Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC38.7■■■■□ 3.79
RPGRIP1LQ68CZ1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
RPGRIP1LQ68CZ1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
RPGRIP1LQ68CZ1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC38.69■■■■□ 3.78
RPGRIP1LQ68CZ1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC38.69■■■■□ 3.78
RPGRIP1LQ68CZ1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
RPGRIP1LQ68CZ1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC38.68■■■■□ 3.78
RPGRIP1LQ68CZ1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
RPGRIP1LQ68CZ1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
RPGRIP1LQ68CZ1 MIR6090-201ENST00000622481 60 ntBASIC38.67■■■■□ 3.78
RPGRIP1LQ68CZ1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
RPGRIP1LQ68CZ1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
RPGRIP1LQ68CZ1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
RPGRIP1LQ68CZ1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
RPGRIP1LQ68CZ1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC38.65■■■■□ 3.78
RPGRIP1LQ68CZ1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC38.65■■■■□ 3.78
RPGRIP1LQ68CZ1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
RPGRIP1LQ68CZ1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC38.64■■■■□ 3.78
RPGRIP1LQ68CZ1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC38.64■■■■□ 3.78
RPGRIP1LQ68CZ1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
RPGRIP1LQ68CZ1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
RPGRIP1LQ68CZ1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
RPGRIP1LQ68CZ1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC38.61■■■■□ 3.77
RPGRIP1LQ68CZ1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
RPGRIP1LQ68CZ1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC38.6■■■■□ 3.77
RPGRIP1LQ68CZ1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC38.6■■■■□ 3.77
RPGRIP1LQ68CZ1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC38.59■■■■□ 3.77
RPGRIP1LQ68CZ1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC38.58■■■■□ 3.77
RPGRIP1LQ68CZ1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC38.58■■■■□ 3.77
RPGRIP1LQ68CZ1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC38.57■■■■□ 3.77
RPGRIP1LQ68CZ1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
RPGRIP1LQ68CZ1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC38.57■■■■□ 3.76
RPGRIP1LQ68CZ1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
RPGRIP1LQ68CZ1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
RPGRIP1LQ68CZ1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
RPGRIP1LQ68CZ1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
RPGRIP1LQ68CZ1 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
RPGRIP1LQ68CZ1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC38.53■■■■□ 3.76
RPGRIP1LQ68CZ1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
RPGRIP1LQ68CZ1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC38.48■■■■□ 3.75
RPGRIP1LQ68CZ1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
RPGRIP1LQ68CZ1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC38.46■■■■□ 3.75
RPGRIP1LQ68CZ1 AC120057.4-201ENST00000624722 1615 ntBASIC38.46■■■■□ 3.75
RPGRIP1LQ68CZ1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC38.46■■■■□ 3.75
RPGRIP1LQ68CZ1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC38.44■■■■□ 3.74
RPGRIP1LQ68CZ1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
RPGRIP1LQ68CZ1 MIR639-201ENST00000384974 98 ntBASIC38.42■■■■□ 3.74
RPGRIP1LQ68CZ1 MIR4449-201ENST00000578365 66 ntBASIC38.42■■■■□ 3.74
RPGRIP1LQ68CZ1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
RPGRIP1LQ68CZ1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC38.4■■■■□ 3.74
RPGRIP1LQ68CZ1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC38.4■■■■□ 3.74
RPGRIP1LQ68CZ1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC38.38■■■■□ 3.74
RPGRIP1LQ68CZ1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
RPGRIP1LQ68CZ1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC38.38■■■■□ 3.73
RPGRIP1LQ68CZ1 LINC01971-201ENST00000617888 1048 ntBASIC38.38■■■■□ 3.73
RPGRIP1LQ68CZ1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC38.37■■■■□ 3.73
RPGRIP1LQ68CZ1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC38.37■■■■□ 3.73
RPGRIP1LQ68CZ1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
RPGRIP1LQ68CZ1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC38.35■■■■□ 3.73
RPGRIP1LQ68CZ1 MIR3648-2-201ENST00000581792 180 ntBASIC38.35■■■■□ 3.73
RPGRIP1LQ68CZ1 MIR3648-1-201ENST00000615959 180 ntBASIC38.35■■■■□ 3.73
RPGRIP1LQ68CZ1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC38.33■■■■□ 3.73
RPGRIP1LQ68CZ1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC38.33■■■■□ 3.73
RPGRIP1LQ68CZ1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
RPGRIP1LQ68CZ1 DUX4L11-201ENST00000611504 1267 ntBASIC38.31■■■■□ 3.72
RPGRIP1LQ68CZ1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC38.31■■■■□ 3.72
RPGRIP1LQ68CZ1 DUX4L12-201ENST00000614593 1267 ntBASIC38.31■■■■□ 3.72
RPGRIP1LQ68CZ1 DUX4L14-201ENST00000621227 1267 ntBASIC38.31■■■■□ 3.72
RPGRIP1LQ68CZ1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC38.31■■■■□ 3.72
RPGRIP1LQ68CZ1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC38.3■■■■□ 3.72
RPGRIP1LQ68CZ1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC38.3■■■■□ 3.72
RPGRIP1LQ68CZ1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC38.3■■■■□ 3.72
RPGRIP1LQ68CZ1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC38.29■■■■□ 3.72
RPGRIP1LQ68CZ1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC38.28■■■■□ 3.72
RPGRIP1LQ68CZ1 AC016575.1-201ENST00000607026 382 ntBASIC38.26■■■■□ 3.72
RPGRIP1LQ68CZ1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.71
RPGRIP1LQ68CZ1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC38.25■■■■□ 3.71
RPGRIP1LQ68CZ1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC38.24■■■■□ 3.71
RPGRIP1LQ68CZ1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC38.23■■■■□ 3.71
RPGRIP1LQ68CZ1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC38.23■■■■□ 3.71
RPGRIP1LQ68CZ1 CR559946.2-201ENST00000623684 991 ntBASIC38.23■■■■□ 3.71
RPGRIP1LQ68CZ1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC38.22■■■■□ 3.71
RPGRIP1LQ68CZ1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC38.22■■■■□ 3.71
RPGRIP1LQ68CZ1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC38.22■■■■□ 3.71
RPGRIP1LQ68CZ1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC38.22■■■■□ 3.71
RPGRIP1LQ68CZ1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC38.22■■■■□ 3.71
RPGRIP1LQ68CZ1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC38.21■■■■□ 3.71
RPGRIP1LQ68CZ1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC38.21■■■■□ 3.71
RPGRIP1LQ68CZ1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC38.2■■■■□ 3.71
RPGRIP1LQ68CZ1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
RPGRIP1LQ68CZ1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
RPGRIP1LQ68CZ1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
RPGRIP1LQ68CZ1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
RPGRIP1LQ68CZ1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
RPGRIP1LQ68CZ1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
RPGRIP1LQ68CZ1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC38.15■■■■□ 3.7
RPGRIP1LQ68CZ1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
RPGRIP1LQ68CZ1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC38.14■■■■□ 3.7
RPGRIP1LQ68CZ1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
RPGRIP1LQ68CZ1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms