Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.37■■■□□ 2.13
RNF135Q8IUD6 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.37■■■□□ 2.13
RNF135Q8IUD6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.37■■■□□ 2.13
RNF135Q8IUD6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.34■■■□□ 2.13
RNF135Q8IUD6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.34■■■□□ 2.13
RNF135Q8IUD6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF135Q8IUD6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.32■■■□□ 2.12
RNF135Q8IUD6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
RNF135Q8IUD6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RNF135Q8IUD6 CR559946.2-201ENST00000623684 991 ntBASIC28.3■■■□□ 2.12
RNF135Q8IUD6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RNF135Q8IUD6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.29■■■□□ 2.12
RNF135Q8IUD6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
RNF135Q8IUD6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RNF135Q8IUD6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RNF135Q8IUD6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
RNF135Q8IUD6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RNF135Q8IUD6 DUX4L11-201ENST00000611504 1267 ntBASIC28.27■■■□□ 2.12
RNF135Q8IUD6 DUX4L12-201ENST00000614593 1267 ntBASIC28.27■■■□□ 2.12
RNF135Q8IUD6 DUX4L14-201ENST00000621227 1267 ntBASIC28.27■■■□□ 2.12
RNF135Q8IUD6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
RNF135Q8IUD6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RNF135Q8IUD6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RNF135Q8IUD6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
RNF135Q8IUD6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.24■■■□□ 2.11
RNF135Q8IUD6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
RNF135Q8IUD6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
RNF135Q8IUD6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RNF135Q8IUD6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.23■■■□□ 2.11
RNF135Q8IUD6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
RNF135Q8IUD6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RNF135Q8IUD6 LINC01971-201ENST00000617888 1048 ntBASIC28.21■■■□□ 2.11
RNF135Q8IUD6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
RNF135Q8IUD6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
RNF135Q8IUD6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.2■■■□□ 2.1
RNF135Q8IUD6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
RNF135Q8IUD6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.2■■■□□ 2.1
RNF135Q8IUD6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
RNF135Q8IUD6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.19■■■□□ 2.1
RNF135Q8IUD6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.19■■■□□ 2.1
RNF135Q8IUD6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF135Q8IUD6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RNF135Q8IUD6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
RNF135Q8IUD6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
RNF135Q8IUD6 AC108673.1-201ENST00000510422 1159 ntBASIC28.16■■■□□ 2.1
RNF135Q8IUD6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
RNF135Q8IUD6 MIR6090-201ENST00000622481 60 ntBASIC28.16■■■□□ 2.1
RNF135Q8IUD6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.16■■■□□ 2.1
RNF135Q8IUD6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RNF135Q8IUD6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF135Q8IUD6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF135Q8IUD6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.15■■■□□ 2.1
RNF135Q8IUD6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.14■■■□□ 2.1
RNF135Q8IUD6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.14■■■□□ 2.1
RNF135Q8IUD6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
RNF135Q8IUD6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
RNF135Q8IUD6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.14■■■□□ 2.09
RNF135Q8IUD6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
RNF135Q8IUD6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RNF135Q8IUD6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RNF135Q8IUD6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RNF135Q8IUD6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.12■■■□□ 2.09
RNF135Q8IUD6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.1■■■□□ 2.09
RNF135Q8IUD6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RNF135Q8IUD6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
RNF135Q8IUD6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RNF135Q8IUD6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
RNF135Q8IUD6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RNF135Q8IUD6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RNF135Q8IUD6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RNF135Q8IUD6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RNF135Q8IUD6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
RNF135Q8IUD6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.06■■■□□ 2.08
RNF135Q8IUD6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
RNF135Q8IUD6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.04■■■□□ 2.08
RNF135Q8IUD6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.04■■■□□ 2.08
RNF135Q8IUD6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RNF135Q8IUD6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RNF135Q8IUD6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RNF135Q8IUD6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.03■■■□□ 2.08
RNF135Q8IUD6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.03■■■□□ 2.08
RNF135Q8IUD6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RNF135Q8IUD6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RNF135Q8IUD6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.02■■■□□ 2.08
RNF135Q8IUD6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28■■■□□ 2.07
RNF135Q8IUD6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
RNF135Q8IUD6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RNF135Q8IUD6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RNF135Q8IUD6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RNF135Q8IUD6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RNF135Q8IUD6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.97■■■□□ 2.07
RNF135Q8IUD6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RNF135Q8IUD6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.97■■■□□ 2.07
RNF135Q8IUD6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RNF135Q8IUD6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
RNF135Q8IUD6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.96■■■□□ 2.07
RNF135Q8IUD6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.95■■■□□ 2.06
RNF135Q8IUD6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RNF135Q8IUD6 RARRES2P2-201ENST00000394842 485 ntBASIC27.94■■■□□ 2.06
RNF135Q8IUD6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms