Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
RAPGEF4Q8WZA2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
RAPGEF4Q8WZA2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC35.67■■■■□ 3.3
RAPGEF4Q8WZA2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
RAPGEF4Q8WZA2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC35.66■■■■□ 3.3
RAPGEF4Q8WZA2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC35.66■■■■□ 3.3
RAPGEF4Q8WZA2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
RAPGEF4Q8WZA2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC35.65■■■■□ 3.3
RAPGEF4Q8WZA2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
RAPGEF4Q8WZA2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC35.64■■■■□ 3.3
RAPGEF4Q8WZA2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC35.64■■■■□ 3.3
RAPGEF4Q8WZA2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
RAPGEF4Q8WZA2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
RAPGEF4Q8WZA2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC35.63■■■■□ 3.29
RAPGEF4Q8WZA2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
RAPGEF4Q8WZA2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
RAPGEF4Q8WZA2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
RAPGEF4Q8WZA2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC35.62■■■■□ 3.29
RAPGEF4Q8WZA2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC35.61■■■■□ 3.29
RAPGEF4Q8WZA2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC35.6■■■■□ 3.29
RAPGEF4Q8WZA2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC35.6■■■■□ 3.29
RAPGEF4Q8WZA2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC35.6■■■■□ 3.29
RAPGEF4Q8WZA2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC35.59■■■■□ 3.29
RAPGEF4Q8WZA2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
RAPGEF4Q8WZA2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC35.59■■■■□ 3.29
RAPGEF4Q8WZA2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
RAPGEF4Q8WZA2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
RAPGEF4Q8WZA2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
RAPGEF4Q8WZA2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC35.55■■■■□ 3.28
RAPGEF4Q8WZA2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC35.54■■■■□ 3.28
RAPGEF4Q8WZA2 MIR4449-201ENST00000578365 66 ntBASIC35.54■■■■□ 3.28
RAPGEF4Q8WZA2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
RAPGEF4Q8WZA2 MIR639-201ENST00000384974 98 ntBASIC35.53■■■■□ 3.28
RAPGEF4Q8WZA2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
RAPGEF4Q8WZA2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC35.52■■■■□ 3.28
RAPGEF4Q8WZA2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
RAPGEF4Q8WZA2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC35.51■■■■□ 3.28
RAPGEF4Q8WZA2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC35.51■■■■□ 3.28
RAPGEF4Q8WZA2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
RAPGEF4Q8WZA2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC35.48■■■■□ 3.27
RAPGEF4Q8WZA2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC35.47■■■■□ 3.27
RAPGEF4Q8WZA2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
RAPGEF4Q8WZA2 MIR3648-2-201ENST00000581792 180 ntBASIC35.46■■■■□ 3.27
RAPGEF4Q8WZA2 MIR3648-1-201ENST00000615959 180 ntBASIC35.46■■■■□ 3.27
RAPGEF4Q8WZA2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
RAPGEF4Q8WZA2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
RAPGEF4Q8WZA2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
RAPGEF4Q8WZA2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC35.45■■■■□ 3.27
RAPGEF4Q8WZA2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
RAPGEF4Q8WZA2 AC016575.1-201ENST00000607026 382 ntBASIC35.44■■■■□ 3.26
RAPGEF4Q8WZA2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC35.44■■■■□ 3.26
RAPGEF4Q8WZA2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC35.44■■■■□ 3.26
RAPGEF4Q8WZA2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
RAPGEF4Q8WZA2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
RAPGEF4Q8WZA2 LINC01971-201ENST00000617888 1048 ntBASIC35.42■■■■□ 3.26
RAPGEF4Q8WZA2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
RAPGEF4Q8WZA2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC35.41■■■■□ 3.26
RAPGEF4Q8WZA2 DUX4L11-201ENST00000611504 1267 ntBASIC35.41■■■■□ 3.26
RAPGEF4Q8WZA2 DUX4L12-201ENST00000614593 1267 ntBASIC35.41■■■■□ 3.26
RAPGEF4Q8WZA2 DUX4L14-201ENST00000621227 1267 ntBASIC35.41■■■■□ 3.26
RAPGEF4Q8WZA2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
RAPGEF4Q8WZA2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
RAPGEF4Q8WZA2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
RAPGEF4Q8WZA2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC35.38■■■■□ 3.25
RAPGEF4Q8WZA2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
RAPGEF4Q8WZA2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC35.37■■■■□ 3.25
RAPGEF4Q8WZA2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC35.35■■■■□ 3.25
RAPGEF4Q8WZA2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC35.35■■■■□ 3.25
RAPGEF4Q8WZA2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC35.35■■■■□ 3.25
RAPGEF4Q8WZA2 CR559946.2-201ENST00000623684 991 ntBASIC35.34■■■■□ 3.25
RAPGEF4Q8WZA2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC35.33■■■■□ 3.25
RAPGEF4Q8WZA2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC35.33■■■■□ 3.25
RAPGEF4Q8WZA2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC35.32■■■■□ 3.25
RAPGEF4Q8WZA2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
RAPGEF4Q8WZA2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC35.3■■■■□ 3.24
RAPGEF4Q8WZA2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC35.3■■■■□ 3.24
RAPGEF4Q8WZA2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
RAPGEF4Q8WZA2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
RAPGEF4Q8WZA2 AC120057.4-201ENST00000624722 1615 ntBASIC35.28■■■■□ 3.24
RAPGEF4Q8WZA2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC35.28■■■■□ 3.24
RAPGEF4Q8WZA2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC35.27■■■■□ 3.24
RAPGEF4Q8WZA2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
RAPGEF4Q8WZA2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC35.26■■■■□ 3.24
RAPGEF4Q8WZA2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC35.26■■■■□ 3.23
RAPGEF4Q8WZA2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
RAPGEF4Q8WZA2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC35.24■■■■□ 3.23
RAPGEF4Q8WZA2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC35.23■■■■□ 3.23
RAPGEF4Q8WZA2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
RAPGEF4Q8WZA2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
RAPGEF4Q8WZA2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC35.22■■■■□ 3.23
RAPGEF4Q8WZA2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
RAPGEF4Q8WZA2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
RAPGEF4Q8WZA2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC35.21■■■■□ 3.23
RAPGEF4Q8WZA2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
RAPGEF4Q8WZA2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
RAPGEF4Q8WZA2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
RAPGEF4Q8WZA2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC35.17■■■■□ 3.22
RAPGEF4Q8WZA2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC35.16■■■■□ 3.22
RAPGEF4Q8WZA2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC35.16■■■■□ 3.22
RAPGEF4Q8WZA2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC35.16■■■■□ 3.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms