RNA–Protein interactions for RNA: ENST00000479818.5

PLXNB2-210, Transcript of plexin B2, humanhuman

TSL 1 (best)

Gene PLXNB2, Length 1,916 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB2-210ENST00000479818 NISCHQ9Y2I1 1504 aa39.75■■■■□ 3.95
PLXNB2-210ENST00000479818 CCDC180Q9P1Z9 1646 aa34.75■■■■□ 3.15
PLXNB2-210ENST00000479818 ZCCHC6Q5VYS8 1495 aaKnown RBP33.38■■■□□ 2.93
PLXNB2-210ENST00000479818 ABCC9O60706 1549 aa32.95■■■□□ 2.87
PLXNB2-210ENST00000479818 DCAF8L2P0C7V8 631 aa32.94■■■□□ 2.86
PLXNB2-210ENST00000479818 DCAF1Q9Y4B6 1507 aa32.8■■■□□ 2.84
PLXNB2-210ENST00000479818 SHROOM4Q9ULL8 1493 aa32.49■■■□□ 2.79
PLXNB2-210ENST00000479818 MYO15BQ96JP2 1530 aa32.42■■■□□ 2.78
PLXNB2-210ENST00000479818 NACADO15069 1562 aa32.33■■■□□ 2.77
PLXNB2-210ENST00000479818 RB1CC1Q8TDY2 1594 aa32.11■■■□□ 2.73
PLXNB2-210ENST00000479818 SCRIBQ14160 1630 aa32.01■■■□□ 2.72
PLXNB2-210ENST00000479818 UNC13AQ9UPW8 1703 aa31.62■■■□□ 2.65
PLXNB2-210ENST00000479818 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
PLXNB2-210ENST00000479818 BICRAQ9NZM4 1560 aa31.16■■■□□ 2.58
PLXNB2-210ENST00000479818 PABPN1Q86U42 306 aaKnown RBP eCLIP31.05■■■□□ 2.562e-6■□□□□ 9.6
PLXNB2-210ENST00000479818 CECR2Q9BXF3 1484 aa30.93■■■□□ 2.54
PLXNB2-210ENST00000479818 RSF1Q96T23 1441 aaPredicted RBP30.8■■■□□ 2.52
PLXNB2-210ENST00000479818 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
PLXNB2-210ENST00000479818 BAZ1AQ9NRL2 1556 aaPredicted RBP30.71■■■□□ 2.51
PLXNB2-210ENST00000479818 SMARCA4P51532 1647 aa30.63■■■□□ 2.49
PLXNB2-210ENST00000479818 WIZO95785 1651 aa30.57■■■□□ 2.48
PLXNB2-210ENST00000479818 EIF4G1Q04637 1599 aaKnown RBP30.22■■■□□ 2.43
PLXNB2-210ENST00000479818 PEG3Q9GZU2 1588 aa30.19■■■□□ 2.42
PLXNB2-210ENST00000479818 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
PLXNB2-210ENST00000479818 ATAD2BQ9ULI0 1458 aa30.08■■■□□ 2.41
PLXNB2-210ENST00000479818 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
PLXNB2-210ENST00000479818 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
PLXNB2-210ENST00000479818 CCDC88BA6NC98 1476 aa29.85■■■□□ 2.37
PLXNB2-210ENST00000479818 CC2D2AQ9P2K1 1620 aa29.83■■■□□ 2.37
PLXNB2-210ENST00000479818 NCAPD3P42695 1498 aa29.8■■■□□ 2.36
PLXNB2-210ENST00000479818 HMGXB3Q12766 1538 aa29.79■■■□□ 2.36
PLXNB2-210ENST00000479818 CHIC1Q5VXU3 224 aa29.74■■■□□ 2.35
PLXNB2-210ENST00000479818 ABCC8Q09428 1581 aa29.28■■■□□ 2.28
PLXNB2-210ENST00000479818 TRIM41Q8WV44 630 aa29.28■■■□□ 2.28
PLXNB2-210ENST00000479818 PRDM2Q13029 1718 aa29.15■■■□□ 2.26
PLXNB2-210ENST00000479818 CFTRP13569 1480 aa29.14■■■□□ 2.25
PLXNB2-210ENST00000479818 DNAJC5BQ9UF47 199 aa29.1■■■□□ 2.25
PLXNB2-210ENST00000479818 CADPSQ9ULU8 1353 aa29.04■■■□□ 2.24
PLXNB2-210ENST00000479818 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
PLXNB2-210ENST00000479818 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
PLXNB2-210ENST00000479818 NESP48681 1621 aa28.92■■■□□ 2.22
PLXNB2-210ENST00000479818 LAMC3Q9Y6N6 1575 aa28.87■■■□□ 2.21
PLXNB2-210ENST00000479818 FAM9AQ8IZU1 332 aaPredicted RBP28.82■■■□□ 2.2
PLXNB2-210ENST00000479818 TOP2BQ02880 1626 aa28.81■■■□□ 2.2
PLXNB2-210ENST00000479818 BIVM-ERCC5R4GMW8 1640 aa28.81■■■□□ 2.2
PLXNB2-210ENST00000479818 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
PLXNB2-210ENST00000479818 CUX1P39880 1505 aa28.76■■■□□ 2.19
PLXNB2-210ENST00000479818 LOC105371045A0A1W2PR82 267 aa28.66■■■□□ 2.18
PLXNB2-210ENST00000479818 SOGA1O94964 1423 aa28.65■■■□□ 2.18
PLXNB2-210ENST00000479818 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.18
PLXNB2-210ENST00000479818 CEP164Q9UPV0 1460 aa28.6■■■□□ 2.17
PLXNB2-210ENST00000479818 PDS5BQ9NTI5 1447 aa28.6■■■□□ 2.17
PLXNB2-210ENST00000479818 RUSC2Q8N2Y8 1516 aa28.58■■■□□ 2.17
PLXNB2-210ENST00000479818 DNMBPQ6XZF7 1577 aa28.51■■■□□ 2.16
PLXNB2-210ENST00000479818 EEA1Q15075 1411 aa28.49■■■□□ 2.15
PLXNB2-210ENST00000479818 EHMT2Q96KQ7 1210 aa28.48■■■□□ 2.15
PLXNB2-210ENST00000479818 TOPBP1Q92547 1522 aa28.46■■■□□ 2.15
PLXNB2-210ENST00000479818 FGD5Q6ZNL6 1462 aa28.45■■■□□ 2.15
PLXNB2-210ENST00000479818 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
PLXNB2-210ENST00000479818 CSRNP3Q8WYN3 585 aa28.37■■■□□ 2.13
PLXNB2-210ENST00000479818 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
PLXNB2-210ENST00000479818 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
PLXNB2-210ENST00000479818 KIF27Q86VH2 1401 aa28.26■■■□□ 2.11
PLXNB2-210ENST00000479818 CUX2O14529 1486 aa28.25■■■□□ 2.11
PLXNB2-210ENST00000479818 ERCC6Q03468 1493 aa28.25■■■□□ 2.11
PLXNB2-210ENST00000479818 RAD54L2Q9Y4B4 1467 aa28.25■■■□□ 2.11
PLXNB2-210ENST00000479818 KIF21BO75037 1637 aa28.21■■■□□ 2.11
PLXNB2-210ENST00000479818 WDR97A6NE52 1622 aa28.17■■■□□ 2.1
PLXNB2-210ENST00000479818 GOLGA3Q08378 1498 aa28.16■■■□□ 2.1
PLXNB2-210ENST00000479818 ABCA10Q8WWZ4 1543 aa28.15■■■□□ 2.1
PLXNB2-210ENST00000479818 WDR62O43379 1518 aa28.13■■■□□ 2.09
PLXNB2-210ENST00000479818 THOC2Q8NI27 1593 aaKnown RBP28.12■■■□□ 2.09
PLXNB2-210ENST00000479818 RAPGEF2Q9Y4G8 1499 aa28.07■■■□□ 2.08
PLXNB2-210ENST00000479818 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
PLXNB2-210ENST00000479818 UBTFP17480 764 aaKnown RBP28.06■■■□□ 2.08
PLXNB2-210ENST00000479818 PRXQ9BXM0 1461 aa28.04■■■□□ 2.08
PLXNB2-210ENST00000479818 TNIKQ9UKE5 1360 aa28.01■■■□□ 2.07
PLXNB2-210ENST00000479818 ERICH3Q5RHP9 1530 aa28■■■□□ 2.07
PLXNB2-210ENST00000479818 IGF1RP08069 1367 aa28■■■□□ 2.07
PLXNB2-210ENST00000479818 ABCA5Q8WWZ7 1642 aa28■■■□□ 2.07
PLXNB2-210ENST00000479818 TDRD9Q8NDG6 1382 aaKnown RBP27.96■■■□□ 2.07
PLXNB2-210ENST00000479818 CEP162Q5TB80 1403 aa27.91■■■□□ 2.06
PLXNB2-210ENST00000479818 GAPVD1Q14C86 1478 aa27.91■■■□□ 2.06
PLXNB2-210ENST00000479818 IFT140Q96RY7 1462 aa27.89■■■□□ 2.05
PLXNB2-210ENST00000479818 CARMIL1Q5VZK9 1371 aa27.88■■■□□ 2.05
PLXNB2-210ENST00000479818 CUL7Q14999 1698 aa27.88■■■□□ 2.05
PLXNB2-210ENST00000479818 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
PLXNB2-210ENST00000479818 AQRO60306 1485 aaKnown RBP eCLIP27.81■■■□□ 2.043e-6■■■□□ 18.8
PLXNB2-210ENST00000479818 ZNF608Q9ULD9 1512 aaPredicted RBP27.8■■■□□ 2.04
PLXNB2-210ENST00000479818 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
PLXNB2-210ENST00000479818 RANGAP1P46060 587 aaPredicted RBP27.73■■■□□ 2.03
PLXNB2-210ENST00000479818 CLIP1P30622 1438 aa27.7■■■□□ 2.03
PLXNB2-210ENST00000479818 GRIN2BQ13224 1484 aa27.68■■■□□ 2.02
PLXNB2-210ENST00000479818 ADAMTS12P58397 1594 aa27.63■■■□□ 2.01
PLXNB2-210ENST00000479818 CTTNBP2Q8WZ74 1663 aa27.63■■■□□ 2.01
PLXNB2-210ENST00000479818 FHAD1B1AJZ9 1412 aa27.57■■■□□ 2
PLXNB2-210ENST00000479818 SNAPC4Q5SXM2 1469 aa27.55■■■□□ 2
PLXNB2-210ENST00000479818 ARAP1Q96P48 1450 aa27.47■■□□□ 1.99
PLXNB2-210ENST00000479818 ARHGAP35Q9NRY4 1499 aa27.46■■□□□ 1.99
PLXNB2-210ENST00000479818 MAGI1Q96QZ7 1491 aaPredicted RBP27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms