RNA–Protein interactions for RNA: ENST00000490378.1

GRAMD4-207, Transcript of GRAM domain containing 4, humanhuman

TSL 3

Gene GRAMD4, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-207ENST00000490378 AEBP2Q6ZN18 517 aaPredicted RBP9.29□□□□□ -0.92
GRAMD4-207ENST00000490378 CHIC1Q5VXU3 224 aa8.6□□□□□ -1.03
GRAMD4-207ENST00000490378 SENP3Q9H4L4 574 aaPredicted RBP7.91□□□□□ -1.14
GRAMD4-207ENST00000490378 PHF23Q9BUL5 403 aaPredicted RBP7.79□□□□□ -1.16
GRAMD4-207ENST00000490378 FOXD1Q16676 465 aa7.43□□□□□ -1.22
GRAMD4-207ENST00000490378 POTEDQ86YR6 584 aa7.35□□□□□ -1.23
GRAMD4-207ENST00000490378 MSH5O43196 834 aa7.02□□□□□ -1.29
GRAMD4-207ENST00000490378 PIAS4Q8N2W9 510 aaPredicted RBP6.84□□□□□ -1.31
GRAMD4-207ENST00000490378 PPP6R1Q9UPN7 881 aa6.76□□□□□ -1.33
GRAMD4-207ENST00000490378 ADRA2BP18089 450 aa6.69□□□□□ -1.34
GRAMD4-207ENST00000490378 PLPPR3Q6T4P5 718 aa6.66□□□□□ -1.34
GRAMD4-207ENST00000490378 NISCHQ9Y2I1 1504 aa6.33□□□□□ -1.4
GRAMD4-207ENST00000490378 DMRT2Q9Y5R5 561 aa6.25□□□□□ -1.41
GRAMD4-207ENST00000490378 MAPK8IP2Q13387 824 aaPredicted RBP6.24□□□□□ -1.41
GRAMD4-207ENST00000490378 CACNB1Q02641 598 aaPredicted RBP6.18□□□□□ -1.42
GRAMD4-207ENST00000490378 DNAJC5BQ9UF47 199 aa6.14□□□□□ -1.43
GRAMD4-207ENST00000490378 ABCC9O60706 1549 aa6.1□□□□□ -1.43
GRAMD4-207ENST00000490378 SCAF1Q9H7N4 1312 aaKnown RBP6.08□□□□□ -1.44
GRAMD4-207ENST00000490378 RNF39Q9H2S5 420 aa6□□□□□ -1.45
GRAMD4-207ENST00000490378 HOXD11P31277 338 aaPredicted RBP5.93□□□□□ -1.46
GRAMD4-207ENST00000490378 DCAF8L1A6NGE4 600 aa5.92□□□□□ -1.46
GRAMD4-207ENST00000490378 C1QBPQ07021 282 aaKnown RBP5.88□□□□□ -1.47
GRAMD4-207ENST00000490378 PPP4R3CPQ6ZMV5 832 aa5.81□□□□□ -1.48
GRAMD4-207ENST00000490378 RNF216Q9NWF9 866 aaPredicted RBP5.79□□□□□ -1.48
GRAMD4-207ENST00000490378 CNKSR2Q8WXI2 1034 aa5.77□□□□□ -1.49
GRAMD4-207ENST00000490378 CCDC180Q9P1Z9 1646 aa5.76□□□□□ -1.49
GRAMD4-207ENST00000490378 DNAJC5Q9H3Z4 198 aa5.71□□□□□ -1.5
GRAMD4-207ENST00000490378 POTEHQ6S545 545 aa5.69□□□□□ -1.5
GRAMD4-207ENST00000490378 PABPN1Q86U42 306 aaKnown RBP eCLIP5.67□□□□□ -1.5
GRAMD4-207ENST00000490378 UNC13AQ9UPW8 1703 aa5.65□□□□□ -1.51
GRAMD4-207ENST00000490378 RB1CC1Q8TDY2 1594 aa5.6□□□□□ -1.51
GRAMD4-207ENST00000490378 BICRAQ9NZM4 1560 aa5.59□□□□□ -1.51
GRAMD4-207ENST00000490378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.57□□□□□ -1.52
GRAMD4-207ENST00000490378 DSG3P32926 999 aa5.53□□□□□ -1.52
GRAMD4-207ENST00000490378 CC2D2AQ9P2K1 1620 aa5.51□□□□□ -1.53
GRAMD4-207ENST00000490378 NACADO15069 1562 aa5.5□□□□□ -1.53
GRAMD4-207ENST00000490378 CECR2Q9BXF3 1484 aa5.49□□□□□ -1.53
GRAMD4-207ENST00000490378 SPINK5Q9NQ38 1064 aaPredicted RBP5.48□□□□□ -1.53
GRAMD4-207ENST00000490378 U3KPZ7 1027 aaPredicted RBP5.48□□□□□ -1.53
GRAMD4-207ENST00000490378 NCBP3Q53F19 620 aaKnown RBP5.47□□□□□ -1.53
GRAMD4-207ENST00000490378 DCAF8L2P0C7V8 631 aa5.44□□□□□ -1.54
GRAMD4-207ENST00000490378 NPM3O75607 178 aaKnown RBP5.43□□□□□ -1.54
GRAMD4-207ENST00000490378 CAPN15O75808 1086 aa5.43□□□□□ -1.54
GRAMD4-207ENST00000490378 EIF4G1Q04637 1599 aaKnown RBP5.4□□□□□ -1.55
GRAMD4-207ENST00000490378 MYO15BQ96JP2 1530 aa5.32□□□□□ -1.56
GRAMD4-207ENST00000490378 TRIM41Q8WV44 630 aa5.31□□□□□ -1.56
GRAMD4-207ENST00000490378 CUX2O14529 1486 aa5.29□□□□□ -1.56
GRAMD4-207ENST00000490378 ABCB7O75027 752 aa5.29□□□□□ -1.56
GRAMD4-207ENST00000490378 SLC4A2P04920 1241 aa5.28□□□□□ -1.56
GRAMD4-207ENST00000490378 TRHP20396 242 aaPredicted RBP5.28□□□□□ -1.56
GRAMD4-207ENST00000490378 ZNF219Q9P2Y4 722 aaPredicted RBP5.28□□□□□ -1.56
GRAMD4-207ENST00000490378 SHROOM4Q9ULL8 1493 aa5.27□□□□□ -1.57
GRAMD4-207ENST00000490378 SCRIBQ14160 1630 aa5.27□□□□□ -1.57
GRAMD4-207ENST00000490378 CHRDL2Q6WN34 429 aa5.25□□□□□ -1.57
GRAMD4-207ENST00000490378 APLP2Q06481 763 aa5.24□□□□□ -1.57
GRAMD4-207ENST00000490378 RBM42Q9BTD8 480 aaKnown RBP5.24□□□□□ -1.57
GRAMD4-207ENST00000490378 NESP48681 1621 aa5.22□□□□□ -1.57
GRAMD4-207ENST00000490378 SP7Q8TDD2 431 aaPredicted RBP5.2□□□□□ -1.58
GRAMD4-207ENST00000490378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.18□□□□□ -1.58
GRAMD4-207ENST00000490378 HNRNPUL2Q1KMD3 747 aaKnown RBP5.18□□□□□ -1.58
GRAMD4-207ENST00000490378 ERCC6Q03468 1493 aa5.18□□□□□ -1.58
GRAMD4-207ENST00000490378 THOC2Q8NI27 1593 aaKnown RBP5.17□□□□□ -1.58
GRAMD4-207ENST00000490378 ZCCHC6Q5VYS8 1495 aaKnown RBP5.17□□□□□ -1.58
GRAMD4-207ENST00000490378 DCAF1Q9Y4B6 1507 aa5.16□□□□□ -1.58
GRAMD4-207ENST00000490378 SAMD1Q6SPF0 538 aaPredicted RBP5.15□□□□□ -1.59
GRAMD4-207ENST00000490378 NCAPD3P42695 1498 aa5.13□□□□□ -1.59
GRAMD4-207ENST00000490378 KIF21AQ7Z4S6 1674 aa5.12□□□□□ -1.59
GRAMD4-207ENST00000490378 POLA2Q14181 598 aa5.1□□□□□ -1.59
GRAMD4-207ENST00000490378 ATAD2BQ9ULI0 1458 aa5.08□□□□□ -1.6
GRAMD4-207ENST00000490378 KCNA4P22459 653 aa5.08□□□□□ -1.6
GRAMD4-207ENST00000490378 AKT1S1Q96B36 256 aa5.08□□□□□ -1.6
GRAMD4-207ENST00000490378 SMARCA2P51531 1590 aa5.08□□□□□ -1.6
GRAMD4-207ENST00000490378 PIP4P2Q8N4L2 257 aa5.07□□□□□ -1.6
GRAMD4-207ENST00000490378 RIMBP3CA6NJZ7 1639 aa5.06□□□□□ -1.6
GRAMD4-207ENST00000490378 RIMBP3BA6NNM3 1639 aa5.06□□□□□ -1.6
GRAMD4-207ENST00000490378 RIMBP3Q9UFD9 1639 aa5.06□□□□□ -1.6
GRAMD4-207ENST00000490378 BAZ1AQ9NRL2 1556 aaPredicted RBP5.05□□□□□ -1.6
GRAMD4-207ENST00000490378 REM2Q8IYK8 340 aaPredicted RBP5.04□□□□□ -1.6
GRAMD4-207ENST00000490378 HAX1O00165 279 aa5.02□□□□□ -1.61
GRAMD4-207ENST00000490378 FXR2P51116 673 aaKnown RBP eCLIP5.02□□□□□ -1.61
GRAMD4-207ENST00000490378 OSCARQ8IYS5 282 aa5.02□□□□□ -1.61
GRAMD4-207ENST00000490378 HMGXB3Q12766 1538 aa5.02□□□□□ -1.61
GRAMD4-207ENST00000490378 LAMC3Q9Y6N6 1575 aa5.01□□□□□ -1.61
GRAMD4-207ENST00000490378 MYCNP04198 464 aaPredicted RBP5.01□□□□□ -1.61
GRAMD4-207ENST00000490378 EVX2Q03828 476 aa5□□□□□ -1.61
GRAMD4-207ENST00000490378 SMARCA4P51532 1647 aa5□□□□□ -1.61
GRAMD4-207ENST00000490378 WDR62O43379 1518 aa4.99□□□□□ -1.61
GRAMD4-207ENST00000490378 ARHGEF11O15085 1522 aa4.98□□□□□ -1.61
GRAMD4-207ENST00000490378 PITPNM1O00562 1244 aa4.98□□□□□ -1.61
GRAMD4-207ENST00000490378 MRC2Q9UBG0 1479 aa4.97□□□□□ -1.61
GRAMD4-207ENST00000490378 CYB5RLQ6IPT4 315 aa4.97□□□□□ -1.61
GRAMD4-207ENST00000490378 ZBTB12Q9Y330 459 aaPredicted RBP4.96□□□□□ -1.62
GRAMD4-207ENST00000490378 PDS5BQ9NTI5 1447 aa4.96□□□□□ -1.62
GRAMD4-207ENST00000490378 BAZ1BQ9UIG0 1483 aaKnown RBP4.95□□□□□ -1.62
GRAMD4-207ENST00000490378 ATF5Q9Y2D1 282 aaPredicted RBP4.95□□□□□ -1.62
GRAMD4-207ENST00000490378 ARAP1Q96P48 1450 aa4.94□□□□□ -1.62
GRAMD4-207ENST00000490378 CADPSQ9ULU8 1353 aa4.94□□□□□ -1.62
GRAMD4-207ENST00000490378 ILDR1Q86SU0 546 aaPredicted RBP4.94□□□□□ -1.62
GRAMD4-207ENST00000490378 PEG3Q9GZU2 1588 aa4.94□□□□□ -1.62
GRAMD4-207ENST00000490378 MROH2BQ7Z745 1585 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms