RNA–Protein interactions for RNA: ENST00000547217.5

PACS2-205, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 5 BASIC

Gene PACS2, Length 2,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-205ENST00000547217 NISCHQ9Y2I1 1504 aa38.62■■■■□ 3.77
PACS2-205ENST00000547217 CCDC180Q9P1Z9 1646 aa33.37■■■□□ 2.93
PACS2-205ENST00000547217 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
PACS2-205ENST00000547217 DCAF8L2P0C7V8 631 aa32.21■■■□□ 2.75
PACS2-205ENST00000547217 SHROOM4Q9ULL8 1493 aa32.05■■■□□ 2.72
PACS2-205ENST00000547217 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
PACS2-205ENST00000547217 ABCC9O60706 1549 aa31.68■■■□□ 2.66
PACS2-205ENST00000547217 MYO15BQ96JP2 1530 aa31.22■■■□□ 2.59
PACS2-205ENST00000547217 NACADO15069 1562 aa31.07■■■□□ 2.56
PACS2-205ENST00000547217 SCRIBQ14160 1630 aa31.01■■■□□ 2.55
PACS2-205ENST00000547217 SUPT5HO00267 1087 aaKnown RBP30.97■■■□□ 2.55
PACS2-205ENST00000547217 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
PACS2-205ENST00000547217 UNC13AQ9UPW8 1703 aa30.29■■■□□ 2.44
PACS2-205ENST00000547217 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
PACS2-205ENST00000547217 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.41
PACS2-205ENST00000547217 PABPN1Q86U42 306 aaKnown RBP eCLIP30.05■■■□□ 2.41e-6■■■■□ 24.5
PACS2-205ENST00000547217 BICRAQ9NZM4 1560 aa29.95■■■□□ 2.39
PACS2-205ENST00000547217 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
PACS2-205ENST00000547217 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
PACS2-205ENST00000547217 WIZO95785 1651 aa29.73■■■□□ 2.35
PACS2-205ENST00000547217 CHIC1Q5VXU3 224 aa29.65■■■□□ 2.34
PACS2-205ENST00000547217 SMARCA4P51532 1647 aa29.62■■■□□ 2.33
PACS2-205ENST00000547217 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
PACS2-205ENST00000547217 PEG3Q9GZU2 1588 aa29.14■■■□□ 2.25
PACS2-205ENST00000547217 CCDC88BA6NC98 1476 aa29.11■■■□□ 2.25
PACS2-205ENST00000547217 ATAD2BQ9ULI0 1458 aa29.11■■■□□ 2.25
PACS2-205ENST00000547217 SMARCA2P51531 1590 aa29.08■■■□□ 2.25
PACS2-205ENST00000547217 EIF4G1Q04637 1599 aaKnown RBP29.02■■■□□ 2.24
PACS2-205ENST00000547217 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
PACS2-205ENST00000547217 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
PACS2-205ENST00000547217 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
PACS2-205ENST00000547217 LOC105371045A0A1W2PR82 267 aa28.7■■■□□ 2.18
PACS2-205ENST00000547217 ABCC8Q09428 1581 aa28.67■■■□□ 2.18
PACS2-205ENST00000547217 HMGXB3Q12766 1538 aa28.66■■■□□ 2.18
PACS2-205ENST00000547217 FAM9AQ8IZU1 332 aaPredicted RBP28.63■■■□□ 2.17
PACS2-205ENST00000547217 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
PACS2-205ENST00000547217 EHMT2Q96KQ7 1210 aa28.37■■■□□ 2.13
PACS2-205ENST00000547217 WRNQ14191 1432 aaPredicted RBP eCLIP28.34■■■□□ 2.13
PACS2-205ENST00000547217 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
PACS2-205ENST00000547217 CFTRP13569 1480 aa28.21■■■□□ 2.11
PACS2-205ENST00000547217 SOGA1O94964 1423 aa28.19■■■□□ 2.1
PACS2-205ENST00000547217 RUSC2Q8N2Y8 1516 aa28.12■■■□□ 2.09
PACS2-205ENST00000547217 CADPSQ9ULU8 1353 aa28.1■■■□□ 2.09
PACS2-205ENST00000547217 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
PACS2-205ENST00000547217 TOP2BQ02880 1626 aa28■■■□□ 2.07
PACS2-205ENST00000547217 PRDM2Q13029 1718 aa27.97■■■□□ 2.07
PACS2-205ENST00000547217 CSRNP3Q8WYN3 585 aa27.96■■■□□ 2.07
PACS2-205ENST00000547217 CUX1P39880 1505 aa27.95■■■□□ 2.06
PACS2-205ENST00000547217 BIVM-ERCC5R4GMW8 1640 aa27.93■■■□□ 2.06
PACS2-205ENST00000547217 EEA1Q15075 1411 aa27.92■■■□□ 2.06
PACS2-205ENST00000547217 NESP48681 1621 aa27.92■■■□□ 2.06
PACS2-205ENST00000547217 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
PACS2-205ENST00000547217 UBTFP17480 764 aaKnown RBP27.73■■■□□ 2.03
PACS2-205ENST00000547217 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
PACS2-205ENST00000547217 GOLGA3Q08378 1498 aa27.66■■■□□ 2.02
PACS2-205ENST00000547217 TNIKQ9UKE5 1360 aa27.63■■■□□ 2.01
PACS2-205ENST00000547217 PCGF6Q9BYE7 350 aa27.63■■■□□ 2.01
PACS2-205ENST00000547217 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
PACS2-205ENST00000547217 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
PACS2-205ENST00000547217 KIF21BO75037 1637 aa27.59■■■□□ 2.01
PACS2-205ENST00000547217 CEP162Q5TB80 1403 aa27.57■■■□□ 2
PACS2-205ENST00000547217 KIF27Q86VH2 1401 aa27.56■■■□□ 2
PACS2-205ENST00000547217 RAPGEF2Q9Y4G8 1499 aa27.56■■■□□ 2
PACS2-205ENST00000547217 PDS5BQ9NTI5 1447 aa27.53■■■□□ 2
PACS2-205ENST00000547217 TOPBP1Q92547 1522 aa27.52■■■□□ 2
PACS2-205ENST00000547217 DNMBPQ6XZF7 1577 aa27.52■■■□□ 2
PACS2-205ENST00000547217 CUX2O14529 1486 aa27.5■■□□□ 1.99
PACS2-205ENST00000547217 KIF21AQ7Z4S6 1674 aa27.47■■□□□ 1.99
PACS2-205ENST00000547217 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
PACS2-205ENST00000547217 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.98
PACS2-205ENST00000547217 PPARGC1BQ86YN6 1023 aaKnown RBP27.44■■□□□ 1.98
PACS2-205ENST00000547217 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
PACS2-205ENST00000547217 POLA1P09884 1462 aaPredicted RBP27.43■■□□□ 1.98
PACS2-205ENST00000547217 RANGAP1P46060 587 aaPredicted RBP27.41■■□□□ 1.98
PACS2-205ENST00000547217 TRIM26Q12899 539 aaPredicted RBP27.38■■□□□ 1.97
PACS2-205ENST00000547217 IGF1RP08069 1367 aa27.37■■□□□ 1.97
PACS2-205ENST00000547217 ERICH3Q5RHP9 1530 aa27.33■■□□□ 1.97
PACS2-205ENST00000547217 CLIP1P30622 1438 aa27.29■■□□□ 1.96
PACS2-205ENST00000547217 ABCA10Q8WWZ4 1543 aa27.29■■□□□ 1.96
PACS2-205ENST00000547217 CARMIL1Q5VZK9 1371 aa27.23■■□□□ 1.95
PACS2-205ENST00000547217 TDRD9Q8NDG6 1382 aaKnown RBP27.18■■□□□ 1.94
PACS2-205ENST00000547217 TTBK1Q5TCY1 1321 aaPredicted RBP27.18■■□□□ 1.94
PACS2-205ENST00000547217 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
PACS2-205ENST00000547217 WDR97A6NE52 1622 aa27.14■■□□□ 1.93
PACS2-205ENST00000547217 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
PACS2-205ENST00000547217 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
PACS2-205ENST00000547217 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
PACS2-205ENST00000547217 VPS8Q8N3P4 1428 aa27.04■■□□□ 1.92
PACS2-205ENST00000547217 ABCA5Q8WWZ7 1642 aa27.03■■□□□ 1.92
PACS2-205ENST00000547217 ARAP1Q96P48 1450 aa26.98■■□□□ 1.91
PACS2-205ENST00000547217 WDR62O43379 1518 aa26.97■■□□□ 1.91
PACS2-205ENST00000547217 CUL7Q14999 1698 aa26.96■■□□□ 1.91
PACS2-205ENST00000547217 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.9
PACS2-205ENST00000547217 ARHGAP35Q9NRY4 1499 aa26.93■■□□□ 1.9
PACS2-205ENST00000547217 HRCP23327 699 aa26.9■■□□□ 1.9
PACS2-205ENST00000547217 APLP2Q06481 763 aa26.87■■□□□ 1.89
PACS2-205ENST00000547217 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
PACS2-205ENST00000547217 THOC2Q8NI27 1593 aaKnown RBP26.86■■□□□ 1.89
PACS2-205ENST00000547217 IFT140Q96RY7 1462 aa26.84■■□□□ 1.89
PACS2-205ENST00000547217 P3H3Q8IVL6 736 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms