RNA–Protein interactions for RNA: ENST00000490521.1

COMTD1-205, Transcript of catechol-O-methyltransferase domain containing 1, humanhuman

TSL 2

Gene COMTD1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMTD1-205ENST00000490521 NISCHQ9Y2I1 1504 aa53.67■■■■■ 6.18
COMTD1-205ENST00000490521 CCDC180Q9P1Z9 1646 aa48.11■■■■■ 5.29
COMTD1-205ENST00000490521 ABCC9O60706 1549 aa47.9■■■■■ 5.26
COMTD1-205ENST00000490521 RB1CC1Q8TDY2 1594 aa45.71■■■■■ 4.91
COMTD1-205ENST00000490521 NACADO15069 1562 aa45.43■■■■■ 4.86
COMTD1-205ENST00000490521 DCAF8L2P0C7V8 631 aa45.3■■■■■ 4.84
COMTD1-205ENST00000490521 MYO15BQ96JP2 1530 aa44.85■■■■■ 4.77
COMTD1-205ENST00000490521 DNAJC5BQ9UF47 199 aa44.68■■■■■ 4.74
COMTD1-205ENST00000490521 UNC13AQ9UPW8 1703 aa44.64■■■■■ 4.74
COMTD1-205ENST00000490521 PABPN1Q86U42 306 aaKnown RBP eCLIP44.63■■■■■ 4.74
COMTD1-205ENST00000490521 ZCCHC6Q5VYS8 1495 aaKnown RBP44.52■■■■■ 4.72
COMTD1-205ENST00000490521 DCAF1Q9Y4B6 1507 aa44.34■■■■■ 4.69
COMTD1-205ENST00000490521 BICRAQ9NZM4 1560 aa44.3■■■■■ 4.68
COMTD1-205ENST00000490521 SCRIBQ14160 1630 aa43.84■■■■■ 4.61
COMTD1-205ENST00000490521 SHROOM4Q9ULL8 1493 aa43.79■■■■■ 4.6
COMTD1-205ENST00000490521 CC2D2AQ9P2K1 1620 aa43.28■■■■■ 4.52
COMTD1-205ENST00000490521 EIF4G1Q04637 1599 aaKnown RBP43.24■■■■■ 4.51
COMTD1-205ENST00000490521 CECR2Q9BXF3 1484 aa43.14■■■■■ 4.5
COMTD1-205ENST00000490521 NCAPD3P42695 1498 aa41.92■■■■■ 4.3
COMTD1-205ENST00000490521 SMARCA4P51532 1647 aa41.84■■■■■ 4.29
COMTD1-205ENST00000490521 ATAD2BQ9ULI0 1458 aa41.81■■■■■ 4.28
COMTD1-205ENST00000490521 SMARCA2P51531 1590 aa41.76■■■■■ 4.27
COMTD1-205ENST00000490521 BAZ1AQ9NRL2 1556 aaPredicted RBP41.68■■■■■ 4.26
COMTD1-205ENST00000490521 HMGXB3Q12766 1538 aa41.64■■■■■ 4.26
COMTD1-205ENST00000490521 BAZ1BQ9UIG0 1483 aaKnown RBP41.47■■■■■ 4.23
COMTD1-205ENST00000490521 PEG3Q9GZU2 1588 aa41.41■■■■■ 4.22
COMTD1-205ENST00000490521 ERCC6Q03468 1493 aa41.41■■■■■ 4.22
COMTD1-205ENST00000490521 MROH2BQ7Z745 1585 aa41.34■■■■■ 4.21
COMTD1-205ENST00000490521 CUX2O14529 1486 aa41.22■■■■■ 4.19
COMTD1-205ENST00000490521 NESP48681 1621 aa41.18■■■■■ 4.18
COMTD1-205ENST00000490521 LAMC3Q9Y6N6 1575 aa40.97■■■■■ 4.15
COMTD1-205ENST00000490521 DNAJC5Q9H3Z4 198 aa40.94■■■■■ 4.14
COMTD1-205ENST00000490521 WIZO95785 1651 aa40.88■■■■■ 4.13
COMTD1-205ENST00000490521 PDS5BQ9NTI5 1447 aa40.75■■■■■ 4.11
COMTD1-205ENST00000490521 THOC2Q8NI27 1593 aaKnown RBP40.73■■■■■ 4.11
COMTD1-205ENST00000490521 KIF21AQ7Z4S6 1674 aa40.69■■■■■ 4.1
COMTD1-205ENST00000490521 CADPSQ9ULU8 1353 aa40.67■■■■■ 4.1
COMTD1-205ENST00000490521 RSF1Q96T23 1441 aaPredicted RBP40.57■■■■■ 4.08
COMTD1-205ENST00000490521 TOP2AP11388 1531 aaKnown RBP40.39■■■■■ 4.06
COMTD1-205ENST00000490521 MRC2Q9UBG0 1479 aa40.37■■■■■ 4.05
COMTD1-205ENST00000490521 CEP164Q9UPV0 1460 aa40.26■■■■■ 4.03
COMTD1-205ENST00000490521 WDR62O43379 1518 aa40.23■■■■■ 4.03
COMTD1-205ENST00000490521 CFTRP13569 1480 aa40.23■■■■■ 4.03
COMTD1-205ENST00000490521 FANCD2Q9BXW9 1451 aa40.21■■■■■ 4.03
COMTD1-205ENST00000490521 CCDC88BA6NC98 1476 aa39.91■■■■□ 3.98
COMTD1-205ENST00000490521 PRDM2Q13029 1718 aa39.9■■■■□ 3.98
COMTD1-205ENST00000490521 URB2Q14146 1524 aaKnown RBP39.84■■■■□ 3.97
COMTD1-205ENST00000490521 TOPBP1Q92547 1522 aa39.46■■■■□ 3.91
COMTD1-205ENST00000490521 ABCC8Q09428 1581 aa39.44■■■■□ 3.9
COMTD1-205ENST00000490521 IFT140Q96RY7 1462 aa39.43■■■■□ 3.9
COMTD1-205ENST00000490521 OSCARQ8IYS5 282 aa39.4■■■■□ 3.9
COMTD1-205ENST00000490521 DNMBPQ6XZF7 1577 aa39.35■■■■□ 3.89
COMTD1-205ENST00000490521 ZNF608Q9ULD9 1512 aaPredicted RBP39.31■■■■□ 3.88
COMTD1-205ENST00000490521 TRIM41Q8WV44 630 aa39.29■■■■□ 3.88
COMTD1-205ENST00000490521 EIF4G3O43432 1585 aaKnown RBP39.14■■■■□ 3.86
COMTD1-205ENST00000490521 TARBP1Q13395 1621 aaKnown RBP39.08■■■■□ 3.85
COMTD1-205ENST00000490521 POLA1P09884 1462 aaPredicted RBP39.07■■■■□ 3.85
COMTD1-205ENST00000490521 AQRO60306 1485 aaKnown RBP eCLIP39■■■■□ 3.837e-7■■■□□ 18.8
COMTD1-205ENST00000490521 SUPT5HO00267 1087 aaKnown RBP38.99■■■■□ 3.83
COMTD1-205ENST00000490521 SOGA1O94964 1423 aa38.92■■■■□ 3.82
COMTD1-205ENST00000490521 RAD54L2Q9Y4B4 1467 aa38.92■■■■□ 3.82
COMTD1-205ENST00000490521 FGD5Q6ZNL6 1462 aa38.86■■■■□ 3.81
COMTD1-205ENST00000490521 CUX1P39880 1505 aa38.84■■■■□ 3.81
COMTD1-205ENST00000490521 RIMBP3CA6NJZ7 1639 aa38.83■■■■□ 3.81
COMTD1-205ENST00000490521 RIMBP3BA6NNM3 1639 aa38.83■■■■□ 3.81
COMTD1-205ENST00000490521 RIMBP3Q9UFD9 1639 aa38.83■■■■□ 3.81
COMTD1-205ENST00000490521 CHD1O14646 1710 aa38.82■■■■□ 3.8
COMTD1-205ENST00000490521 TDRD9Q8NDG6 1382 aaKnown RBP38.81■■■■□ 3.8
COMTD1-205ENST00000490521 FBLN2P98095 1184 aa38.78■■■■□ 3.8
COMTD1-205ENST00000490521 WDR97A6NE52 1622 aa38.74■■■■□ 3.79
COMTD1-205ENST00000490521 ARHGEF11O15085 1522 aa38.73■■■■□ 3.79
COMTD1-205ENST00000490521 SNAPC4Q5SXM2 1469 aa38.62■■■■□ 3.77
COMTD1-205ENST00000490521 GRIN2BQ13224 1484 aa38.57■■■■□ 3.76
COMTD1-205ENST00000490521 MAGI1Q96QZ7 1491 aaPredicted RBP38.55■■■■□ 3.76
COMTD1-205ENST00000490521 CHMP7Q8WUX9 453 aaPredicted RBP38.52■■■■□ 3.76
COMTD1-205ENST00000490521 CYB5RLQ6IPT4 315 aa38.45■■■■□ 3.75
COMTD1-205ENST00000490521 GAPVD1Q14C86 1478 aa38.45■■■■□ 3.75
COMTD1-205ENST00000490521 ABCA10Q8WWZ4 1543 aa38.43■■■■□ 3.74
COMTD1-205ENST00000490521 PBRM1Q86U86 1689 aa38.43■■■■□ 3.74
COMTD1-205ENST00000490521 SYNJ2O15056 1496 aa38.41■■■■□ 3.74
COMTD1-205ENST00000490521 SYNJ1O43426 1573 aa38.4■■■■□ 3.74
COMTD1-205ENST00000490521 WRNQ14191 1432 aaPredicted RBP eCLIP38.35■■■■□ 3.73
COMTD1-205ENST00000490521 ABCA5Q8WWZ7 1642 aa38.34■■■■□ 3.73
COMTD1-205ENST00000490521 CLASP1Q7Z460 1538 aa38.34■■■■□ 3.73
COMTD1-205ENST00000490521 ARAP1Q96P48 1450 aa38.34■■■■□ 3.73
COMTD1-205ENST00000490521 TOP2BQ02880 1626 aa38.3■■■■□ 3.72
COMTD1-205ENST00000490521 BIVM-ERCC5R4GMW8 1640 aa38.29■■■■□ 3.72
COMTD1-205ENST00000490521 GRIN2AQ12879 1464 aa38.06■■■■□ 3.68
COMTD1-205ENST00000490521 ADAMTS12P58397 1594 aa38.06■■■■□ 3.68
COMTD1-205ENST00000490521 TRHP20396 242 aaPredicted RBP38.01■■■■□ 3.68
COMTD1-205ENST00000490521 ERICH3Q5RHP9 1530 aa37.97■■■■□ 3.67
COMTD1-205ENST00000490521 FHAD1B1AJZ9 1412 aa37.97■■■■□ 3.67
COMTD1-205ENST00000490521 NUP160Q12769 1436 aa37.9■■■■□ 3.66
COMTD1-205ENST00000490521 CEP170Q5SW79 1584 aa37.89■■■■□ 3.66
COMTD1-205ENST00000490521 ERCC6L2Q5T890 1561 aa37.74■■■■□ 3.63
COMTD1-205ENST00000490521 SHROOM2Q13796 1616 aa37.72■■■■□ 3.63
COMTD1-205ENST00000490521 KIF27Q86VH2 1401 aa37.59■■■■□ 3.61
COMTD1-205ENST00000490521 PRG4Q92954 1404 aaPredicted RBP37.55■■■■□ 3.6
COMTD1-205ENST00000490521 JPH4Q96JJ6 628 aa37.54■■■■□ 3.6
COMTD1-205ENST00000490521 RUSC2Q8N2Y8 1516 aa37.51■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms