Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.2■■□□□ 1.46
KRTCAP3Q53RY4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
KRTCAP3Q53RY4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
KRTCAP3Q53RY4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KRTCAP3Q53RY4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KRTCAP3Q53RY4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.19■■□□□ 1.46
KRTCAP3Q53RY4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.18■■□□□ 1.46
KRTCAP3Q53RY4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.18■■□□□ 1.46
KRTCAP3Q53RY4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
KRTCAP3Q53RY4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KRTCAP3Q53RY4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KRTCAP3Q53RY4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
KRTCAP3Q53RY4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KRTCAP3Q53RY4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
KRTCAP3Q53RY4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KRTCAP3Q53RY4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.15■■□□□ 1.46
KRTCAP3Q53RY4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
KRTCAP3Q53RY4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KRTCAP3Q53RY4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
KRTCAP3Q53RY4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KRTCAP3Q53RY4 MIR6090-201ENST00000622481 60 ntBASIC24.13■■□□□ 1.45
KRTCAP3Q53RY4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
KRTCAP3Q53RY4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.12■■□□□ 1.45
KRTCAP3Q53RY4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.11■■□□□ 1.45
KRTCAP3Q53RY4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
KRTCAP3Q53RY4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.1■■□□□ 1.45
KRTCAP3Q53RY4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KRTCAP3Q53RY4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.1■■□□□ 1.45
KRTCAP3Q53RY4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.1■■□□□ 1.45
KRTCAP3Q53RY4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.09■■□□□ 1.45
KRTCAP3Q53RY4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
KRTCAP3Q53RY4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
KRTCAP3Q53RY4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
KRTCAP3Q53RY4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
KRTCAP3Q53RY4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
KRTCAP3Q53RY4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KRTCAP3Q53RY4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KRTCAP3Q53RY4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
KRTCAP3Q53RY4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
KRTCAP3Q53RY4 MIR639-201ENST00000384974 98 ntBASIC24.03■■□□□ 1.44
KRTCAP3Q53RY4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
KRTCAP3Q53RY4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
KRTCAP3Q53RY4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KRTCAP3Q53RY4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
KRTCAP3Q53RY4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.01■■□□□ 1.43
KRTCAP3Q53RY4 MIR4449-201ENST00000578365 66 ntBASIC24.01■■□□□ 1.43
KRTCAP3Q53RY4 LINC01971-201ENST00000617888 1048 ntBASIC24.01■■□□□ 1.43
KRTCAP3Q53RY4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
KRTCAP3Q53RY4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24■■□□□ 1.43
KRTCAP3Q53RY4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24■■□□□ 1.43
KRTCAP3Q53RY4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24■■□□□ 1.43
KRTCAP3Q53RY4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
KRTCAP3Q53RY4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
KRTCAP3Q53RY4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
KRTCAP3Q53RY4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.99■■□□□ 1.43
KRTCAP3Q53RY4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRTCAP3Q53RY4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.98■■□□□ 1.43
KRTCAP3Q53RY4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.98■■□□□ 1.43
KRTCAP3Q53RY4 MIR3648-2-201ENST00000581792 180 ntBASIC23.98■■□□□ 1.43
KRTCAP3Q53RY4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRTCAP3Q53RY4 MIR3648-1-201ENST00000615959 180 ntBASIC23.98■■□□□ 1.43
KRTCAP3Q53RY4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRTCAP3Q53RY4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.97■■□□□ 1.43
KRTCAP3Q53RY4 AC120057.4-201ENST00000624722 1615 ntBASIC23.97■■□□□ 1.43
KRTCAP3Q53RY4 DUX4L11-201ENST00000611504 1267 ntBASIC23.96■■□□□ 1.43
KRTCAP3Q53RY4 DUX4L12-201ENST00000614593 1267 ntBASIC23.96■■□□□ 1.43
KRTCAP3Q53RY4 DUX4L14-201ENST00000621227 1267 ntBASIC23.96■■□□□ 1.43
KRTCAP3Q53RY4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.96■■□□□ 1.43
KRTCAP3Q53RY4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.95■■□□□ 1.43
KRTCAP3Q53RY4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.95■■□□□ 1.42
KRTCAP3Q53RY4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KRTCAP3Q53RY4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.95■■□□□ 1.42
KRTCAP3Q53RY4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRTCAP3Q53RY4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.93■■□□□ 1.42
KRTCAP3Q53RY4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.93■■□□□ 1.42
KRTCAP3Q53RY4 AC016575.1-201ENST00000607026 382 ntBASIC23.93■■□□□ 1.42
KRTCAP3Q53RY4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KRTCAP3Q53RY4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.92■■□□□ 1.42
KRTCAP3Q53RY4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KRTCAP3Q53RY4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
KRTCAP3Q53RY4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRTCAP3Q53RY4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
KRTCAP3Q53RY4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KRTCAP3Q53RY4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
KRTCAP3Q53RY4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.9■■□□□ 1.42
KRTCAP3Q53RY4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
KRTCAP3Q53RY4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.89■■□□□ 1.41
KRTCAP3Q53RY4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRTCAP3Q53RY4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.88■■□□□ 1.41
KRTCAP3Q53RY4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KRTCAP3Q53RY4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.87■■□□□ 1.41
KRTCAP3Q53RY4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.86■■□□□ 1.41
KRTCAP3Q53RY4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRTCAP3Q53RY4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.85■■□□□ 1.41
KRTCAP3Q53RY4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRTCAP3Q53RY4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRTCAP3Q53RY4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRTCAP3Q53RY4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRTCAP3Q53RY4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRTCAP3Q53RY4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms