Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
LOC285556D6RIA3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
LOC285556D6RIA3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.35■■■□□ 2.61
LOC285556D6RIA3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.35■■■□□ 2.61
LOC285556D6RIA3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LOC285556D6RIA3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LOC285556D6RIA3 AC108673.1-201ENST00000510422 1159 ntBASIC31.34■■■□□ 2.61
LOC285556D6RIA3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
LOC285556D6RIA3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.33■■■□□ 2.61
LOC285556D6RIA3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
LOC285556D6RIA3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
LOC285556D6RIA3 MIR4449-201ENST00000578365 66 ntBASIC31.31■■■□□ 2.6
LOC285556D6RIA3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
LOC285556D6RIA3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.3■■■□□ 2.6
LOC285556D6RIA3 MIR6090-201ENST00000622481 60 ntBASIC31.3■■■□□ 2.6
LOC285556D6RIA3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
LOC285556D6RIA3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.28■■■□□ 2.6
LOC285556D6RIA3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
LOC285556D6RIA3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.28■■■□□ 2.6
LOC285556D6RIA3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.27■■■□□ 2.6
LOC285556D6RIA3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
LOC285556D6RIA3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.25■■■□□ 2.59
LOC285556D6RIA3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.25■■■□□ 2.59
LOC285556D6RIA3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.25■■■□□ 2.59
LOC285556D6RIA3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LOC285556D6RIA3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
LOC285556D6RIA3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
LOC285556D6RIA3 CR559946.2-201ENST00000623684 991 ntBASIC31.24■■■□□ 2.59
LOC285556D6RIA3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LOC285556D6RIA3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LOC285556D6RIA3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LOC285556D6RIA3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LOC285556D6RIA3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LOC285556D6RIA3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.22■■■□□ 2.59
LOC285556D6RIA3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.21■■■□□ 2.59
LOC285556D6RIA3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.21■■■□□ 2.59
LOC285556D6RIA3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.59
LOC285556D6RIA3 MIR639-201ENST00000384974 98 ntBASIC31.2■■■□□ 2.58
LOC285556D6RIA3 AC016575.1-201ENST00000607026 382 ntBASIC31.19■■■□□ 2.58
LOC285556D6RIA3 MIR3648-2-201ENST00000581792 180 ntBASIC31.18■■■□□ 2.58
LOC285556D6RIA3 MIR3648-1-201ENST00000615959 180 ntBASIC31.18■■■□□ 2.58
LOC285556D6RIA3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.17■■■□□ 2.58
LOC285556D6RIA3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
LOC285556D6RIA3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.17■■■□□ 2.58
LOC285556D6RIA3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
LOC285556D6RIA3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
LOC285556D6RIA3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
LOC285556D6RIA3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
LOC285556D6RIA3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LOC285556D6RIA3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.12■■■□□ 2.57
LOC285556D6RIA3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LOC285556D6RIA3 LINC01971-201ENST00000617888 1048 ntBASIC31.12■■■□□ 2.57
LOC285556D6RIA3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.11■■■□□ 2.57
LOC285556D6RIA3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.11■■■□□ 2.57
LOC285556D6RIA3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
LOC285556D6RIA3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
LOC285556D6RIA3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.1■■■□□ 2.57
LOC285556D6RIA3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LOC285556D6RIA3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
LOC285556D6RIA3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.09■■■□□ 2.57
LOC285556D6RIA3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.08■■■□□ 2.57
LOC285556D6RIA3 DUX4L11-201ENST00000611504 1267 ntBASIC31.08■■■□□ 2.57
LOC285556D6RIA3 DUX4L12-201ENST00000614593 1267 ntBASIC31.08■■■□□ 2.57
LOC285556D6RIA3 DUX4L14-201ENST00000621227 1267 ntBASIC31.08■■■□□ 2.57
LOC285556D6RIA3 AC120057.4-201ENST00000624722 1615 ntBASIC31.07■■■□□ 2.56
LOC285556D6RIA3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LOC285556D6RIA3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LOC285556D6RIA3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LOC285556D6RIA3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
LOC285556D6RIA3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LOC285556D6RIA3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.05■■■□□ 2.56
LOC285556D6RIA3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.55
LOC285556D6RIA3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31■■■□□ 2.55
LOC285556D6RIA3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
LOC285556D6RIA3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31■■■□□ 2.55
LOC285556D6RIA3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
LOC285556D6RIA3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31■■■□□ 2.55
LOC285556D6RIA3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
LOC285556D6RIA3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
LOC285556D6RIA3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31■■■□□ 2.55
LOC285556D6RIA3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
LOC285556D6RIA3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
LOC285556D6RIA3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
LOC285556D6RIA3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.98■■■□□ 2.55
LOC285556D6RIA3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
LOC285556D6RIA3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
LOC285556D6RIA3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
LOC285556D6RIA3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
LOC285556D6RIA3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.97■■■□□ 2.55
LOC285556D6RIA3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
LOC285556D6RIA3 HSD17B1P1-201ENST00000590052 955 ntBASIC30.96■■■□□ 2.55
LOC285556D6RIA3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
LOC285556D6RIA3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
LOC285556D6RIA3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.95■■■□□ 2.54
LOC285556D6RIA3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
LOC285556D6RIA3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
LOC285556D6RIA3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
LOC285556D6RIA3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
LOC285556D6RIA3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.92■■■□□ 2.54
LOC285556D6RIA3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms