Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPDEFO95238 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
SPDEFO95238 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SPDEFO95238 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22.38■■□□□ 1.17
SPDEFO95238 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
SPDEFO95238 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SPDEFO95238 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.35■■□□□ 1.17
SPDEFO95238 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SPDEFO95238 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SPDEFO95238 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
SPDEFO95238 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.34■■□□□ 1.17
SPDEFO95238 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
SPDEFO95238 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.33■■□□□ 1.17
SPDEFO95238 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
SPDEFO95238 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.33■■□□□ 1.16
SPDEFO95238 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPDEFO95238 AC120057.4-201ENST00000624722 1615 ntBASIC22.3■■□□□ 1.16
SPDEFO95238 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPDEFO95238 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.3■■□□□ 1.16
SPDEFO95238 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPDEFO95238 AL031258.1-201ENST00000623562 325 ntBASIC22.29■■□□□ 1.16
SPDEFO95238 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPDEFO95238 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPDEFO95238 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPDEFO95238 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPDEFO95238 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPDEFO95238 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SPDEFO95238 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDEFO95238 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.27■■□□□ 1.16
SPDEFO95238 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPDEFO95238 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.26■■□□□ 1.15
SPDEFO95238 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPDEFO95238 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDEFO95238 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDEFO95238 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPDEFO95238 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.24■■□□□ 1.15
SPDEFO95238 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPDEFO95238 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPDEFO95238 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPDEFO95238 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPDEFO95238 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPDEFO95238 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SPDEFO95238 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.22■■□□□ 1.15
SPDEFO95238 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPDEFO95238 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPDEFO95238 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.2■■□□□ 1.14
SPDEFO95238 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.2■■□□□ 1.14
SPDEFO95238 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SPDEFO95238 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SPDEFO95238 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SPDEFO95238 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SPDEFO95238 AC142086.6-201ENST00000621154 1765 ntBASIC22.18■■□□□ 1.14
SPDEFO95238 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.18■■□□□ 1.14
SPDEFO95238 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SPDEFO95238 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPDEFO95238 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.17■■□□□ 1.14
SPDEFO95238 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC22.17■■□□□ 1.14
SPDEFO95238 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SPDEFO95238 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SPDEFO95238 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDEFO95238 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPDEFO95238 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SPDEFO95238 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.14■■□□□ 1.14
SPDEFO95238 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SPDEFO95238 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SPDEFO95238 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
SPDEFO95238 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SPDEFO95238 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC22.14■■□□□ 1.13
SPDEFO95238 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
SPDEFO95238 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SPDEFO95238 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPDEFO95238 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.13■■□□□ 1.13
SPDEFO95238 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SPDEFO95238 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SPDEFO95238 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPDEFO95238 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPDEFO95238 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPDEFO95238 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.11■■□□□ 1.13
SPDEFO95238 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPDEFO95238 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPDEFO95238 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SPDEFO95238 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.1■■□□□ 1.13
SPDEFO95238 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.09■■□□□ 1.13
SPDEFO95238 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SPDEFO95238 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SPDEFO95238 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SPDEFO95238 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SPDEFO95238 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SPDEFO95238 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SPDEFO95238 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.07■■□□□ 1.12
SPDEFO95238 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SPDEFO95238 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPDEFO95238 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPDEFO95238 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
SPDEFO95238 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SPDEFO95238 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPDEFO95238 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPDEFO95238 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPDEFO95238 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPDEFO95238 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms