RNA–Protein interactions for RNA: ENST00000456696.2

PRKAR1B-208, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, human

TSL 5

Gene PRKAR1B, Length 518 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1B-208	ENST00000456696	NISCH	Q9Y2I1	1504 aa		40.23	■■■■■ 4.03
PRKAR1B-208	ENST00000456696	CCDC180	Q9P1Z9	1646 aa		35.77	■■■■□ 3.32
PRKAR1B-208	ENST00000456696	ABCC9	O60706	1549 aa		34.91	■■■■□ 3.18
PRKAR1B-208	ENST00000456696	DCAF8L2	P0C7V8	631 aa		33.69	■■■□□ 2.98
PRKAR1B-208	ENST00000456696	RB1CC1	Q8TDY2	1594 aa		33.66	■■■□□ 2.98
PRKAR1B-208	ENST00000456696	NACAD	O15069	1562 aa		33.62	■■■□□ 2.97
PRKAR1B-208	ENST00000456696	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.52	■■■□□ 2.96
PRKAR1B-208	ENST00000456696	MYO15B	Q96JP2	1530 aa		33.41	■■■□□ 2.94
PRKAR1B-208	ENST00000456696	DCAF1	Q9Y4B6	1507 aa		33.29	■■■□□ 2.92
PRKAR1B-208	ENST00000456696	UNC13A	Q9UPW8	1703 aa		32.82	■■■□□ 2.84
PRKAR1B-208	ENST00000456696	SCRIB	Q14160	1630 aa		32.64	■■■□□ 2.82
PRKAR1B-208	ENST00000456696	PABPN1	Q86U42	306 aa	Known RBP eCLIP	32.63	■■■□□ 2.81
PRKAR1B-208	ENST00000456696	BICRA	Q9NZM4	1560 aa		32.52	■■■□□ 2.8
PRKAR1B-208	ENST00000456696	SHROOM4	Q9ULL8	1493 aa		32.29	■■■□□ 2.76
PRKAR1B-208	ENST00000456696	DNAJC5B	Q9UF47	199 aa		31.86	■■■□□ 2.69
PRKAR1B-208	ENST00000456696	EIF4G1	Q04637	1599 aa	Known RBP	31.72	■■■□□ 2.67
PRKAR1B-208	ENST00000456696	CC2D2A	Q9P2K1	1620 aa		31.57	■■■□□ 2.64
PRKAR1B-208	ENST00000456696	CECR2	Q9BXF3	1484 aa		31.37	■■■□□ 2.61
PRKAR1B-208	ENST00000456696	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	31.22	■■■□□ 2.59
PRKAR1B-208	ENST00000456696	SMARCA4	P51532	1647 aa		31.21	■■■□□ 2.59
PRKAR1B-208	ENST00000456696	SMARCA2	P51531	1590 aa		31.04	■■■□□ 2.56
PRKAR1B-208	ENST00000456696	ATAD2B	Q9ULI0	1458 aa		31.01	■■■□□ 2.55
PRKAR1B-208	ENST00000456696	MROH2B	Q7Z745	1585 aa		30.98	■■■□□ 2.55
PRKAR1B-208	ENST00000456696	NCAPD3	P42695	1498 aa		30.98	■■■□□ 2.55
PRKAR1B-208	ENST00000456696	PEG3	Q9GZU2	1588 aa		30.88	■■■□□ 2.53
PRKAR1B-208	ENST00000456696	HMGXB3	Q12766	1538 aa		30.86	■■■□□ 2.53
PRKAR1B-208	ENST00000456696	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.82	■■■□□ 2.52
PRKAR1B-208	ENST00000456696	WIZ	O95785	1651 aa		30.67	■■■□□ 2.5
PRKAR1B-208	ENST00000456696	RSF1	Q96T23	1441 aa	Predicted RBP	30.66	■■■□□ 2.5
PRKAR1B-208	ENST00000456696	TOP2A	P11388	1531 aa	Known RBP	30.38	■■■□□ 2.45
PRKAR1B-208	ENST00000456696	LAMC3	Q9Y6N6	1575 aa		30.2	■■■□□ 2.42
PRKAR1B-208	ENST00000456696	NES	P48681	1621 aa		30.19	■■■□□ 2.42
PRKAR1B-208	ENST00000456696	ERCC6	Q03468	1493 aa		30.17	■■■□□ 2.42
PRKAR1B-208	ENST00000456696	CADPS	Q9ULU8	1353 aa		30.11	■■■□□ 2.41
PRKAR1B-208	ENST00000456696	SUPT5H	O00267	1087 aa	Known RBP	30.04	■■■□□ 2.4
PRKAR1B-208	ENST00000456696	PDS5B	Q9NTI5	1447 aa		30.02	■■■□□ 2.4
PRKAR1B-208	ENST00000456696	CCDC88B	A6NC98	1476 aa		29.99	■■■□□ 2.39
PRKAR1B-208	ENST00000456696	CFTR	P13569	1480 aa		29.93	■■■□□ 2.38
PRKAR1B-208	ENST00000456696	KIF21A	Q7Z4S6	1674 aa		29.87	■■■□□ 2.37
PRKAR1B-208	ENST00000456696	FANCD2	Q9BXW9	1451 aa		29.78	■■■□□ 2.36
PRKAR1B-208	ENST00000456696	CUX2	O14529	1486 aa		29.77	■■■□□ 2.36
PRKAR1B-208	ENST00000456696	CEP164	Q9UPV0	1460 aa		29.76	■■■□□ 2.35
PRKAR1B-208	ENST00000456696	PRDM2	Q13029	1718 aa		29.75	■■■□□ 2.35
PRKAR1B-208	ENST00000456696	THOC2	Q8NI27	1593 aa	Known RBP	29.73	■■■□□ 2.35
PRKAR1B-208	ENST00000456696	MRC2	Q9UBG0	1479 aa		29.68	■■■□□ 2.34
PRKAR1B-208	ENST00000456696	WDR62	O43379	1518 aa		29.55	■■■□□ 2.32
PRKAR1B-208	ENST00000456696	URB2	Q14146	1524 aa	Known RBP	29.42	■■■□□ 2.3
PRKAR1B-208	ENST00000456696	ABCC8	Q09428	1581 aa		29.36	■■■□□ 2.29
PRKAR1B-208	ENST00000456696	TOPBP1	Q92547	1522 aa		29.29	■■■□□ 2.28
PRKAR1B-208	ENST00000456696	DNMBP	Q6XZF7	1577 aa		29.28	■■■□□ 2.28
PRKAR1B-208	ENST00000456696	IFT140	Q96RY7	1462 aa		29.12	■■■□□ 2.25
PRKAR1B-208	ENST00000456696	CUX1	P39880	1505 aa		29.07	■■■□□ 2.24
PRKAR1B-208	ENST00000456696	POLA1	P09884	1462 aa	Predicted RBP	29.04	■■■□□ 2.24
PRKAR1B-208	ENST00000456696	FGD5	Q6ZNL6	1462 aa		29	■■■□□ 2.23
PRKAR1B-208	ENST00000456696	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.97	■■■□□ 2.23
PRKAR1B-208	ENST00000456696	SOGA1	O94964	1423 aa		28.95	■■■□□ 2.23
PRKAR1B-208	ENST00000456696	TARBP1	Q13395	1621 aa	Known RBP	28.93	■■■□□ 2.22
PRKAR1B-208	ENST00000456696	ZNF608	Q9ULD9	1512 aa	Predicted RBP	28.91	■■■□□ 2.22
PRKAR1B-208	ENST00000456696	RAD54L2	Q9Y4B4	1467 aa		28.9	■■■□□ 2.22
PRKAR1B-208	ENST00000456696	TOP2B	Q02880	1626 aa		28.87	■■■□□ 2.21
PRKAR1B-208	ENST00000456696	BIVM-ERCC5	R4GMW8	1640 aa		28.87	■■■□□ 2.21
PRKAR1B-208	ENST00000456696	EIF4G3	O43432	1585 aa	Known RBP	28.84	■■■□□ 2.21
PRKAR1B-208	ENST00000456696	SYNJ1	O43426	1573 aa		28.84	■■■□□ 2.21
PRKAR1B-208	ENST00000456696	WDR97	A6NE52	1622 aa		28.79	■■■□□ 2.2
PRKAR1B-208	ENST00000456696	AQR	O60306	1485 aa	Known RBP eCLIP	28.78	■■■□□ 2.2
PRKAR1B-208	ENST00000456696	TDRD9	Q8NDG6	1382 aa	Known RBP	28.75	■■■□□ 2.19
PRKAR1B-208	ENST00000456696	DNAJC5	Q9H3Z4	198 aa		28.74	■■■□□ 2.19
PRKAR1B-208	ENST00000456696	ABCA10	Q8WWZ4	1543 aa		28.71	■■■□□ 2.19
PRKAR1B-208	ENST00000456696	GRIN2B	Q13224	1484 aa		28.62	■■■□□ 2.17
PRKAR1B-208	ENST00000456696	GAPVD1	Q14C86	1478 aa		28.62	■■■□□ 2.17
PRKAR1B-208	ENST00000456696	OSCAR	Q8IYS5	282 aa		28.58	■■■□□ 2.17
PRKAR1B-208	ENST00000456696	ABCA5	Q8WWZ7	1642 aa		28.58	■■■□□ 2.17
PRKAR1B-208	ENST00000456696	PBRM1	Q86U86	1689 aa		28.56	■■■□□ 2.16
PRKAR1B-208	ENST00000456696	SNAPC4	Q5SXM2	1469 aa		28.55	■■■□□ 2.16
PRKAR1B-208	ENST00000456696	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.53	■■■□□ 2.16
PRKAR1B-208	ENST00000456696	FBLN2	P98095	1184 aa		28.53	■■■□□ 2.16
PRKAR1B-208	ENST00000456696	CHD1	O14646	1710 aa		28.47	■■■□□ 2.15
PRKAR1B-208	ENST00000456696	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.45	■■■□□ 2.14
PRKAR1B-208	ENST00000456696	SYNJ2	O15056	1496 aa		28.4	■■■□□ 2.14
PRKAR1B-208	ENST00000456696	ERICH3	Q5RHP9	1530 aa		28.39	■■■□□ 2.14
PRKAR1B-208	ENST00000456696	KIF27	Q86VH2	1401 aa		28.39	■■■□□ 2.14
PRKAR1B-208	ENST00000456696	TRIM41	Q8WV44	630 aa		28.39	■■■□□ 2.14
PRKAR1B-208	ENST00000456696	ADAMTS12	P58397	1594 aa		28.32	■■■□□ 2.12
PRKAR1B-208	ENST00000456696	FHAD1	B1AJZ9	1412 aa		28.3	■■■□□ 2.12
PRKAR1B-208	ENST00000456696	GRIN2A	Q12879	1464 aa		28.23	■■■□□ 2.11
PRKAR1B-208	ENST00000456696	IGF1R	P08069	1367 aa		28.18	■■■□□ 2.1
PRKAR1B-208	ENST00000456696	CUL7	Q14999	1698 aa		28.18	■■■□□ 2.1
PRKAR1B-208	ENST00000456696	CLASP1	Q7Z460	1538 aa		28.13	■■■□□ 2.09
PRKAR1B-208	ENST00000456696	CARMIL1	Q5VZK9	1371 aa		28.07	■■■□□ 2.08
PRKAR1B-208	ENST00000456696	NUP160	Q12769	1436 aa		28.07	■■■□□ 2.08
PRKAR1B-208	ENST00000456696	ARHGEF11	O15085	1522 aa		28.07	■■■□□ 2.08
PRKAR1B-208	ENST00000456696	CEP170	Q5SW79	1584 aa		28.06	■■■□□ 2.08
PRKAR1B-208	ENST00000456696	RIMBP3C	A6NJZ7	1639 aa		28.06	■■■□□ 2.08
PRKAR1B-208	ENST00000456696	RIMBP3B	A6NNM3	1639 aa		28.06	■■■□□ 2.08
PRKAR1B-208	ENST00000456696	RIMBP3	Q9UFD9	1639 aa		28.06	■■■□□ 2.08
PRKAR1B-208	ENST00000456696	RUSC2	Q8N2Y8	1516 aa		28.04	■■■□□ 2.08
PRKAR1B-208	ENST00000456696	CHIC1	Q5VXU3	224 aa		28.01	■■■□□ 2.07
PRKAR1B-208	ENST00000456696	RAPGEF2	Q9Y4G8	1499 aa		27.92	■■■□□ 2.06
PRKAR1B-208	ENST00000456696	EEA1	Q15075	1411 aa		27.91	■■■□□ 2.06
PRKAR1B-208	ENST00000456696	KIAA0586	Q9BVV6	1533 aa		27.86	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms