RNA–Protein interactions for RNA: ENST00000541135.5

AP003108.2-202, humanhuman

APPRIS P1 TSL 4

Gene AP003108.2, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-202ENST00000541135 NISCHQ9Y2I1 1504 aa48.26■■■■■ 5.32
AP003108.2-202ENST00000541135 CCDC180Q9P1Z9 1646 aa43.39■■■■■ 4.54
AP003108.2-202ENST00000541135 ABCC9O60706 1549 aa42.7■■■■■ 4.43
AP003108.2-202ENST00000541135 RB1CC1Q8TDY2 1594 aa40.99■■■■■ 4.15
AP003108.2-202ENST00000541135 NACADO15069 1562 aa40.79■■■■■ 4.12
AP003108.2-202ENST00000541135 MYO15BQ96JP2 1530 aa40.44■■■■■ 4.06
AP003108.2-202ENST00000541135 ZCCHC6Q5VYS8 1495 aaKnown RBP40.16■■■■■ 4.02
AP003108.2-202ENST00000541135 UNC13AQ9UPW8 1703 aa40.15■■■■■ 4.02
AP003108.2-202ENST00000541135 DCAF8L2P0C7V8 631 aa40.09■■■■■ 4.01
AP003108.2-202ENST00000541135 DCAF1Q9Y4B6 1507 aa40.02■■■■■ 4
AP003108.2-202ENST00000541135 BICRAQ9NZM4 1560 aa39.77■■■■□ 3.96
AP003108.2-202ENST00000541135 PABPN1Q86U42 306 aaKnown RBP eCLIP39.61■■■■□ 3.93
AP003108.2-202ENST00000541135 DNAJC5BQ9UF47 199 aa39.58■■■■□ 3.93
AP003108.2-202ENST00000541135 SHROOM4Q9ULL8 1493 aa39.44■■■■□ 3.9
AP003108.2-202ENST00000541135 SCRIBQ14160 1630 aa39.34■■■■□ 3.89
AP003108.2-202ENST00000541135 EIF4G1Q04637 1599 aaKnown RBP38.76■■■■□ 3.8
AP003108.2-202ENST00000541135 CC2D2AQ9P2K1 1620 aa38.72■■■■□ 3.79
AP003108.2-202ENST00000541135 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
AP003108.2-202ENST00000541135 SMARCA4P51532 1647 aa37.65■■■■□ 3.62
AP003108.2-202ENST00000541135 NCAPD3P42695 1498 aa37.58■■■■□ 3.61
AP003108.2-202ENST00000541135 SMARCA2P51531 1590 aa37.5■■■■□ 3.59
AP003108.2-202ENST00000541135 ATAD2BQ9ULI0 1458 aa37.49■■■■□ 3.59
AP003108.2-202ENST00000541135 BAZ1AQ9NRL2 1556 aaPredicted RBP37.49■■■■□ 3.59
AP003108.2-202ENST00000541135 HMGXB3Q12766 1538 aa37.48■■■■□ 3.59
AP003108.2-202ENST00000541135 PEG3Q9GZU2 1588 aa37.36■■■■□ 3.57
AP003108.2-202ENST00000541135 BAZ1BQ9UIG0 1483 aaKnown RBP37.16■■■■□ 3.54
AP003108.2-202ENST00000541135 MROH2BQ7Z745 1585 aa37.14■■■■□ 3.54
AP003108.2-202ENST00000541135 ERCC6Q03468 1493 aa36.87■■■■□ 3.49
AP003108.2-202ENST00000541135 CUX2O14529 1486 aa36.83■■■■□ 3.49
AP003108.2-202ENST00000541135 NESP48681 1621 aa36.79■■■■□ 3.48
AP003108.2-202ENST00000541135 LAMC3Q9Y6N6 1575 aa36.78■■■■□ 3.48
AP003108.2-202ENST00000541135 WIZO95785 1651 aa36.74■■■■□ 3.47
AP003108.2-202ENST00000541135 THOC2Q8NI27 1593 aaKnown RBP36.59■■■■□ 3.45
AP003108.2-202ENST00000541135 KIF21AQ7Z4S6 1674 aa36.51■■■■□ 3.44
AP003108.2-202ENST00000541135 RSF1Q96T23 1441 aaPredicted RBP36.44■■■■□ 3.42
AP003108.2-202ENST00000541135 PDS5BQ9NTI5 1447 aa36.4■■■■□ 3.42
AP003108.2-202ENST00000541135 TOP2AP11388 1531 aaKnown RBP36.39■■■■□ 3.42
AP003108.2-202ENST00000541135 CADPSQ9ULU8 1353 aa36.37■■■■□ 3.41
AP003108.2-202ENST00000541135 DNAJC5Q9H3Z4 198 aa36.16■■■■□ 3.38
AP003108.2-202ENST00000541135 MRC2Q9UBG0 1479 aa36.14■■■■□ 3.38
AP003108.2-202ENST00000541135 WDR62O43379 1518 aa36.13■■■■□ 3.37
AP003108.2-202ENST00000541135 CFTRP13569 1480 aa36.11■■■■□ 3.37
AP003108.2-202ENST00000541135 CEP164Q9UPV0 1460 aa36.06■■■■□ 3.36
AP003108.2-202ENST00000541135 PRDM2Q13029 1718 aa36.04■■■■□ 3.36
AP003108.2-202ENST00000541135 FANCD2Q9BXW9 1451 aa36■■■■□ 3.35
AP003108.2-202ENST00000541135 CCDC88BA6NC98 1476 aa35.81■■■■□ 3.32
AP003108.2-202ENST00000541135 URB2Q14146 1524 aaKnown RBP35.71■■■■□ 3.31
AP003108.2-202ENST00000541135 TOPBP1Q92547 1522 aa35.4■■■■□ 3.26
AP003108.2-202ENST00000541135 DNMBPQ6XZF7 1577 aa35.38■■■■□ 3.25
AP003108.2-202ENST00000541135 ABCC8Q09428 1581 aa35.36■■■■□ 3.25
AP003108.2-202ENST00000541135 IFT140Q96RY7 1462 aa35.32■■■■□ 3.24
AP003108.2-202ENST00000541135 EIF4G3O43432 1585 aaKnown RBP35.16■■■■□ 3.22
AP003108.2-202ENST00000541135 ZNF608Q9ULD9 1512 aaPredicted RBP35.16■■■■□ 3.22
AP003108.2-202ENST00000541135 TARBP1Q13395 1621 aaKnown RBP35.13■■■■□ 3.21
AP003108.2-202ENST00000541135 POLA1P09884 1462 aaPredicted RBP35.05■■■■□ 3.2
AP003108.2-202ENST00000541135 WDR97A6NE52 1622 aa34.94■■■■□ 3.18
AP003108.2-202ENST00000541135 OSCARQ8IYS5 282 aa34.91■■■■□ 3.18
AP003108.2-202ENST00000541135 CUX1P39880 1505 aa34.91■■■■□ 3.18
AP003108.2-202ENST00000541135 FGD5Q6ZNL6 1462 aa34.87■■■■□ 3.17
AP003108.2-202ENST00000541135 CHD1O14646 1710 aa34.83■■■■□ 3.17
AP003108.2-202ENST00000541135 RAD54L2Q9Y4B4 1467 aa34.81■■■■□ 3.16
AP003108.2-202ENST00000541135 AQRO60306 1485 aaKnown RBP eCLIP34.8■■■■□ 3.165e-6■■□□□ 14.3
AP003108.2-202ENST00000541135 SUPT5HO00267 1087 aaKnown RBP34.78■■■■□ 3.16
AP003108.2-202ENST00000541135 SOGA1O94964 1423 aa34.77■■■■□ 3.16
AP003108.2-202ENST00000541135 RIMBP3CA6NJZ7 1639 aa34.7■■■■□ 3.14
AP003108.2-202ENST00000541135 RIMBP3BA6NNM3 1639 aa34.7■■■■□ 3.14
AP003108.2-202ENST00000541135 RIMBP3Q9UFD9 1639 aa34.7■■■■□ 3.14
AP003108.2-202ENST00000541135 TDRD9Q8NDG6 1382 aaKnown RBP34.6■■■■□ 3.13
AP003108.2-202ENST00000541135 ARHGEF11O15085 1522 aa34.6■■■■□ 3.13
AP003108.2-202ENST00000541135 PBRM1Q86U86 1689 aa34.6■■■■□ 3.13
AP003108.2-202ENST00000541135 TRIM41Q8WV44 630 aa34.59■■■■□ 3.13
AP003108.2-202ENST00000541135 SNAPC4Q5SXM2 1469 aa34.58■■■■□ 3.13
AP003108.2-202ENST00000541135 BIVM-ERCC5R4GMW8 1640 aa34.58■■■■□ 3.13
AP003108.2-202ENST00000541135 MAGI1Q96QZ7 1491 aaPredicted RBP34.58■■■■□ 3.13
AP003108.2-202ENST00000541135 ABCA5Q8WWZ7 1642 aa34.56■■■■□ 3.12
AP003108.2-202ENST00000541135 ABCA10Q8WWZ4 1543 aa34.55■■■■□ 3.12
AP003108.2-202ENST00000541135 GRIN2BQ13224 1484 aa34.54■■■■□ 3.12
AP003108.2-202ENST00000541135 TOP2BQ02880 1626 aa34.52■■■■□ 3.12
AP003108.2-202ENST00000541135 CLASP1Q7Z460 1538 aa34.44■■■■□ 3.1
AP003108.2-202ENST00000541135 SYNJ1O43426 1573 aa34.44■■■■□ 3.1
AP003108.2-202ENST00000541135 GAPVD1Q14C86 1478 aa34.43■■■■□ 3.1
AP003108.2-202ENST00000541135 SYNJ2O15056 1496 aa34.41■■■■□ 3.1
AP003108.2-202ENST00000541135 WRNQ14191 1432 aaPredicted RBP eCLIP34.4■■■■□ 3.1
AP003108.2-202ENST00000541135 FBLN2P98095 1184 aa34.32■■■■□ 3.08
AP003108.2-202ENST00000541135 ARAP1Q96P48 1450 aa34.27■■■■□ 3.08
AP003108.2-202ENST00000541135 ADAMTS12P58397 1594 aa34.26■■■■□ 3.07
AP003108.2-202ENST00000541135 CHMP7Q8WUX9 453 aaPredicted RBP34.21■■■■□ 3.07
AP003108.2-202ENST00000541135 ERICH3Q5RHP9 1530 aa34.14■■■■□ 3.06
AP003108.2-202ENST00000541135 GRIN2AQ12879 1464 aa34.13■■■■□ 3.05
AP003108.2-202ENST00000541135 FHAD1B1AJZ9 1412 aa34.03■■■■□ 3.04
AP003108.2-202ENST00000541135 CEP170Q5SW79 1584 aa34.02■■■■□ 3.04
AP003108.2-202ENST00000541135 NUP160Q12769 1436 aa34.02■■■■□ 3.04
AP003108.2-202ENST00000541135 CYB5RLQ6IPT4 315 aa34■■■■□ 3.03
AP003108.2-202ENST00000541135 SHROOM2Q13796 1616 aa33.94■■■■□ 3.02
AP003108.2-202ENST00000541135 ERCC6L2Q5T890 1561 aa33.8■■■■□ 3
AP003108.2-202ENST00000541135 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
AP003108.2-202ENST00000541135 CUL7Q14999 1698 aa33.79■■■■□ 3
AP003108.2-202ENST00000541135 KIF27Q86VH2 1401 aa33.7■■■□□ 2.99
AP003108.2-202ENST00000541135 IGF1RP08069 1367 aa33.57■■■□□ 2.96
AP003108.2-202ENST00000541135 PRG4Q92954 1404 aaPredicted RBP33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms