Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.92□□□□□ -0.022e-9■■■■■ 51.1
DDX59Q5T1V6 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.142e-9■■■■■ 51.1
DDX59Q5T1V6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.34e-7■■■■■ 50.7
DDX59Q5T1V6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.24e-7■■■■■ 50.7
DDX59Q5T1V6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.98■□□□□ 0.154e-7■■■■■ 50.7
DDX59Q5T1V6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.21■□□□□ 0.512e-10■■■■■ 50.7
DDX59Q5T1V6 SARDH-206ENST00000427237 1957 ntTSL 217.2■□□□□ 0.342e-10■■■■■ 50.7
DDX59Q5T1V6 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.362e-10■■■■■ 50.7
DDX59Q5T1V6 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.482e-10■■■■■ 50.7
DDX59Q5T1V6 PROSER3-212ENST00000544876 419 ntTSL 310.27□□□□□ -0.772e-10■■■■■ 50.7
DDX59Q5T1V6 PRKAR1B-206ENST00000417852 651 ntTSL 217.45■□□□□ 0.388e-11■■■■■ 50.7
DDX59Q5T1V6 PRKAR1B-208ENST00000456696 518 ntTSL 515.18■□□□□ 0.028e-11■■■■■ 50.7
DDX59Q5T1V6 PRKAR1B-210ENST00000488474 617 ntTSL 312.81□□□□□ -0.368e-11■■■■■ 50.7
DDX59Q5T1V6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.625e-10■■■■■ 50.7
DDX59Q5T1V6 DHRS3-201ENST00000430996 826 ntTSL 317.11■□□□□ 0.331e-7■■■■■ 49.9
DDX59Q5T1V6 RNF38-208ENST00000488058 582 ntTSL 321.38■■□□□ 1.011e-8■■■■■ 48.9
DDX59Q5T1V6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.541e-8■■■■■ 48.9
DDX59Q5T1V6 EXOC3L4-206ENST00000560304 657 ntTSL 319.65■□□□□ 0.742e-12■■■■■ 48.8
DDX59Q5T1V6 EXOC3L4-204ENST00000559693 813 ntTSL 316.26■□□□□ 0.192e-12■■■■■ 48.8
DDX59Q5T1V6 EIF4G2-203ENST00000524932 1286 ntTSL 518.69■□□□□ 0.581e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-228ENST00000534246 523 ntTSL 214.47□□□□□ -0.091e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-210ENST00000527419 571 ntTSL 513.3□□□□□ -0.281e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-216ENST00000530702 563 ntTSL 211.56□□□□□ -0.561e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-214ENST00000530211 591 ntTSL 210.56□□□□□ -0.721e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.941e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-219ENST00000531507 591 ntTSL 59.12□□□□□ -0.951e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-226ENST00000532570 573 ntTSL 58.68□□□□□ -1.021e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-206ENST00000525972 584 ntTSL 25.73□□□□□ -1.491e-21■■■■■ 48.4
DDX59Q5T1V6 EIF4G2-212ENST00000528562 601 ntTSL 45.17□□□□□ -1.581e-21■■■■■ 48.4
DDX59Q5T1V6 COMTD1-203ENST00000469299 871 ntTSL 319.41■□□□□ 0.76e-10■■■■■ 48.2
DDX59Q5T1V6 COMTD1-204ENST00000470947 796 ntTSL 219.41■□□□□ 0.76e-10■■■■■ 48.2
DDX59Q5T1V6 COMTD1-202ENST00000460899 1094 ntTSL 219.41■□□□□ 0.76e-10■■■■■ 48.2
DDX59Q5T1V6 COMTD1-205ENST00000490521 562 ntTSL 219.25■□□□□ 0.676e-10■■■■■ 48.2
DDX59Q5T1V6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.466e-10■■■■■ 48.2
DDX59Q5T1V6 RGS12-211ENST00000506998 1625 ntTSL 1 (best)17.89■□□□□ 0.456e-10■■■■■ 48.2
DDX59Q5T1V6 COMTD1-207ENST00000494596 539 ntTSL 217.56■□□□□ 0.46e-10■■■■■ 48.2
DDX59Q5T1V6 NPHP4-209ENST00000489180 5548 ntTSL 217.48■□□□□ 0.396e-10■■■■■ 48.2
DDX59Q5T1V6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.276e-10■■■■■ 48.2
DDX59Q5T1V6 RGS12-206ENST00000503041 380 ntTSL 315.96■□□□□ 0.156e-10■■■■■ 48.2
DDX59Q5T1V6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.27■□□□□ 0.036e-10■■■■■ 48.2
DDX59Q5T1V6 RGS12-214ENST00000508158 2121 ntTSL 215.22■□□□□ 0.036e-10■■■■■ 48.2
DDX59Q5T1V6 RGS12-209ENST00000505570 241 ntTSL 514.75□□□□□ -0.056e-10■■■■■ 48.2
DDX59Q5T1V6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.096e-10■■■■■ 48.2
DDX59Q5T1V6 NPHP4-208ENST00000478423 4467 ntTSL 213.74□□□□□ -0.216e-10■■■■■ 48.2
DDX59Q5T1V6 NPHP4-203ENST00000378169 4213 ntTSL 1 (best)12.77□□□□□ -0.376e-10■■■■■ 48.2
DDX59Q5T1V6 RGS12-221ENST00000512990 328 ntTSL 512.65□□□□□ -0.386e-10■■■■■ 48.2
DDX59Q5T1V6 GALNT2-205ENST00000494106 692 ntTSL 512.36□□□□□ -0.436e-10■■■■■ 48.2
DDX59Q5T1V6 PLXNB2-210ENST00000479818 1916 ntTSL 1 (best)16.52■□□□□ 0.237e-12■■■■■ 48.1
DDX59Q5T1V6 PLXNB2-208ENST00000463165 3038 ntTSL 212.89□□□□□ -0.357e-12■■■■■ 48.1
DDX59Q5T1V6 PLXNB2-209ENST00000479701 3504 ntTSL 212.78□□□□□ -0.367e-12■■■■■ 48.1
DDX59Q5T1V6 PLXNB2-213ENST00000610984 3443 ntTSL 5 BASIC10.91□□□□□ -0.667e-12■■■■■ 48.1
DDX59Q5T1V6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.591e-7■■■■■ 48
DDX59Q5T1V6 SSH1-208ENST00000548522 602 ntTSL 314.59□□□□□ -0.071e-7■■■■■ 48
DDX59Q5T1V6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.411e-7■■■■■ 48
DDX59Q5T1V6 ANKRD11-204ENST00000378332 1982 ntTSL 220.04■□□□□ 0.81e-6■■■■■ 47.9
DDX59Q5T1V6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.761e-6■■■■■ 47.9
DDX59Q5T1V6 ANKRD11-207ENST00000562816 573 ntTSL 49.97□□□□□ -0.811e-6■■■■■ 47.9
DDX59Q5T1V6 RECQL4-205ENST00000532846 1055 ntTSL 515.97■□□□□ 0.153e-10■■■■■ 47.8
DDX59Q5T1V6 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.152e-6■■■■■ 47.8
DDX59Q5T1V6 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.382e-6■■■■■ 47.8
DDX59Q5T1V6 GRAMD4-205ENST00000447351 375 ntTSL 312.34□□□□□ -0.432e-6■■■■■ 47.8
DDX59Q5T1V6 GRAMD4-207ENST00000490378 193 ntTSL 32.62□□□□□ -1.992e-6■■■■■ 47.8
DDX59Q5T1V6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.46■□□□□ 0.397e-19■■■■■ 47.7
DDX59Q5T1V6 RBCK1-209ENST00000415942 2613 ntTSL 517.13■□□□□ 0.337e-19■■■■■ 47.7
DDX59Q5T1V6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.9■□□□□ 0.37e-19■■■■■ 47.7
DDX59Q5T1V6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.277e-19■■■■■ 47.7
DDX59Q5T1V6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.34■□□□□ 0.057e-19■■■■■ 47.7
DDX59Q5T1V6 RBCK1-204ENST00000382214 2752 ntTSL 1 (best)15.22■□□□□ 0.037e-19■■■■■ 47.7
DDX59Q5T1V6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.381e-7■■■■■ 47.6
DDX59Q5T1V6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.48■□□□□ 0.391e-7■■■■■ 47.6
DDX59Q5T1V6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.56■□□□□ 0.241e-7■■■■■ 47.6
DDX59Q5T1V6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.49■□□□□ 0.231e-7■■■■■ 47.6
DDX59Q5T1V6 PACS2-204ENST00000546915 576 ntTSL 414.05□□□□□ -0.161e-7■■■■■ 47.6
DDX59Q5T1V6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.443e-8■■■■■ 47.5
DDX59Q5T1V6 SLCO4A1-208ENST00000497209 3092 ntTSL 1 (best)15.03■□□□□ -03e-8■■■■■ 47.5
DDX59Q5T1V6 MNT-204ENST00000572892 556 ntTSL 418.47■□□□□ 0.551e-11■■■■■ 47.4
DDX59Q5T1V6 MNT-207ENST00000575374 936 ntTSL 313.43□□□□□ -0.261e-11■■■■■ 47.4
DDX59Q5T1V6 EXOC3L4-207ENST00000560925 2341 ntTSL 222.91■■□□□ 1.264e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-202ENST00000541135 580 ntAPPRIS P1 TSL 417.26■□□□□ 0.359e-10■■■■■ 47.3
DDX59Q5T1V6 DUS2-203ENST00000561965 1712 ntTSL 516.93■□□□□ 0.39e-10■■■■■ 47.3
DDX59Q5T1V6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.05■□□□□ -09e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-206ENST00000544801 875 ntTSL 514.68□□□□□ -0.069e-10■■■■■ 47.3
DDX59Q5T1V6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.19e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-207ENST00000544880 591 ntTSL 413.96□□□□□ -0.179e-10■■■■■ 47.3
DDX59Q5T1V6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.229e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-201ENST00000544025 563 ntTSL 48.23□□□□□ -1.099e-10■■■■■ 47.3
DDX59Q5T1V6 DUS2-204ENST00000562246 736 ntTSL 28.08□□□□□ -1.129e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC7.93□□□□□ -1.149e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-203ENST00000536670 449 ntTSL 57.87□□□□□ -1.159e-10■■■■■ 47.3
DDX59Q5T1V6 AP003108.2-205ENST00000538594 569 ntTSL 47.63□□□□□ -1.199e-10■■■■■ 47.3
DDX59Q5T1V6 EPS8L2-220ENST00000531393 2304 ntTSL 1 (best)18.99■□□□□ 0.631e-6■■■■■ 47.2
DDX59Q5T1V6 EPS8L2-212ENST00000528770 2233 ntTSL 217.43■□□□□ 0.381e-6■■■■■ 47.2
DDX59Q5T1V6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.647e-8■■■■■ 47.2
DDX59Q5T1V6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.341e-6■■■■■ 47.2
DDX59Q5T1V6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.54■□□□□ 0.886e-10■■■■■ 47.2
DDX59Q5T1V6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.846e-10■■■■■ 47.2
DDX59Q5T1V6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.34■□□□□ 0.376e-10■■■■■ 47.2
DDX59Q5T1V6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.346e-10■■■■■ 47.2
DDX59Q5T1V6 SEC16B-202ENST00000327037 1807 ntTSL 216.98■□□□□ 0.313e-10■■■■■ 47
DDX59Q5T1V6 SEC16B-208ENST00000528461 3277 ntTSL 1 (best)12.92□□□□□ -0.343e-10■■■■■ 47
Retrieved 100 of 7,289 protein–RNA pairs in 37.5 ms