RNA–Protein interactions for RNA: ENST00000427237.6

SARDH-206, Transcript of sarcosine dehydrogenase, humanhuman

TSL 2

Gene SARDH, Length 1,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARDH-206ENST00000427237 NISCHQ9Y2I1 1504 aa38.47■■■■□ 3.75
SARDH-206ENST00000427237 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
SARDH-206ENST00000427237 ZCCHC6Q5VYS8 1495 aaKnown RBP32.48■■■□□ 2.79
SARDH-206ENST00000427237 SHROOM4Q9ULL8 1493 aa32.14■■■□□ 2.74
SARDH-206ENST00000427237 DCAF1Q9Y4B6 1507 aa31.74■■■□□ 2.67
SARDH-206ENST00000427237 DCAF8L2P0C7V8 631 aa31.64■■■□□ 2.66
SARDH-206ENST00000427237 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
SARDH-206ENST00000427237 MYO15BQ96JP2 1530 aa31.01■■■□□ 2.56
SARDH-206ENST00000427237 ABCC9O60706 1549 aa30.77■■■□□ 2.52
SARDH-206ENST00000427237 SCRIBQ14160 1630 aa30.66■■■□□ 2.5
SARDH-206ENST00000427237 NACADO15069 1562 aa30.62■■■□□ 2.49
SARDH-206ENST00000427237 CHIC1Q5VXU3 224 aa30.39■■■□□ 2.46
SARDH-206ENST00000427237 RSF1Q96T23 1441 aaPredicted RBP30.21■■■□□ 2.43
SARDH-206ENST00000427237 RB1CC1Q8TDY2 1594 aa30.17■■■□□ 2.42
SARDH-206ENST00000427237 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
SARDH-206ENST00000427237 MROH2BQ7Z745 1585 aa29.8■■■□□ 2.36
SARDH-206ENST00000427237 UNC13AQ9UPW8 1703 aa29.63■■■□□ 2.33
SARDH-206ENST00000427237 BAZ1AQ9NRL2 1556 aaPredicted RBP29.61■■■□□ 2.33
SARDH-206ENST00000427237 WIZO95785 1651 aa29.6■■■□□ 2.33
SARDH-206ENST00000427237 SMARCA4P51532 1647 aa29.39■■■□□ 2.3
SARDH-206ENST00000427237 TRIM41Q8WV44 630 aa29.34■■■□□ 2.29
SARDH-206ENST00000427237 LOC105371045A0A1W2PR82 267 aa29.33■■■□□ 2.29
SARDH-206ENST00000427237 BICRAQ9NZM4 1560 aa29.3■■■□□ 2.28
SARDH-206ENST00000427237 TOP2AP11388 1531 aaKnown RBP29.26■■■□□ 2.27
SARDH-206ENST00000427237 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
SARDH-206ENST00000427237 PABPN1Q86U42 306 aaKnown RBP eCLIP29.13■■■□□ 2.252e-7■□□□□ 9.9
SARDH-206ENST00000427237 SMARCA2P51531 1590 aa29.04■■■□□ 2.24
SARDH-206ENST00000427237 CCDC88BA6NC98 1476 aa29.03■■■□□ 2.24
SARDH-206ENST00000427237 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.23
SARDH-206ENST00000427237 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
SARDH-206ENST00000427237 PCGF6Q9BYE7 350 aa28.89■■■□□ 2.22
SARDH-206ENST00000427237 ABCC8Q09428 1581 aa28.73■■■□□ 2.19
SARDH-206ENST00000427237 HRCP23327 699 aa28.72■■■□□ 2.19
SARDH-206ENST00000427237 ATAD2BQ9ULI0 1458 aa28.71■■■□□ 2.19
SARDH-206ENST00000427237 TRIM26Q12899 539 aaPredicted RBP28.61■■■□□ 2.17
SARDH-206ENST00000427237 BAZ1BQ9UIG0 1483 aaKnown RBP28.6■■■□□ 2.17
SARDH-206ENST00000427237 EHMT2Q96KQ7 1210 aa28.53■■■□□ 2.16
SARDH-206ENST00000427237 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
SARDH-206ENST00000427237 EEA1Q15075 1411 aa28.39■■■□□ 2.14
SARDH-206ENST00000427237 SOGA1O94964 1423 aa28.38■■■□□ 2.13
SARDH-206ENST00000427237 HMGXB3Q12766 1538 aa28.3■■■□□ 2.12
SARDH-206ENST00000427237 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
SARDH-206ENST00000427237 SYNJ1O43426 1573 aa28.26■■■□□ 2.11
SARDH-206ENST00000427237 RUSC2Q8N2Y8 1516 aa28.22■■■□□ 2.11
SARDH-206ENST00000427237 CSRNP3Q8WYN3 585 aa28.22■■■□□ 2.11
SARDH-206ENST00000427237 TNIKQ9UKE5 1360 aa28.16■■■□□ 2.1
SARDH-206ENST00000427237 CEP162Q5TB80 1403 aa28.11■■■□□ 2.09
SARDH-206ENST00000427237 GOLGA3Q08378 1498 aa28.08■■■□□ 2.09
SARDH-206ENST00000427237 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
SARDH-206ENST00000427237 PPARGC1BQ86YN6 1023 aaKnown RBP27.99■■■□□ 2.07
SARDH-206ENST00000427237 KIF21BO75037 1637 aa27.99■■■□□ 2.07
SARDH-206ENST00000427237 CEP164Q9UPV0 1460 aa27.99■■■□□ 2.07
SARDH-206ENST00000427237 BIVM-ERCC5R4GMW8 1640 aa27.98■■■□□ 2.07
SARDH-206ENST00000427237 UBTFP17480 764 aaKnown RBP27.97■■■□□ 2.07
SARDH-206ENST00000427237 CFTRP13569 1480 aa27.91■■■□□ 2.06
SARDH-206ENST00000427237 ZEB1P37275 1124 aaPredicted RBP27.87■■■□□ 2.05
SARDH-206ENST00000427237 CUX1P39880 1505 aa27.8■■■□□ 2.04
SARDH-206ENST00000427237 CC2D2AQ9P2K1 1620 aa27.79■■■□□ 2.04
SARDH-206ENST00000427237 PRDM2Q13029 1718 aa27.76■■■□□ 2.03
SARDH-206ENST00000427237 RAPGEF2Q9Y4G8 1499 aa27.74■■■□□ 2.03
SARDH-206ENST00000427237 CLIP1P30622 1438 aa27.69■■■□□ 2.02
SARDH-206ENST00000427237 CADPSQ9ULU8 1353 aa27.65■■■□□ 2.02
SARDH-206ENST00000427237 ERICH3Q5RHP9 1530 aa27.64■■■□□ 2.02
SARDH-206ENST00000427237 PRXQ9BXM0 1461 aa27.62■■■□□ 2.01
SARDH-206ENST00000427237 KIF27Q86VH2 1401 aa27.59■■■□□ 2.01
SARDH-206ENST00000427237 VPS8Q8N3P4 1428 aa27.55■■■□□ 2
SARDH-206ENST00000427237 TTBK1Q5TCY1 1321 aaPredicted RBP27.53■■■□□ 2
SARDH-206ENST00000427237 DNAJC5BQ9UF47 199 aa27.44■■□□□ 1.98
SARDH-206ENST00000427237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.4■■□□□ 1.98
SARDH-206ENST00000427237 FANCD2Q9BXW9 1451 aa27.37■■□□□ 1.97
SARDH-206ENST00000427237 CCER1Q8TC90 406 aaPredicted RBP27.37■■□□□ 1.97
SARDH-206ENST00000427237 CUX2O14529 1486 aa27.35■■□□□ 1.97
SARDH-206ENST00000427237 FGD5Q6ZNL6 1462 aa27.35■■□□□ 1.97
SARDH-206ENST00000427237 RANGAP1P46060 587 aaPredicted RBP27.34■■□□□ 1.97
SARDH-206ENST00000427237 APLP2Q06481 763 aa27.32■■□□□ 1.96
SARDH-206ENST00000427237 ARAP1Q96P48 1450 aa27.31■■□□□ 1.96
SARDH-206ENST00000427237 IGF1RP08069 1367 aa27.28■■□□□ 1.96
SARDH-206ENST00000427237 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
SARDH-206ENST00000427237 NESP48681 1621 aa27.2■■□□□ 1.94
SARDH-206ENST00000427237 LAMC3Q9Y6N6 1575 aa27.17■■□□□ 1.94
SARDH-206ENST00000427237 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
SARDH-206ENST00000427237 CARMIL1Q5VZK9 1371 aa27.16■■□□□ 1.94
SARDH-206ENST00000427237 ARHGAP35Q9NRY4 1499 aa27.14■■□□□ 1.94
SARDH-206ENST00000427237 ABCA10Q8WWZ4 1543 aa27.11■■□□□ 1.93
SARDH-206ENST00000427237 POLA1P09884 1462 aaPredicted RBP27.1■■□□□ 1.93
SARDH-206ENST00000427237 RAD54L2Q9Y4B4 1467 aa27.06■■□□□ 1.92
SARDH-206ENST00000427237 HNRNPUL2Q1KMD3 747 aaKnown RBP27.03■■□□□ 1.92
SARDH-206ENST00000427237 URB2Q14146 1524 aaKnown RBP26.98■■□□□ 1.91
SARDH-206ENST00000427237 KANK4Q5T7N3 995 aaPredicted RBP26.97■■□□□ 1.91
SARDH-206ENST00000427237 PDS5BQ9NTI5 1447 aa26.96■■□□□ 1.91
SARDH-206ENST00000427237 CUL7Q14999 1698 aa26.93■■□□□ 1.9
SARDH-206ENST00000427237 WDR97A6NE52 1622 aa26.92■■□□□ 1.9
SARDH-206ENST00000427237 MAP3K1Q13233 1512 aa26.87■■□□□ 1.89
SARDH-206ENST00000427237 RRBP1Q9P2E9 1410 aaKnown RBP26.86■■□□□ 1.89
SARDH-206ENST00000427237 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
SARDH-206ENST00000427237 TIAM1Q13009 1591 aa26.81■■□□□ 1.88
SARDH-206ENST00000427237 ABCA5Q8WWZ7 1642 aa26.81■■□□□ 1.88
SARDH-206ENST00000427237 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
SARDH-206ENST00000427237 EFCAB5A4FU69 1503 aa26.78■■□□□ 1.88
SARDH-206ENST00000427237 CTTNBP2Q8WZ74 1663 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms