RNA–Protein interactions for RNA: ENST00000406902.5

GRAMD4-202, Transcript of GRAM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRAMD4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-202ENST00000406902 NISCHQ9Y2I1 1504 aa24.57■■□□□ 1.52
GRAMD4-202ENST00000406902 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
GRAMD4-202ENST00000406902 PELP1Q8IZL8 1130 aaKnown RBP23.76■■□□□ 1.39
GRAMD4-202ENST00000406902 MYT1Q01538 1121 aa23.59■■□□□ 1.37
GRAMD4-202ENST00000406902 CENPBP07199 599 aaPredicted RBP22.19■■□□□ 1.14
GRAMD4-202ENST00000406902 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
GRAMD4-202ENST00000406902 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
GRAMD4-202ENST00000406902 HRCP23327 699 aa21.9■■□□□ 1.1
GRAMD4-202ENST00000406902 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
GRAMD4-202ENST00000406902 ERICH6Q7L0X2 663 aa21.82■■□□□ 1.08
GRAMD4-202ENST00000406902 ZEB1P37275 1124 aaPredicted RBP21.8■■□□□ 1.08
GRAMD4-202ENST00000406902 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
GRAMD4-202ENST00000406902 SHROOM4Q9ULL8 1493 aa21.69■■□□□ 1.06
GRAMD4-202ENST00000406902 CCER1Q8TC90 406 aaPredicted RBP21.56■■□□□ 1.04
GRAMD4-202ENST00000406902 APLP2Q06481 763 aa21.48■■□□□ 1.03
GRAMD4-202ENST00000406902 EHMT2Q96KQ7 1210 aa21.39■■□□□ 1.02
GRAMD4-202ENST00000406902 PPARGC1BQ86YN6 1023 aaKnown RBP21.32■■□□□ 1
GRAMD4-202ENST00000406902 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
GRAMD4-202ENST00000406902 NEFLP07196 543 aa21.04■□□□□ 0.96
GRAMD4-202ENST00000406902 GTF3C3Q9Y5Q9 886 aa21.04■□□□□ 0.96
GRAMD4-202ENST00000406902 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
GRAMD4-202ENST00000406902 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
GRAMD4-202ENST00000406902 ACIN1Q9UKV3 1341 aaKnown RBP20.8■□□□□ 0.92
GRAMD4-202ENST00000406902 ABCC9O60706 1549 aa20.75■□□□□ 0.91
GRAMD4-202ENST00000406902 ATP1B4Q9UN42 357 aaPredicted RBP20.69■□□□□ 0.9
GRAMD4-202ENST00000406902 SCAF1Q9H7N4 1312 aaKnown RBP20.69■□□□□ 0.9
GRAMD4-202ENST00000406902 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
GRAMD4-202ENST00000406902 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
GRAMD4-202ENST00000406902 RTL5Q5HYW3 569 aaPredicted RBP20.61■□□□□ 0.89
GRAMD4-202ENST00000406902 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.89
GRAMD4-202ENST00000406902 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
GRAMD4-202ENST00000406902 ZCCHC6Q5VYS8 1495 aaKnown RBP20.51■□□□□ 0.87
GRAMD4-202ENST00000406902 BCL11AQ9H165 835 aa20.49■□□□□ 0.87
GRAMD4-202ENST00000406902 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
GRAMD4-202ENST00000406902 LOC105371045A0A1W2PR82 267 aa20.31■□□□□ 0.84
GRAMD4-202ENST00000406902 NEUROD1Q13562 356 aa20.31■□□□□ 0.84
GRAMD4-202ENST00000406902 MYT1LQ9UL68 1186 aa20.29■□□□□ 0.84
GRAMD4-202ENST00000406902 DAXXQ9UER7 740 aaPredicted RBP20.28■□□□□ 0.84
GRAMD4-202ENST00000406902 ANP32EQ9BTT0 268 aa20.24■□□□□ 0.83
GRAMD4-202ENST00000406902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
GRAMD4-202ENST00000406902 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
GRAMD4-202ENST00000406902 GLIPR1L2Q4G1C9 344 aa20.23■□□□□ 0.83
GRAMD4-202ENST00000406902 BCANQ96GW7 911 aa20.19■□□□□ 0.82
GRAMD4-202ENST00000406902 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
GRAMD4-202ENST00000406902 CLSPNQ9HAW4 1339 aa20.06■□□□□ 0.8
GRAMD4-202ENST00000406902 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
GRAMD4-202ENST00000406902 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
GRAMD4-202ENST00000406902 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
GRAMD4-202ENST00000406902 SCRIBQ14160 1630 aa19.94■□□□□ 0.78
GRAMD4-202ENST00000406902 NACADO15069 1562 aa19.91■□□□□ 0.78
GRAMD4-202ENST00000406902 RB1CC1Q8TDY2 1594 aa19.89■□□□□ 0.77
GRAMD4-202ENST00000406902 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
GRAMD4-202ENST00000406902 ANP32AP39687 249 aaKnown RBP19.72■□□□□ 0.75
GRAMD4-202ENST00000406902 NBR1Q14596 966 aa19.68■□□□□ 0.74
GRAMD4-202ENST00000406902 PRKCSHP14314 528 aaPredicted RBP19.68■□□□□ 0.74
GRAMD4-202ENST00000406902 FKBP8Q14318 412 aa19.67■□□□□ 0.74
GRAMD4-202ENST00000406902 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
GRAMD4-202ENST00000406902 ITGAEP38570 1179 aa19.65■□□□□ 0.74
GRAMD4-202ENST00000406902 FBLN2P98095 1184 aa19.63■□□□□ 0.73
GRAMD4-202ENST00000406902 CSRNP3Q8WYN3 585 aa19.62■□□□□ 0.73
GRAMD4-202ENST00000406902 POLR3GLQ9BT43 218 aa19.48■□□□□ 0.71
GRAMD4-202ENST00000406902 RTN4Q9NQC3 1192 aaKnown RBP19.47■□□□□ 0.71
GRAMD4-202ENST00000406902 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
GRAMD4-202ENST00000406902 SLC4A1APQ9BWU0 796 aaKnown RBP19.41■□□□□ 0.7
GRAMD4-202ENST00000406902 DEKP35659 375 aaKnown RBP19.4■□□□□ 0.7
GRAMD4-202ENST00000406902 NPM2Q86SE8 214 aaKnown RBP19.38■□□□□ 0.69
GRAMD4-202ENST00000406902 ANP32CO43423 234 aa19.36■□□□□ 0.69
GRAMD4-202ENST00000406902 MIER1Q8N108 512 aa19.36■□□□□ 0.69
GRAMD4-202ENST00000406902 NPM1P06748 294 aaKnown RBP eCLIP19.34■□□□□ 0.69
GRAMD4-202ENST00000406902 FAM50AQ14320 339 aaKnown RBP19.31■□□□□ 0.68
GRAMD4-202ENST00000406902 ESF1Q9H501 851 aaKnown RBP19.29■□□□□ 0.68
GRAMD4-202ENST00000406902 TRIM52Q96A61 297 aa19.27■□□□□ 0.68
GRAMD4-202ENST00000406902 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.68
GRAMD4-202ENST00000406902 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.26■□□□□ 0.67
GRAMD4-202ENST00000406902 ERICH6BQ5W0A0 696 aa19.25■□□□□ 0.67
GRAMD4-202ENST00000406902 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
GRAMD4-202ENST00000406902 NEFMP07197 916 aa19.21■□□□□ 0.67
GRAMD4-202ENST00000406902 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
GRAMD4-202ENST00000406902 CNGB1Q14028 1251 aaPredicted RBP19.19■□□□□ 0.66
GRAMD4-202ENST00000406902 CCDC136Q96JN2 1154 aa19.17■□□□□ 0.66
GRAMD4-202ENST00000406902 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
GRAMD4-202ENST00000406902 RBM19Q9Y4C8 960 aaKnown RBP19.16■□□□□ 0.66
GRAMD4-202ENST00000406902 ANP32BQ92688 251 aaKnown RBP19.12■□□□□ 0.65
GRAMD4-202ENST00000406902 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
GRAMD4-202ENST00000406902 TNNT2P45379 298 aaPredicted RBP19.1■□□□□ 0.65
GRAMD4-202ENST00000406902 NOP58Q9Y2X3 529 aaKnown RBP19.08■□□□□ 0.64
GRAMD4-202ENST00000406902 NAP1L5Q96NT1 182 aaPredicted RBP19.06■□□□□ 0.64
GRAMD4-202ENST00000406902 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
GRAMD4-202ENST00000406902 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
GRAMD4-202ENST00000406902 HNRNPUQ00839 825 aaKnown RBP eCLIP19■□□□□ 0.63
GRAMD4-202ENST00000406902 PPM1GO15355 546 aaPredicted RBP19■□□□□ 0.63
GRAMD4-202ENST00000406902 ARXQ96QS3 562 aa19■□□□□ 0.63
GRAMD4-202ENST00000406902 ANO8Q9HCE9 1232 aaPredicted RBP18.96■□□□□ 0.63
GRAMD4-202ENST00000406902 P3H3Q8IVL6 736 aa18.94■□□□□ 0.62
GRAMD4-202ENST00000406902 IRX6P78412 446 aaPredicted RBP18.94■□□□□ 0.62
GRAMD4-202ENST00000406902 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
GRAMD4-202ENST00000406902 STAG3Q9UJ98 1225 aa18.94■□□□□ 0.62
GRAMD4-202ENST00000406902 PKNOX2Q96KN3 472 aa18.94■□□□□ 0.62
GRAMD4-202ENST00000406902 VSIG10Q8N0Z9 540 aa18.93■□□□□ 0.62
GRAMD4-202ENST00000406902 ZNF326Q5BKZ1 582 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms