RNA–Protein interactions for RNA: ENST00000544880.1

AP003108.2-207, humanhuman

TSL 4

Gene AP003108.2, Length 591 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-207ENST00000544880 NISCHQ9Y2I1 1504 aa39.26■■■■□ 3.88
AP003108.2-207ENST00000544880 ABCC9O60706 1549 aa35.19■■■■□ 3.22
AP003108.2-207ENST00000544880 CCDC180Q9P1Z9 1646 aa35.17■■■■□ 3.22
AP003108.2-207ENST00000544880 RB1CC1Q8TDY2 1594 aa33.48■■■□□ 2.95
AP003108.2-207ENST00000544880 NACADO15069 1562 aa33.27■■■□□ 2.92
AP003108.2-207ENST00000544880 DCAF8L2P0C7V8 631 aa33.14■■■□□ 2.9
AP003108.2-207ENST00000544880 DNAJC5BQ9UF47 199 aa32.99■■■□□ 2.87
AP003108.2-207ENST00000544880 MYO15BQ96JP2 1530 aa32.84■■■□□ 2.85
AP003108.2-207ENST00000544880 PABPN1Q86U42 306 aaKnown RBP eCLIP32.79■■■□□ 2.84
AP003108.2-207ENST00000544880 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
AP003108.2-207ENST00000544880 ZCCHC6Q5VYS8 1495 aaKnown RBP32.55■■■□□ 2.8
AP003108.2-207ENST00000544880 BICRAQ9NZM4 1560 aa32.51■■■□□ 2.79
AP003108.2-207ENST00000544880 DCAF1Q9Y4B6 1507 aa32.43■■■□□ 2.78
AP003108.2-207ENST00000544880 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
AP003108.2-207ENST00000544880 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
AP003108.2-207ENST00000544880 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
AP003108.2-207ENST00000544880 EIF4G1Q04637 1599 aaKnown RBP31.72■■■□□ 2.67
AP003108.2-207ENST00000544880 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.66
AP003108.2-207ENST00000544880 NCAPD3P42695 1498 aa30.74■■■□□ 2.51
AP003108.2-207ENST00000544880 ATAD2BQ9ULI0 1458 aa30.65■■■□□ 2.5
AP003108.2-207ENST00000544880 SMARCA4P51532 1647 aa30.6■■■□□ 2.49
AP003108.2-207ENST00000544880 SMARCA2P51531 1590 aa30.54■■■□□ 2.48
AP003108.2-207ENST00000544880 HMGXB3Q12766 1538 aa30.49■■■□□ 2.47
AP003108.2-207ENST00000544880 BAZ1AQ9NRL2 1556 aaPredicted RBP30.46■■■□□ 2.47
AP003108.2-207ENST00000544880 ERCC6Q03468 1493 aa30.38■■■□□ 2.45
AP003108.2-207ENST00000544880 BAZ1BQ9UIG0 1483 aaKnown RBP30.35■■■□□ 2.45
AP003108.2-207ENST00000544880 PEG3Q9GZU2 1588 aa30.31■■■□□ 2.44
AP003108.2-207ENST00000544880 CUX2O14529 1486 aa30.31■■■□□ 2.44
AP003108.2-207ENST00000544880 MROH2BQ7Z745 1585 aa30.26■■■□□ 2.43
AP003108.2-207ENST00000544880 DNAJC5Q9H3Z4 198 aa30.26■■■□□ 2.43
AP003108.2-207ENST00000544880 NESP48681 1621 aa30.24■■■□□ 2.43
AP003108.2-207ENST00000544880 LAMC3Q9Y6N6 1575 aa30.01■■■□□ 2.39
AP003108.2-207ENST00000544880 THOC2Q8NI27 1593 aaKnown RBP29.9■■■□□ 2.38
AP003108.2-207ENST00000544880 PDS5BQ9NTI5 1447 aa29.87■■■□□ 2.37
AP003108.2-207ENST00000544880 WIZO95785 1651 aa29.86■■■□□ 2.37
AP003108.2-207ENST00000544880 CADPSQ9ULU8 1353 aa29.81■■■□□ 2.36
AP003108.2-207ENST00000544880 KIF21AQ7Z4S6 1674 aa29.79■■■□□ 2.36
AP003108.2-207ENST00000544880 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
AP003108.2-207ENST00000544880 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
AP003108.2-207ENST00000544880 WDR62O43379 1518 aa29.52■■■□□ 2.32
AP003108.2-207ENST00000544880 TOP2AP11388 1531 aaKnown RBP29.51■■■□□ 2.32
AP003108.2-207ENST00000544880 CEP164Q9UPV0 1460 aa29.49■■■□□ 2.31
AP003108.2-207ENST00000544880 CFTRP13569 1480 aa29.48■■■□□ 2.31
AP003108.2-207ENST00000544880 FANCD2Q9BXW9 1451 aa29.47■■■□□ 2.31
AP003108.2-207ENST00000544880 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
AP003108.2-207ENST00000544880 CCDC88BA6NC98 1476 aa29.19■■■□□ 2.26
AP003108.2-207ENST00000544880 PRDM2Q13029 1718 aa29.08■■■□□ 2.25
AP003108.2-207ENST00000544880 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
AP003108.2-207ENST00000544880 OSCARQ8IYS5 282 aa28.94■■■□□ 2.22
AP003108.2-207ENST00000544880 TOPBP1Q92547 1522 aa28.91■■■□□ 2.22
AP003108.2-207ENST00000544880 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
AP003108.2-207ENST00000544880 ZNF608Q9ULD9 1512 aaPredicted RBP28.86■■■□□ 2.21
AP003108.2-207ENST00000544880 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
AP003108.2-207ENST00000544880 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
AP003108.2-207ENST00000544880 EIF4G3O43432 1585 aaKnown RBP28.67■■■□□ 2.18
AP003108.2-207ENST00000544880 TARBP1Q13395 1621 aaKnown RBP28.63■■■□□ 2.17
AP003108.2-207ENST00000544880 POLA1P09884 1462 aaPredicted RBP28.62■■■□□ 2.17
AP003108.2-207ENST00000544880 AQRO60306 1485 aaKnown RBP eCLIP28.6■■■□□ 2.175e-6■■□□□ 14.3
AP003108.2-207ENST00000544880 RAD54L2Q9Y4B4 1467 aa28.53■■■□□ 2.16
AP003108.2-207ENST00000544880 RIMBP3CA6NJZ7 1639 aa28.52■■■□□ 2.16
AP003108.2-207ENST00000544880 RIMBP3BA6NNM3 1639 aa28.52■■■□□ 2.16
AP003108.2-207ENST00000544880 RIMBP3Q9UFD9 1639 aa28.52■■■□□ 2.16
AP003108.2-207ENST00000544880 SOGA1O94964 1423 aa28.5■■■□□ 2.15
AP003108.2-207ENST00000544880 ARHGEF11O15085 1522 aa28.46■■■□□ 2.15
AP003108.2-207ENST00000544880 TDRD9Q8NDG6 1382 aaKnown RBP28.45■■■□□ 2.14
AP003108.2-207ENST00000544880 FGD5Q6ZNL6 1462 aa28.45■■■□□ 2.14
AP003108.2-207ENST00000544880 CUX1P39880 1505 aa28.43■■■□□ 2.14
AP003108.2-207ENST00000544880 CHD1O14646 1710 aa28.41■■■□□ 2.14
AP003108.2-207ENST00000544880 FBLN2P98095 1184 aa28.41■■■□□ 2.14
AP003108.2-207ENST00000544880 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
AP003108.2-207ENST00000544880 WDR97A6NE52 1622 aa28.33■■■□□ 2.13
AP003108.2-207ENST00000544880 SNAPC4Q5SXM2 1469 aa28.32■■■□□ 2.12
AP003108.2-207ENST00000544880 CYB5RLQ6IPT4 315 aa28.27■■■□□ 2.12
AP003108.2-207ENST00000544880 GRIN2BQ13224 1484 aa28.24■■■□□ 2.11
AP003108.2-207ENST00000544880 MAGI1Q96QZ7 1491 aaPredicted RBP28.24■■■□□ 2.11
AP003108.2-207ENST00000544880 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
AP003108.2-207ENST00000544880 ARAP1Q96P48 1450 aa28.2■■■□□ 2.1
AP003108.2-207ENST00000544880 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
AP003108.2-207ENST00000544880 GAPVD1Q14C86 1478 aa28.15■■■□□ 2.1
AP003108.2-207ENST00000544880 CLASP1Q7Z460 1538 aa28.14■■■□□ 2.1
AP003108.2-207ENST00000544880 ABCA10Q8WWZ4 1543 aa28.13■■■□□ 2.09
AP003108.2-207ENST00000544880 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
AP003108.2-207ENST00000544880 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
AP003108.2-207ENST00000544880 ABCA5Q8WWZ7 1642 aa28.06■■■□□ 2.08
AP003108.2-207ENST00000544880 WRNQ14191 1432 aaPredicted RBP eCLIP28.03■■■□□ 2.08
AP003108.2-207ENST00000544880 TOP2BQ02880 1626 aa27.96■■■□□ 2.07
AP003108.2-207ENST00000544880 BIVM-ERCC5R4GMW8 1640 aa27.94■■■□□ 2.06
AP003108.2-207ENST00000544880 TRHP20396 242 aaPredicted RBP27.94■■■□□ 2.06
AP003108.2-207ENST00000544880 GRIN2AQ12879 1464 aa27.88■■■□□ 2.05
AP003108.2-207ENST00000544880 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
AP003108.2-207ENST00000544880 FHAD1B1AJZ9 1412 aa27.8■■■□□ 2.04
AP003108.2-207ENST00000544880 NUP160Q12769 1436 aa27.79■■■□□ 2.04
AP003108.2-207ENST00000544880 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
AP003108.2-207ENST00000544880 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
AP003108.2-207ENST00000544880 ERCC6L2Q5T890 1561 aa27.71■■■□□ 2.03
AP003108.2-207ENST00000544880 SHROOM2Q13796 1616 aa27.62■■■□□ 2.01
AP003108.2-207ENST00000544880 PRG4Q92954 1404 aaPredicted RBP27.52■■■□□ 2
AP003108.2-207ENST00000544880 JPH4Q96JJ6 628 aa27.51■■□□□ 1.99
AP003108.2-207ENST00000544880 RUSC2Q8N2Y8 1516 aa27.46■■□□□ 1.99
AP003108.2-207ENST00000544880 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms