RNA–Protein interactions for RNA: ENST00000298628.6

SARDH-201, Transcript of sarcosine dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene SARDH, Length 1,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARDH-201ENST00000298628 NISCHQ9Y2I1 1504 aa46.05■■■■■ 4.96
SARDH-201ENST00000298628 CCDC180Q9P1Z9 1646 aa40.51■■■■■ 4.08
SARDH-201ENST00000298628 ABCC9O60706 1549 aa39.18■■■■□ 3.86
SARDH-201ENST00000298628 DCAF8L2P0C7V8 631 aa38.52■■■■□ 3.76
SARDH-201ENST00000298628 ZCCHC6Q5VYS8 1495 aaKnown RBP38.47■■■■□ 3.75
SARDH-201ENST00000298628 DCAF1Q9Y4B6 1507 aa38.06■■■■□ 3.68
SARDH-201ENST00000298628 NACADO15069 1562 aa38.01■■■■□ 3.68
SARDH-201ENST00000298628 MYO15BQ96JP2 1530 aa37.95■■■■□ 3.67
SARDH-201ENST00000298628 RB1CC1Q8TDY2 1594 aa37.91■■■■□ 3.66
SARDH-201ENST00000298628 SCRIBQ14160 1630 aa37.16■■■■□ 3.54
SARDH-201ENST00000298628 SHROOM4Q9ULL8 1493 aa37.01■■■■□ 3.52
SARDH-201ENST00000298628 UNC13AQ9UPW8 1703 aa36.91■■■■□ 3.5
SARDH-201ENST00000298628 PABPN1Q86U42 306 aaKnown RBP eCLIP36.84■■■■□ 3.49
SARDH-201ENST00000298628 BICRAQ9NZM4 1560 aa36.67■■■■□ 3.46
SARDH-201ENST00000298628 CECR2Q9BXF3 1484 aa35.84■■■■□ 3.33
SARDH-201ENST00000298628 EIF4G1Q04637 1599 aaKnown RBP35.69■■■■□ 3.3
SARDH-201ENST00000298628 BAZ1AQ9NRL2 1556 aaPredicted RBP35.65■■■■□ 3.3
SARDH-201ENST00000298628 SMARCA4P51532 1647 aa35.55■■■■□ 3.28
SARDH-201ENST00000298628 MROH2BQ7Z745 1585 aa35.52■■■■□ 3.28
SARDH-201ENST00000298628 RSF1Q96T23 1441 aaPredicted RBP35.39■■■■□ 3.26
SARDH-201ENST00000298628 CC2D2AQ9P2K1 1620 aa35.38■■■■□ 3.25
SARDH-201ENST00000298628 DNAJC5BQ9UF47 199 aa35.35■■■■□ 3.25
SARDH-201ENST00000298628 SUPT5HO00267 1087 aaKnown RBP35.24■■■■□ 3.23
SARDH-201ENST00000298628 ATAD2BQ9ULI0 1458 aa35.24■■■■□ 3.23
SARDH-201ENST00000298628 SMARCA2P51531 1590 aa35.2■■■■□ 3.23
SARDH-201ENST00000298628 WIZO95785 1651 aa35.15■■■■□ 3.22
SARDH-201ENST00000298628 PEG3Q9GZU2 1588 aa35.13■■■■□ 3.22
SARDH-201ENST00000298628 NCAPD3P42695 1498 aa35.1■■■■□ 3.21
SARDH-201ENST00000298628 BAZ1BQ9UIG0 1483 aaKnown RBP35.02■■■■□ 3.2
SARDH-201ENST00000298628 HMGXB3Q12766 1538 aa34.93■■■■□ 3.18
SARDH-201ENST00000298628 TOP2AP11388 1531 aaKnown RBP34.81■■■■□ 3.16
SARDH-201ENST00000298628 CCDC88BA6NC98 1476 aa34.46■■■■□ 3.11
SARDH-201ENST00000298628 CADPSQ9ULU8 1353 aa34.18■■■■□ 3.06
SARDH-201ENST00000298628 NESP48681 1621 aa34.08■■■■□ 3.05
SARDH-201ENST00000298628 CFTRP13569 1480 aa34.06■■■■□ 3.04
SARDH-201ENST00000298628 LAMC3Q9Y6N6 1575 aa34.03■■■■□ 3.04
SARDH-201ENST00000298628 PDS5BQ9NTI5 1447 aa33.88■■■■□ 3.01
SARDH-201ENST00000298628 FANCD2Q9BXW9 1451 aa33.77■■■■□ 3
SARDH-201ENST00000298628 ERCC6Q03468 1493 aa33.76■■■□□ 2.99
SARDH-201ENST00000298628 PRDM2Q13029 1718 aa33.69■■■□□ 2.98
SARDH-201ENST00000298628 CEP164Q9UPV0 1460 aa33.65■■■□□ 2.98
SARDH-201ENST00000298628 KIF21AQ7Z4S6 1674 aa33.59■■■□□ 2.97
SARDH-201ENST00000298628 MRC2Q9UBG0 1479 aa33.44■■■□□ 2.94
SARDH-201ENST00000298628 ABCC8Q09428 1581 aa33.41■■■□□ 2.94
SARDH-201ENST00000298628 WRNQ14191 1432 aaPredicted RBP eCLIP33.39■■■□□ 2.94
SARDH-201ENST00000298628 URB2Q14146 1524 aaKnown RBP33.34■■■□□ 2.93
SARDH-201ENST00000298628 THOC2Q8NI27 1593 aaKnown RBP33.29■■■□□ 2.92
SARDH-201ENST00000298628 TOPBP1Q92547 1522 aa33.27■■■□□ 2.92
SARDH-201ENST00000298628 CUX1P39880 1505 aa33.27■■■□□ 2.92
SARDH-201ENST00000298628 DNMBPQ6XZF7 1577 aa33.26■■■□□ 2.91
SARDH-201ENST00000298628 WDR62O43379 1518 aa33.24■■■□□ 2.91
SARDH-201ENST00000298628 TRIM41Q8WV44 630 aa33.23■■■□□ 2.91
SARDH-201ENST00000298628 CHIC1Q5VXU3 224 aa33.2■■■□□ 2.91
SARDH-201ENST00000298628 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
SARDH-201ENST00000298628 TOP2BQ02880 1626 aa33.14■■■□□ 2.9
SARDH-201ENST00000298628 BIVM-ERCC5R4GMW8 1640 aa33.08■■■□□ 2.89
SARDH-201ENST00000298628 FGD5Q6ZNL6 1462 aa33.08■■■□□ 2.89
SARDH-201ENST00000298628 POLA1P09884 1462 aaPredicted RBP33.04■■■□□ 2.88
SARDH-201ENST00000298628 CUX2O14529 1486 aa33.03■■■□□ 2.88
SARDH-201ENST00000298628 SOGA1O94964 1423 aa33■■■□□ 2.87
SARDH-201ENST00000298628 RAD54L2Q9Y4B4 1467 aa32.94■■■□□ 2.86
SARDH-201ENST00000298628 IFT140Q96RY7 1462 aa32.91■■■□□ 2.86
SARDH-201ENST00000298628 TARBP1Q13395 1621 aaKnown RBP32.79■■■□□ 2.84
SARDH-201ENST00000298628 ABCA10Q8WWZ4 1543 aa32.76■■■□□ 2.83
SARDH-201ENST00000298628 TDRD9Q8NDG6 1382 aaKnown RBP32.75■■■□□ 2.83
SARDH-201ENST00000298628 ZNF608Q9ULD9 1512 aaPredicted RBP32.7■■■□□ 2.83
SARDH-201ENST00000298628 AQRO60306 1485 aaKnown RBP eCLIP32.67■■■□□ 2.825e-8■■■■□ 24.9
SARDH-201ENST00000298628 KIF27Q86VH2 1401 aa32.65■■■□□ 2.82
SARDH-201ENST00000298628 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
SARDH-201ENST00000298628 GAPVD1Q14C86 1478 aa32.59■■■□□ 2.81
SARDH-201ENST00000298628 FAM9AQ8IZU1 332 aaPredicted RBP32.58■■■□□ 2.81
SARDH-201ENST00000298628 RUSC2Q8N2Y8 1516 aa32.54■■■□□ 2.8
SARDH-201ENST00000298628 EIF4G3O43432 1585 aaKnown RBP32.54■■■□□ 2.8
SARDH-201ENST00000298628 ABCA5Q8WWZ7 1642 aa32.5■■■□□ 2.79
SARDH-201ENST00000298628 GRIN2BQ13224 1484 aa32.48■■■□□ 2.79
SARDH-201ENST00000298628 EEA1Q15075 1411 aa32.46■■■□□ 2.79
SARDH-201ENST00000298628 IGF1RP08069 1367 aa32.42■■■□□ 2.78
SARDH-201ENST00000298628 CSRNP3Q8WYN3 585 aa32.42■■■□□ 2.78
SARDH-201ENST00000298628 ERICH3Q5RHP9 1530 aa32.37■■■□□ 2.77
SARDH-201ENST00000298628 PBRM1Q86U86 1689 aa32.35■■■□□ 2.77
SARDH-201ENST00000298628 SNAPC4Q5SXM2 1469 aa32.34■■■□□ 2.77
SARDH-201ENST00000298628 FBLN2P98095 1184 aa32.29■■■□□ 2.76
SARDH-201ENST00000298628 MAGI1Q96QZ7 1491 aaPredicted RBP32.29■■■□□ 2.76
SARDH-201ENST00000298628 CARMIL1Q5VZK9 1371 aa32.28■■■□□ 2.76
SARDH-201ENST00000298628 CHMP7Q8WUX9 453 aaPredicted RBP32.26■■■□□ 2.75
SARDH-201ENST00000298628 FHAD1B1AJZ9 1412 aa32.24■■■□□ 2.75
SARDH-201ENST00000298628 CUL7Q14999 1698 aa32.19■■■□□ 2.74
SARDH-201ENST00000298628 SYNJ2O15056 1496 aa32.17■■■□□ 2.74
SARDH-201ENST00000298628 ADAMTS12P58397 1594 aa32.17■■■□□ 2.74
SARDH-201ENST00000298628 EHMT2Q96KQ7 1210 aa32.16■■■□□ 2.74
SARDH-201ENST00000298628 PRXQ9BXM0 1461 aa32.13■■■□□ 2.73
SARDH-201ENST00000298628 RAPGEF2Q9Y4G8 1499 aa32.12■■■□□ 2.73
SARDH-201ENST00000298628 GRIN2AQ12879 1464 aa32.05■■■□□ 2.72
SARDH-201ENST00000298628 KIF21BO75037 1637 aa31.99■■■□□ 2.71
SARDH-201ENST00000298628 UBTFP17480 764 aaKnown RBP31.98■■■□□ 2.71
SARDH-201ENST00000298628 CHD1O14646 1710 aa31.97■■■□□ 2.71
SARDH-201ENST00000298628 OSCARQ8IYS5 282 aa31.96■■■□□ 2.71
SARDH-201ENST00000298628 GOLGA3Q08378 1498 aa31.95■■■□□ 2.71
SARDH-201ENST00000298628 LOC105371045A0A1W2PR82 267 aa31.92■■■□□ 2.7
SARDH-201ENST00000298628 NUP160Q12769 1436 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms