RNA–Protein interactions for RNA: ENST00000361034.7

GRAMD4-201, Transcript of GRAM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRAMD4, Length 4,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-201ENST00000361034 NISCHQ9Y2I1 1504 aa23.3■■□□□ 1.32
GRAMD4-201ENST00000361034 DCAF8L2P0C7V8 631 aa22.26■■□□□ 1.15
GRAMD4-201ENST00000361034 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
GRAMD4-201ENST00000361034 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.01
GRAMD4-201ENST00000361034 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
GRAMD4-201ENST00000361034 PCGF6Q9BYE7 350 aa20.9■□□□□ 0.94
GRAMD4-201ENST00000361034 FAM9AQ8IZU1 332 aaPredicted RBP20.42■□□□□ 0.86
GRAMD4-201ENST00000361034 TTBK1Q5TCY1 1321 aaPredicted RBP20.31■□□□□ 0.84
GRAMD4-201ENST00000361034 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
GRAMD4-201ENST00000361034 HRCP23327 699 aa20.14■□□□□ 0.81
GRAMD4-201ENST00000361034 CENPBP07199 599 aaPredicted RBP20.08■□□□□ 0.8
GRAMD4-201ENST00000361034 PPARGC1BQ86YN6 1023 aaKnown RBP20.03■□□□□ 0.8
GRAMD4-201ENST00000361034 ZEB1P37275 1124 aaPredicted RBP20.01■□□□□ 0.79
GRAMD4-201ENST00000361034 CCER1Q8TC90 406 aaPredicted RBP20.01■□□□□ 0.79
GRAMD4-201ENST00000361034 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
GRAMD4-201ENST00000361034 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
GRAMD4-201ENST00000361034 APLP2Q06481 763 aa19.86■□□□□ 0.77
GRAMD4-201ENST00000361034 LOC105371045A0A1W2PR82 267 aa19.77■□□□□ 0.76
GRAMD4-201ENST00000361034 TRIM26Q12899 539 aaPredicted RBP19.74■□□□□ 0.75
GRAMD4-201ENST00000361034 RANGAP1P46060 587 aaPredicted RBP19.7■□□□□ 0.74
GRAMD4-201ENST00000361034 MYT1Q01538 1121 aa19.65■□□□□ 0.74
GRAMD4-201ENST00000361034 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
GRAMD4-201ENST00000361034 ABCC9O60706 1549 aa19.55■□□□□ 0.72
GRAMD4-201ENST00000361034 ERICH6Q7L0X2 663 aa19.55■□□□□ 0.72
GRAMD4-201ENST00000361034 UBTFP17480 764 aaKnown RBP19.45■□□□□ 0.7
GRAMD4-201ENST00000361034 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
GRAMD4-201ENST00000361034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
GRAMD4-201ENST00000361034 NEFLP07196 543 aa19.31■□□□□ 0.68
GRAMD4-201ENST00000361034 CCDC180Q9P1Z9 1646 aa19.28■□□□□ 0.68
GRAMD4-201ENST00000361034 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
GRAMD4-201ENST00000361034 GTF3C3Q9Y5Q9 886 aa19.2■□□□□ 0.66
GRAMD4-201ENST00000361034 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
GRAMD4-201ENST00000361034 ATP1B4Q9UN42 357 aaPredicted RBP19.19■□□□□ 0.66
GRAMD4-201ENST00000361034 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
GRAMD4-201ENST00000361034 ITGAEP38570 1179 aa19.03■□□□□ 0.64
GRAMD4-201ENST00000361034 SCRIBQ14160 1630 aa18.96■□□□□ 0.63
GRAMD4-201ENST00000361034 ACIN1Q9UKV3 1341 aaKnown RBP18.92■□□□□ 0.62
GRAMD4-201ENST00000361034 BCANQ96GW7 911 aa18.86■□□□□ 0.61
GRAMD4-201ENST00000361034 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
GRAMD4-201ENST00000361034 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
GRAMD4-201ENST00000361034 NEUROD1Q13562 356 aa18.69■□□□□ 0.58
GRAMD4-201ENST00000361034 POLR3GLQ9BT43 218 aa18.69■□□□□ 0.58
GRAMD4-201ENST00000361034 ZNF316A6NFI3 1004 aaPredicted RBP18.66■□□□□ 0.58
GRAMD4-201ENST00000361034 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
GRAMD4-201ENST00000361034 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
GRAMD4-201ENST00000361034 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
GRAMD4-201ENST00000361034 NACADO15069 1562 aa18.52■□□□□ 0.56
GRAMD4-201ENST00000361034 DAXXQ9UER7 740 aaPredicted RBP18.52■□□□□ 0.56
GRAMD4-201ENST00000361034 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.55
GRAMD4-201ENST00000361034 RTL5Q5HYW3 569 aaPredicted RBP18.48■□□□□ 0.55
GRAMD4-201ENST00000361034 MYO15BQ96JP2 1530 aa18.43■□□□□ 0.54
GRAMD4-201ENST00000361034 FAM50AQ14320 339 aaKnown RBP18.36■□□□□ 0.53
GRAMD4-201ENST00000361034 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.52
GRAMD4-201ENST00000361034 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
GRAMD4-201ENST00000361034 ANP32CO43423 234 aa18.29■□□□□ 0.52
GRAMD4-201ENST00000361034 FKBP8Q14318 412 aa18.29■□□□□ 0.52
GRAMD4-201ENST00000361034 MIER1Q8N108 512 aa18.27■□□□□ 0.51
GRAMD4-201ENST00000361034 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
GRAMD4-201ENST00000361034 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
GRAMD4-201ENST00000361034 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
GRAMD4-201ENST00000361034 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
GRAMD4-201ENST00000361034 DDX10Q13206 875 aaKnown RBP18.11■□□□□ 0.49
GRAMD4-201ENST00000361034 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
GRAMD4-201ENST00000361034 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
GRAMD4-201ENST00000361034 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
GRAMD4-201ENST00000361034 WRNQ14191 1432 aaPredicted RBP eCLIP18.04■□□□□ 0.48
GRAMD4-201ENST00000361034 NPM2Q86SE8 214 aaKnown RBP18.03■□□□□ 0.48
GRAMD4-201ENST00000361034 FBLN2P98095 1184 aa18.03■□□□□ 0.48
GRAMD4-201ENST00000361034 EEA1Q15075 1411 aa18.02■□□□□ 0.48
GRAMD4-201ENST00000361034 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
GRAMD4-201ENST00000361034 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
GRAMD4-201ENST00000361034 EIF5BO60841 1220 aaKnown RBP17.98■□□□□ 0.47
GRAMD4-201ENST00000361034 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
GRAMD4-201ENST00000361034 NBR1Q14596 966 aa17.97■□□□□ 0.47
GRAMD4-201ENST00000361034 ANP32AP39687 249 aaKnown RBP17.97■□□□□ 0.47
GRAMD4-201ENST00000361034 CLIP1P30622 1438 aa17.96■□□□□ 0.47
GRAMD4-201ENST00000361034 HIRIP3Q9BW71 556 aaPredicted RBP17.95■□□□□ 0.46
GRAMD4-201ENST00000361034 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
GRAMD4-201ENST00000361034 ARID3CA6NKF2 412 aa17.93■□□□□ 0.46
GRAMD4-201ENST00000361034 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
GRAMD4-201ENST00000361034 GOLGA3Q08378 1498 aa17.92■□□□□ 0.46
GRAMD4-201ENST00000361034 TNIKQ9UKE5 1360 aa17.88■□□□□ 0.45
GRAMD4-201ENST00000361034 ANP32EQ9BTT0 268 aa17.88■□□□□ 0.45
GRAMD4-201ENST00000361034 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
GRAMD4-201ENST00000361034 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
GRAMD4-201ENST00000361034 SOGA1O94964 1423 aa17.82■□□□□ 0.44
GRAMD4-201ENST00000361034 WIZO95785 1651 aa17.81■□□□□ 0.44
GRAMD4-201ENST00000361034 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
GRAMD4-201ENST00000361034 SALL2Q9Y467 1007 aaPredicted RBP17.79■□□□□ 0.44
GRAMD4-201ENST00000361034 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
GRAMD4-201ENST00000361034 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
GRAMD4-201ENST00000361034 ABCC8Q09428 1581 aa17.75■□□□□ 0.43
GRAMD4-201ENST00000361034 SUPT16HQ9Y5B9 1047 aaKnown RBP17.74■□□□□ 0.43
GRAMD4-201ENST00000361034 CCDC136Q96JN2 1154 aa17.73■□□□□ 0.43
GRAMD4-201ENST00000361034 TONSLQ96HA7 1378 aa17.73■□□□□ 0.43
GRAMD4-201ENST00000361034 ZBTB47Q9UFB7 747 aaPredicted RBP17.72■□□□□ 0.43
GRAMD4-201ENST00000361034 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.43
GRAMD4-201ENST00000361034 ZNF777Q9ULD5 760 aaPredicted RBP17.7■□□□□ 0.42
GRAMD4-201ENST00000361034 SENP3-EIF4A1A0A087X0R7 540 aa17.7■□□□□ 0.42
GRAMD4-201ENST00000361034 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms