RNA–Protein interactions for RNA: ENST00000546915.1

PACS2-204, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 4

Gene PACS2, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-204ENST00000546915 NISCHQ9Y2I1 1504 aa35.82■■■■□ 3.32
PACS2-204ENST00000546915 CCDC180Q9P1Z9 1646 aa31.57■■■□□ 2.64
PACS2-204ENST00000546915 ABCC9O60706 1549 aa30.78■■■□□ 2.52
PACS2-204ENST00000546915 ZCCHC6Q5VYS8 1495 aaKnown RBP29.93■■■□□ 2.38
PACS2-204ENST00000546915 DCAF1Q9Y4B6 1507 aa29.78■■■□□ 2.36
PACS2-204ENST00000546915 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
PACS2-204ENST00000546915 NACADO15069 1562 aa29.56■■■□□ 2.32
PACS2-204ENST00000546915 DCAF8L2P0C7V8 631 aa29.51■■■□□ 2.31
PACS2-204ENST00000546915 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.29
PACS2-204ENST00000546915 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
PACS2-204ENST00000546915 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
PACS2-204ENST00000546915 SCRIBQ14160 1630 aa28.67■■■□□ 2.18
PACS2-204ENST00000546915 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
PACS2-204ENST00000546915 BICRAQ9NZM4 1560 aa28.51■■■□□ 2.15
PACS2-204ENST00000546915 SHROOM4Q9ULL8 1493 aa28.42■■■□□ 2.14
PACS2-204ENST00000546915 CC2D2AQ9P2K1 1620 aa27.8■■■□□ 2.04
PACS2-204ENST00000546915 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
PACS2-204ENST00000546915 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
PACS2-204ENST00000546915 EIF4G1Q04637 1599 aaKnown RBP27.66■■■□□ 2.02
PACS2-204ENST00000546915 SMARCA4P51532 1647 aa27.6■■■□□ 2.01
PACS2-204ENST00000546915 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
PACS2-204ENST00000546915 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
PACS2-204ENST00000546915 PEG3Q9GZU2 1588 aa27.45■■□□□ 1.99
PACS2-204ENST00000546915 ATAD2BQ9ULI0 1458 aa27.35■■□□□ 1.97
PACS2-204ENST00000546915 SMARCA2P51531 1590 aa27.33■■□□□ 1.97
PACS2-204ENST00000546915 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
PACS2-204ENST00000546915 WIZO95785 1651 aa27.27■■□□□ 1.96
PACS2-204ENST00000546915 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
PACS2-204ENST00000546915 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
PACS2-204ENST00000546915 BAZ1BQ9UIG0 1483 aaKnown RBP27.07■■□□□ 1.92
PACS2-204ENST00000546915 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
PACS2-204ENST00000546915 DNAJC5Q9H3Z4 198 aa27.01■■□□□ 1.91
PACS2-204ENST00000546915 CCDC88BA6NC98 1476 aa26.76■■□□□ 1.87
PACS2-204ENST00000546915 CUX2O14529 1486 aa26.69■■□□□ 1.86
PACS2-204ENST00000546915 ERCC6Q03468 1493 aa26.63■■□□□ 1.85
PACS2-204ENST00000546915 CADPSQ9ULU8 1353 aa26.51■■□□□ 1.83
PACS2-204ENST00000546915 CFTRP13569 1480 aa26.49■■□□□ 1.83
PACS2-204ENST00000546915 LAMC3Q9Y6N6 1575 aa26.43■■□□□ 1.82
PACS2-204ENST00000546915 NESP48681 1621 aa26.34■■□□□ 1.81
PACS2-204ENST00000546915 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
PACS2-204ENST00000546915 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
PACS2-204ENST00000546915 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
PACS2-204ENST00000546915 FANCD2Q9BXW9 1451 aa26.12■■□□□ 1.77
PACS2-204ENST00000546915 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
PACS2-204ENST00000546915 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
PACS2-204ENST00000546915 ABCC8Q09428 1581 aa25.93■■□□□ 1.74
PACS2-204ENST00000546915 WRNQ14191 1432 aaPredicted RBP eCLIP25.88■■□□□ 1.73
PACS2-204ENST00000546915 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
PACS2-204ENST00000546915 CHIC1Q5VXU3 224 aa25.84■■□□□ 1.73
PACS2-204ENST00000546915 URB2Q14146 1524 aaKnown RBP25.83■■□□□ 1.72
PACS2-204ENST00000546915 CUX1P39880 1505 aa25.81■■□□□ 1.72
PACS2-204ENST00000546915 DNMBPQ6XZF7 1577 aa25.8■■□□□ 1.72
PACS2-204ENST00000546915 TOP2BQ02880 1626 aa25.79■■□□□ 1.72
PACS2-204ENST00000546915 WDR62O43379 1518 aa25.78■■□□□ 1.72
PACS2-204ENST00000546915 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
PACS2-204ENST00000546915 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
PACS2-204ENST00000546915 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
PACS2-204ENST00000546915 TRIM41Q8WV44 630 aa25.7■■□□□ 1.7
PACS2-204ENST00000546915 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
PACS2-204ENST00000546915 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
PACS2-204ENST00000546915 SOGA1O94964 1423 aa25.54■■□□□ 1.68
PACS2-204ENST00000546915 TARBP1Q13395 1621 aaKnown RBP25.49■■□□□ 1.67
PACS2-204ENST00000546915 IFT140Q96RY7 1462 aa25.49■■□□□ 1.67
PACS2-204ENST00000546915 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
PACS2-204ENST00000546915 RAD54L2Q9Y4B4 1467 aa25.45■■□□□ 1.66
PACS2-204ENST00000546915 OSCARQ8IYS5 282 aa25.4■■□□□ 1.66
PACS2-204ENST00000546915 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
PACS2-204ENST00000546915 KIF27Q86VH2 1401 aa25.31■■□□□ 1.64
PACS2-204ENST00000546915 EEA1Q15075 1411 aa25.29■■□□□ 1.64
PACS2-204ENST00000546915 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
PACS2-204ENST00000546915 ZNF608Q9ULD9 1512 aaPredicted RBP25.26■■□□□ 1.63
PACS2-204ENST00000546915 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
PACS2-204ENST00000546915 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
PACS2-204ENST00000546915 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
PACS2-204ENST00000546915 AQRO60306 1485 aaKnown RBP eCLIP25.22■■□□□ 1.63
PACS2-204ENST00000546915 IGF1RP08069 1367 aa25.21■■□□□ 1.63
PACS2-204ENST00000546915 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
PACS2-204ENST00000546915 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
PACS2-204ENST00000546915 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
PACS2-204ENST00000546915 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
PACS2-204ENST00000546915 RIMBP3CA6NJZ7 1639 aa25.11■■□□□ 1.61
PACS2-204ENST00000546915 RIMBP3BA6NNM3 1639 aa25.11■■□□□ 1.61
PACS2-204ENST00000546915 RIMBP3Q9UFD9 1639 aa25.11■■□□□ 1.61
PACS2-204ENST00000546915 PBRM1Q86U86 1689 aa25.09■■□□□ 1.61
PACS2-204ENST00000546915 MAGI1Q96QZ7 1491 aaPredicted RBP25.03■■□□□ 1.6
PACS2-204ENST00000546915 PRXQ9BXM0 1461 aa25.03■■□□□ 1.6
PACS2-204ENST00000546915 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
PACS2-204ENST00000546915 CUL7Q14999 1698 aa25.01■■□□□ 1.59
PACS2-204ENST00000546915 FAM9AQ8IZU1 332 aaPredicted RBP25■■□□□ 1.59
PACS2-204ENST00000546915 ARHGEF11O15085 1522 aa25■■□□□ 1.59
PACS2-204ENST00000546915 FHAD1B1AJZ9 1412 aa24.99■■□□□ 1.59
PACS2-204ENST00000546915 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
PACS2-204ENST00000546915 RAPGEF2Q9Y4G8 1499 aa24.93■■□□□ 1.58
PACS2-204ENST00000546915 SYNJ2O15056 1496 aa24.92■■□□□ 1.58
PACS2-204ENST00000546915 KIF21BO75037 1637 aa24.92■■□□□ 1.58
PACS2-204ENST00000546915 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
PACS2-204ENST00000546915 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
PACS2-204ENST00000546915 CYB5RLQ6IPT4 315 aa24.82■■□□□ 1.56
PACS2-204ENST00000546915 GRIN2AQ12879 1464 aa24.82■■□□□ 1.56
PACS2-204ENST00000546915 CHD1O14646 1710 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms