Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.68■■□□□ 1.7
GABREP78334 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
GABREP78334 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
GABREP78334 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.67■■□□□ 1.7
GABREP78334 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
GABREP78334 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
GABREP78334 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
GABREP78334 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.66■■□□□ 1.7
GABREP78334 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.66■■□□□ 1.7
GABREP78334 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
GABREP78334 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.65■■□□□ 1.7
GABREP78334 HSD17B1P1-201ENST00000590052 955 ntBASIC25.65■■□□□ 1.7
GABREP78334 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
GABREP78334 DUX4L11-201ENST00000611504 1267 ntBASIC25.64■■□□□ 1.7
GABREP78334 DUX4L12-201ENST00000614593 1267 ntBASIC25.64■■□□□ 1.7
GABREP78334 DUX4L14-201ENST00000621227 1267 ntBASIC25.64■■□□□ 1.7
GABREP78334 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.64■■□□□ 1.69
GABREP78334 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
GABREP78334 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
GABREP78334 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.63■■□□□ 1.69
GABREP78334 LINC01971-201ENST00000617888 1048 ntBASIC25.63■■□□□ 1.69
GABREP78334 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
GABREP78334 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
GABREP78334 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.62■■□□□ 1.69
GABREP78334 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.62■■□□□ 1.69
GABREP78334 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.62■■□□□ 1.69
GABREP78334 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.62■■□□□ 1.69
GABREP78334 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
GABREP78334 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
GABREP78334 CR559946.2-201ENST00000623684 991 ntBASIC25.61■■□□□ 1.69
GABREP78334 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
GABREP78334 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GABREP78334 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
GABREP78334 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
GABREP78334 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
GABREP78334 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
GABREP78334 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
GABREP78334 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.56■■□□□ 1.68
GABREP78334 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.56■■□□□ 1.68
GABREP78334 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
GABREP78334 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
GABREP78334 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
GABREP78334 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.55■■□□□ 1.68
GABREP78334 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
GABREP78334 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
GABREP78334 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
GABREP78334 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
GABREP78334 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.52■■□□□ 1.68
GABREP78334 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.52■■□□□ 1.68
GABREP78334 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.52■■□□□ 1.68
GABREP78334 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.5■■□□□ 1.67
GABREP78334 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
GABREP78334 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.49■■□□□ 1.67
GABREP78334 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
GABREP78334 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
GABREP78334 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
GABREP78334 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
GABREP78334 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.46■■□□□ 1.67
GABREP78334 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
GABREP78334 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
GABREP78334 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
GABREP78334 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
GABREP78334 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
GABREP78334 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
GABREP78334 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
GABREP78334 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
GABREP78334 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.42■■□□□ 1.66
GABREP78334 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
GABREP78334 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.41■■□□□ 1.66
GABREP78334 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
GABREP78334 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GABREP78334 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
GABREP78334 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GABREP78334 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GABREP78334 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
GABREP78334 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
GABREP78334 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.38■■□□□ 1.65
GABREP78334 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.38■■□□□ 1.65
GABREP78334 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
GABREP78334 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
GABREP78334 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.36■■□□□ 1.65
GABREP78334 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
GABREP78334 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.36■■□□□ 1.65
GABREP78334 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.36■■□□□ 1.65
GABREP78334 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
GABREP78334 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
GABREP78334 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
GABREP78334 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.34■■□□□ 1.65
GABREP78334 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
GABREP78334 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.33■■□□□ 1.65
GABREP78334 DUX4L13-201ENST00000554103 1267 ntBASIC25.33■■□□□ 1.65
GABREP78334 DUX4L15-201ENST00000611059 1267 ntBASIC25.33■■□□□ 1.65
GABREP78334 DUX4L23-201ENST00000615195 1269 ntBASIC25.33■■□□□ 1.65
GABREP78334 DUX4L24-201ENST00000617576 1269 ntBASIC25.33■■□□□ 1.65
GABREP78334 DUX4L22-201ENST00000618238 1269 ntBASIC25.33■■□□□ 1.65
GABREP78334 DUX4L20-201ENST00000619712 1269 ntBASIC25.33■■□□□ 1.65
GABREP78334 DUX4L21-201ENST00000622058 1269 ntBASIC25.33■■□□□ 1.65
GABREP78334 DUX4L10-201ENST00000622460 1267 ntBASIC25.33■■□□□ 1.65
GABREP78334 DUX4L25-201ENST00000624915 1269 ntBASIC25.33■■□□□ 1.65
GABREP78334 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms