Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
DDX11Q96FC9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
DDX11Q96FC9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.56■■■□□ 2.64
DDX11Q96FC9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.55■■■□□ 2.64
DDX11Q96FC9 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.55■■■□□ 2.64
DDX11Q96FC9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
DDX11Q96FC9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
DDX11Q96FC9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
DDX11Q96FC9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.53■■■□□ 2.64
DDX11Q96FC9 MIR762-201ENST00000390236 83 ntBASIC31.53■■■□□ 2.64
DDX11Q96FC9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
DDX11Q96FC9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.53■■■□□ 2.64
DDX11Q96FC9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
DDX11Q96FC9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.51■■■□□ 2.63
DDX11Q96FC9 ABCB10P1-201ENST00000614297 2181 ntBASIC31.51■■■□□ 2.63
DDX11Q96FC9 AL161658.1-201ENST00000623641 1967 ntBASIC31.49■■■□□ 2.63
DDX11Q96FC9 DUX4L28-201ENST00000623687 678 ntBASIC31.49■■■□□ 2.63
DDX11Q96FC9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
DDX11Q96FC9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
DDX11Q96FC9 AC087741.3-201ENST00000624270 1347 ntBASIC31.47■■■□□ 2.63
DDX11Q96FC9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.46■■■□□ 2.63
DDX11Q96FC9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
DDX11Q96FC9 AC005559.1-201ENST00000589661 871 ntBASIC31.45■■■□□ 2.63
DDX11Q96FC9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
DDX11Q96FC9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
DDX11Q96FC9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.44■■■□□ 2.62
DDX11Q96FC9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
DDX11Q96FC9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.44■■■□□ 2.62
DDX11Q96FC9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
DDX11Q96FC9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.43■■■□□ 2.62
DDX11Q96FC9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.41■■■□□ 2.62
DDX11Q96FC9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
DDX11Q96FC9 WASH5P-204ENST00000632292 975 ntBASIC31.39■■■□□ 2.62
DDX11Q96FC9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
DDX11Q96FC9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
DDX11Q96FC9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.37■■■□□ 2.61
DDX11Q96FC9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.37■■■□□ 2.61
DDX11Q96FC9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
DDX11Q96FC9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.37■■■□□ 2.61
DDX11Q96FC9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
DDX11Q96FC9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.36■■■□□ 2.61
DDX11Q96FC9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
DDX11Q96FC9 AC044849.2-201ENST00000606596 710 ntBASIC31.35■■■□□ 2.61
DDX11Q96FC9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
DDX11Q96FC9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
DDX11Q96FC9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
DDX11Q96FC9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
DDX11Q96FC9 ABHD17AP4-201ENST00000411545 909 ntBASIC31.32■■■□□ 2.6
DDX11Q96FC9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
DDX11Q96FC9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
DDX11Q96FC9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
DDX11Q96FC9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DDX11Q96FC9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
DDX11Q96FC9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.29■■■□□ 2.6
DDX11Q96FC9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
DDX11Q96FC9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
DDX11Q96FC9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
DDX11Q96FC9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
DDX11Q96FC9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
DDX11Q96FC9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
DDX11Q96FC9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
DDX11Q96FC9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
DDX11Q96FC9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.27■■■□□ 2.6
DDX11Q96FC9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.27■■■□□ 2.6
DDX11Q96FC9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
DDX11Q96FC9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
DDX11Q96FC9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
DDX11Q96FC9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
DDX11Q96FC9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
DDX11Q96FC9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX11Q96FC9 MIR7108-201ENST00000614319 87 ntBASIC31.24■■■□□ 2.59
DDX11Q96FC9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX11Q96FC9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
DDX11Q96FC9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
DDX11Q96FC9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
DDX11Q96FC9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
DDX11Q96FC9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
DDX11Q96FC9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
DDX11Q96FC9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
DDX11Q96FC9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
DDX11Q96FC9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.18■■■□□ 2.58
DDX11Q96FC9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.18■■■□□ 2.58
DDX11Q96FC9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
DDX11Q96FC9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
DDX11Q96FC9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
DDX11Q96FC9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
DDX11Q96FC9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.16■■■□□ 2.58
DDX11Q96FC9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
DDX11Q96FC9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
DDX11Q96FC9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
DDX11Q96FC9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.14■■■□□ 2.58
DDX11Q96FC9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.14■■■□□ 2.57
DDX11Q96FC9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.13■■■□□ 2.57
DDX11Q96FC9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
DDX11Q96FC9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
DDX11Q96FC9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DDX11Q96FC9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DDX11Q96FC9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DDX11Q96FC9 ST7-AS1-201ENST00000456775 1889 ntBASIC31.12■■■□□ 2.57
DDX11Q96FC9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms