Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NAF1Q96HR8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.58■■□□□ 1.85
NAF1Q96HR8 MIR3665-201ENST00000578708 105 ntBASIC26.57■■□□□ 1.84
NAF1Q96HR8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NAF1Q96HR8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
NAF1Q96HR8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
NAF1Q96HR8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NAF1Q96HR8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.54■■□□□ 1.84
NAF1Q96HR8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.53■■□□□ 1.84
NAF1Q96HR8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NAF1Q96HR8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NAF1Q96HR8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
NAF1Q96HR8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
NAF1Q96HR8 HLA-V-202ENST00000446817 847 ntBASIC26.51■■□□□ 1.83
NAF1Q96HR8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.51■■□□□ 1.83
NAF1Q96HR8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.5■■□□□ 1.83
NAF1Q96HR8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NAF1Q96HR8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.5■■□□□ 1.83
NAF1Q96HR8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.5■■□□□ 1.83
NAF1Q96HR8 AC087741.3-201ENST00000624270 1347 ntBASIC26.49■■□□□ 1.83
NAF1Q96HR8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NAF1Q96HR8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NAF1Q96HR8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NAF1Q96HR8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
NAF1Q96HR8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NAF1Q96HR8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
NAF1Q96HR8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.46■■□□□ 1.83
NAF1Q96HR8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.46■■□□□ 1.83
NAF1Q96HR8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.83
NAF1Q96HR8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
NAF1Q96HR8 DUX4L28-201ENST00000623687 678 ntBASIC26.45■■□□□ 1.82
NAF1Q96HR8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
NAF1Q96HR8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
NAF1Q96HR8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NAF1Q96HR8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
NAF1Q96HR8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NAF1Q96HR8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.42■■□□□ 1.82
NAF1Q96HR8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NAF1Q96HR8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.4■■□□□ 1.82
NAF1Q96HR8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
NAF1Q96HR8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.4■■□□□ 1.82
NAF1Q96HR8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NAF1Q96HR8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NAF1Q96HR8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NAF1Q96HR8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
NAF1Q96HR8 AC044849.2-201ENST00000606596 710 ntBASIC26.39■■□□□ 1.82
NAF1Q96HR8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.38■■□□□ 1.81
NAF1Q96HR8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NAF1Q96HR8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NAF1Q96HR8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NAF1Q96HR8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
NAF1Q96HR8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NAF1Q96HR8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NAF1Q96HR8 MIR762-201ENST00000390236 83 ntBASIC26.35■■□□□ 1.81
NAF1Q96HR8 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.35■■□□□ 1.81
NAF1Q96HR8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NAF1Q96HR8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
NAF1Q96HR8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
NAF1Q96HR8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NAF1Q96HR8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NAF1Q96HR8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.33■■□□□ 1.81
NAF1Q96HR8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NAF1Q96HR8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.33■■□□□ 1.81
NAF1Q96HR8 AC005559.1-201ENST00000589661 871 ntBASIC26.32■■□□□ 1.8
NAF1Q96HR8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NAF1Q96HR8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NAF1Q96HR8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.3■■□□□ 1.8
NAF1Q96HR8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NAF1Q96HR8 AC135731.1-201ENST00000569415 2548 ntBASIC26.3■■□□□ 1.8
NAF1Q96HR8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NAF1Q96HR8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NAF1Q96HR8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NAF1Q96HR8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NAF1Q96HR8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NAF1Q96HR8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NAF1Q96HR8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.29■■□□□ 1.8
NAF1Q96HR8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.28■■□□□ 1.8
NAF1Q96HR8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NAF1Q96HR8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NAF1Q96HR8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NAF1Q96HR8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
NAF1Q96HR8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NAF1Q96HR8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.25■■□□□ 1.79
NAF1Q96HR8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.25■■□□□ 1.79
NAF1Q96HR8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
NAF1Q96HR8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NAF1Q96HR8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NAF1Q96HR8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NAF1Q96HR8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.22■■□□□ 1.79
NAF1Q96HR8 ZNRF2P2-203ENST00000454624 420 ntBASIC26.22■■□□□ 1.79
NAF1Q96HR8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.22■■□□□ 1.79
NAF1Q96HR8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.22■■□□□ 1.79
NAF1Q96HR8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.21■■□□□ 1.79
NAF1Q96HR8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NAF1Q96HR8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
NAF1Q96HR8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.2■■□□□ 1.78
NAF1Q96HR8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NAF1Q96HR8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NAF1Q96HR8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
NAF1Q96HR8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms