Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CREM-210ENST00000374721 2020 ntTSL 5 BASIC14.26□□□□□ -0.13
LCA10Q71F78 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LCA10Q71F78 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LCA10Q71F78 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC14.26□□□□□ -0.13
LCA10Q71F78 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LCA10Q71F78 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LCA10Q71F78 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LCA10Q71F78 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LCA10Q71F78 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LCA10Q71F78 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
LCA10Q71F78 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LCA10Q71F78 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LCA10Q71F78 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LCA10Q71F78 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LCA10Q71F78 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LCA10Q71F78 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC14.22□□□□□ -0.13
LCA10Q71F78 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LCA10Q71F78 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LCA10Q71F78 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LCA10Q71F78 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LCA10Q71F78 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LCA10Q71F78 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC14.19□□□□□ -0.14
LCA10Q71F78 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LCA10Q71F78 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LCA10Q71F78 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LCA10Q71F78 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LCA10Q71F78 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LCA10Q71F78 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCA10Q71F78 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCA10Q71F78 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LCA10Q71F78 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LCA10Q71F78 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LCA10Q71F78 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LCA10Q71F78 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LCA10Q71F78 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LCA10Q71F78 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCA10Q71F78 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LCA10Q71F78 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC14.15□□□□□ -0.14
LCA10Q71F78 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LCA10Q71F78 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.14□□□□□ -0.15
LCA10Q71F78 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LCA10Q71F78 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LCA10Q71F78 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LCA10Q71F78 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LCA10Q71F78 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LCA10Q71F78 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC14.13□□□□□ -0.15
LCA10Q71F78 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LCA10Q71F78 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LCA10Q71F78 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LCA10Q71F78 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LCA10Q71F78 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LCA10Q71F78 INO80B-203ENST00000409917 796 ntTSL 2 BASIC14.12□□□□□ -0.15
LCA10Q71F78 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC14.12□□□□□ -0.15
LCA10Q71F78 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LCA10Q71F78 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LCA10Q71F78 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LCA10Q71F78 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LCA10Q71F78 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LCA10Q71F78 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LCA10Q71F78 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC14.1□□□□□ -0.15
LCA10Q71F78 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
LCA10Q71F78 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC14.1□□□□□ -0.15
LCA10Q71F78 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LCA10Q71F78 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LCA10Q71F78 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
LCA10Q71F78 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LCA10Q71F78 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
LCA10Q71F78 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LCA10Q71F78 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LCA10Q71F78 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LCA10Q71F78 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LCA10Q71F78 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LCA10Q71F78 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
LCA10Q71F78 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LCA10Q71F78 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LCA10Q71F78 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LCA10Q71F78 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC14.05□□□□□ -0.16
LCA10Q71F78 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LCA10Q71F78 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LCA10Q71F78 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LCA10Q71F78 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LCA10Q71F78 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LCA10Q71F78 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LCA10Q71F78 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LCA10Q71F78 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
LCA10Q71F78 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC14.03□□□□□ -0.16
LCA10Q71F78 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LCA10Q71F78 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LCA10Q71F78 AC015813.7-201ENST00000623294 581 ntBASIC14.02□□□□□ -0.17
LCA10Q71F78 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms