Protein–RNA interactions for Protein: P49792

RANBP2, E3 SUMO-protein ligase RanBP2, humanhuman

Known RBP Predictions only

Length 3,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP2P49792 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.89■■■□□ 2.38
RANBP2P49792 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
RANBP2P49792 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RANBP2P49792 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RANBP2P49792 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
RANBP2P49792 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RANBP2P49792 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.86■■■□□ 2.37
RANBP2P49792 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
RANBP2P49792 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RANBP2P49792 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RANBP2P49792 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RANBP2P49792 RNF126P1-201ENST00000567452 1320 ntBASIC29.83■■■□□ 2.37
RANBP2P49792 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.81■■■□□ 2.36
RANBP2P49792 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.81■■■□□ 2.36
RANBP2P49792 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RANBP2P49792 MIR6090-201ENST00000622481 60 ntBASIC29.8■■■□□ 2.36
RANBP2P49792 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RANBP2P49792 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RANBP2P49792 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
RANBP2P49792 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.78■■■□□ 2.36
RANBP2P49792 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RANBP2P49792 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RANBP2P49792 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.77■■■□□ 2.36
RANBP2P49792 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RANBP2P49792 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RANBP2P49792 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
RANBP2P49792 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
RANBP2P49792 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RANBP2P49792 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.73■■■□□ 2.35
RANBP2P49792 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.73■■■□□ 2.35
RANBP2P49792 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
RANBP2P49792 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RANBP2P49792 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
RANBP2P49792 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.7■■■□□ 2.34
RANBP2P49792 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
RANBP2P49792 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RANBP2P49792 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.68■■■□□ 2.34
RANBP2P49792 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RANBP2P49792 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
RANBP2P49792 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L13-201ENST00000554103 1267 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L15-201ENST00000611059 1267 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L23-201ENST00000615195 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L24-201ENST00000617576 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L22-201ENST00000618238 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L20-201ENST00000619712 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L21-201ENST00000622058 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L10-201ENST00000622460 1267 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 DUX4L25-201ENST00000624915 1269 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 WASH5P-204ENST00000632292 975 ntBASIC29.67■■■□□ 2.34
RANBP2P49792 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.66■■■□□ 2.34
RANBP2P49792 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RANBP2P49792 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.65■■■□□ 2.34
RANBP2P49792 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RANBP2P49792 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
RANBP2P49792 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RANBP2P49792 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.62■■■□□ 2.33
RANBP2P49792 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RANBP2P49792 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.62■■■□□ 2.33
RANBP2P49792 NTF6A-201ENST00000591175 560 ntBASIC29.62■■■□□ 2.33
RANBP2P49792 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RANBP2P49792 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RANBP2P49792 AC018358.1-201ENST00000631079 1402 ntBASIC29.61■■■□□ 2.33
RANBP2P49792 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
RANBP2P49792 GPX1-201ENST00000419349 1106 ntBASIC29.57■■■□□ 2.32
RANBP2P49792 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.57■■■□□ 2.32
RANBP2P49792 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RANBP2P49792 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
RANBP2P49792 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RANBP2P49792 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
RANBP2P49792 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RANBP2P49792 AC012354.3-201ENST00000623734 483 ntBASIC29.54■■■□□ 2.32
RANBP2P49792 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RANBP2P49792 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RANBP2P49792 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.53■■■□□ 2.32
RANBP2P49792 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RANBP2P49792 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
RANBP2P49792 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RANBP2P49792 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
RANBP2P49792 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.51■■■□□ 2.31
RANBP2P49792 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RANBP2P49792 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RANBP2P49792 AC108673.1-201ENST00000510422 1159 ntBASIC29.5■■■□□ 2.31
RANBP2P49792 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.5■■■□□ 2.31
RANBP2P49792 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.5■■■□□ 2.31
RANBP2P49792 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.5■■■□□ 2.31
RANBP2P49792 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.49■■■□□ 2.31
RANBP2P49792 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RANBP2P49792 AC019069.1-201ENST00000610008 1333 ntBASIC29.48■■■□□ 2.31
RANBP2P49792 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
RANBP2P49792 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RANBP2P49792 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.45■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms