Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.84■■□□□ 1.73
COL27A1Q8IZC6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
COL27A1Q8IZC6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
COL27A1Q8IZC6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.83■■□□□ 1.73
COL27A1Q8IZC6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
COL27A1Q8IZC6 MIR6090-201ENST00000622481 60 ntBASIC25.82■■□□□ 1.72
COL27A1Q8IZC6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.82■■□□□ 1.72
COL27A1Q8IZC6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL27A1Q8IZC6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.81■■□□□ 1.72
COL27A1Q8IZC6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL27A1Q8IZC6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.79■■□□□ 1.72
COL27A1Q8IZC6 CR559946.2-201ENST00000623684 991 ntBASIC25.79■■□□□ 1.72
COL27A1Q8IZC6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL27A1Q8IZC6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
COL27A1Q8IZC6 AC108673.1-201ENST00000510422 1159 ntBASIC25.79■■□□□ 1.72
COL27A1Q8IZC6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.79■■□□□ 1.72
COL27A1Q8IZC6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.79■■□□□ 1.72
COL27A1Q8IZC6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.78■■□□□ 1.72
COL27A1Q8IZC6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL27A1Q8IZC6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL27A1Q8IZC6 MIR3648-2-201ENST00000581792 180 ntBASIC25.75■■□□□ 1.71
COL27A1Q8IZC6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.75■■□□□ 1.71
COL27A1Q8IZC6 AC016575.1-201ENST00000607026 382 ntBASIC25.75■■□□□ 1.71
COL27A1Q8IZC6 MIR3648-1-201ENST00000615959 180 ntBASIC25.75■■□□□ 1.71
COL27A1Q8IZC6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL27A1Q8IZC6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL27A1Q8IZC6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.74■■□□□ 1.71
COL27A1Q8IZC6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
COL27A1Q8IZC6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL27A1Q8IZC6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL27A1Q8IZC6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
COL27A1Q8IZC6 MIR639-201ENST00000384974 98 ntBASIC25.73■■□□□ 1.71
COL27A1Q8IZC6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL27A1Q8IZC6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL27A1Q8IZC6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL27A1Q8IZC6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.71■■□□□ 1.71
COL27A1Q8IZC6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL27A1Q8IZC6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL27A1Q8IZC6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL27A1Q8IZC6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
COL27A1Q8IZC6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.7■■□□□ 1.7
COL27A1Q8IZC6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL27A1Q8IZC6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL27A1Q8IZC6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.68■■□□□ 1.7
COL27A1Q8IZC6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.66■■□□□ 1.7
COL27A1Q8IZC6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.66■■□□□ 1.7
COL27A1Q8IZC6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL27A1Q8IZC6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.66■■□□□ 1.7
COL27A1Q8IZC6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
COL27A1Q8IZC6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL27A1Q8IZC6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.64■■□□□ 1.7
COL27A1Q8IZC6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL27A1Q8IZC6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.63■■□□□ 1.69
COL27A1Q8IZC6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL27A1Q8IZC6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.62■■□□□ 1.69
COL27A1Q8IZC6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
COL27A1Q8IZC6 DUX4L11-201ENST00000611504 1267 ntBASIC25.62■■□□□ 1.69
COL27A1Q8IZC6 DUX4L12-201ENST00000614593 1267 ntBASIC25.62■■□□□ 1.69
COL27A1Q8IZC6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL27A1Q8IZC6 DUX4L14-201ENST00000621227 1267 ntBASIC25.62■■□□□ 1.69
COL27A1Q8IZC6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL27A1Q8IZC6 LINC01971-201ENST00000617888 1048 ntBASIC25.62■■□□□ 1.69
COL27A1Q8IZC6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.61■■□□□ 1.69
COL27A1Q8IZC6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL27A1Q8IZC6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
COL27A1Q8IZC6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL27A1Q8IZC6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.59■■□□□ 1.69
COL27A1Q8IZC6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL27A1Q8IZC6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
COL27A1Q8IZC6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL27A1Q8IZC6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL27A1Q8IZC6 AC120057.4-201ENST00000624722 1615 ntBASIC25.58■■□□□ 1.69
COL27A1Q8IZC6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.58■■□□□ 1.68
COL27A1Q8IZC6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL27A1Q8IZC6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL27A1Q8IZC6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.57■■□□□ 1.68
COL27A1Q8IZC6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
COL27A1Q8IZC6 HSD17B1P1-201ENST00000590052 955 ntBASIC25.56■■□□□ 1.68
COL27A1Q8IZC6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
COL27A1Q8IZC6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL27A1Q8IZC6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL27A1Q8IZC6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL27A1Q8IZC6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.54■■□□□ 1.68
COL27A1Q8IZC6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.53■■□□□ 1.68
COL27A1Q8IZC6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.53■■□□□ 1.68
COL27A1Q8IZC6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL27A1Q8IZC6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL27A1Q8IZC6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL27A1Q8IZC6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL27A1Q8IZC6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.51■■□□□ 1.67
COL27A1Q8IZC6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL27A1Q8IZC6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
COL27A1Q8IZC6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL27A1Q8IZC6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL27A1Q8IZC6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL27A1Q8IZC6 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
COL27A1Q8IZC6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL27A1Q8IZC6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
COL27A1Q8IZC6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL27A1Q8IZC6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms