11
SPON1Q9HCB6 DUX4L21-201ENST00000622058 1269 ntBASIC34.5■■■■□ 3.11
SPON1Q9HCB6 DUX4L10-201ENST00000622460 1267 ntBASIC34.5■■■■□ 3.11
SPON1Q9HCB6 DUX4L25-201ENST00000624915 1269 ntBASIC34.5■■■■□ 3.11
SPON1Q9HCB6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
SPON1Q9HCB6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
SPON1Q9HCB6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
SPON1Q9HCB6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SPON1Q9HCB6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
SPON1Q9HCB6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC34.47■■■■□ 3.11
SPON1Q9HCB6 HES6-205ENST00000409356 528 ntTSL 2 BASIC34.46■■■■□ 3.11
SPON1Q9HCB6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC34.46■■■■□ 3.11
SPON1Q9HCB6 NTF6A-201ENST00000591175 560 ntBASIC34.46■■■■□ 3.11
SPON1Q9HCB6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
SPON1Q9HCB6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
SPON1Q9HCB6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC34.43■■■■□ 3.1
SPON1Q9HCB6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
SPON1Q9HCB6 AC018358.1-201ENST00000631079 1402 ntBASIC34.41■■■■□ 3.1
SPON1Q9HCB6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
SPON1Q9HCB6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
SPON1Q9HCB6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
SPON1Q9HCB6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
SPON1Q9HCB6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC34.38■■■■□ 3.09
SPON1Q9HCB6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
SPON1Q9HCB6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
SPON1Q9HCB6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
SPON1Q9HCB6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC34.34■■■■□ 3.09
SPON1Q9HCB6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SPON1Q9HCB6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
SPON1Q9HCB6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC34.33■■■■□ 3.09
SPON1Q9HCB6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
SPON1Q9HCB6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SPON1Q9HCB6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
SPON1Q9HCB6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
SPON1Q9HCB6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC34.29■■■■□ 3.08
SPON1Q9HCB6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC34.29■■■■□ 3.08
SPON1Q9HCB6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC34.28■■■■□ 3.08
SPON1Q9HCB6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
SPON1Q9HCB6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
SPON1Q9HCB6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
SPON1Q9HCB6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC34.26■■■■□ 3.08
SPON1Q9HCB6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
SPON1Q9HCB6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC34.26■■■■□ 3.08
SPON1Q9HCB6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
SPON1Q9HCB6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC34.25■■■■□ 3.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms